RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 PUS7Q96PZ0 661 aaKnown RBP8.73□□□□□ -1.01
PABPC1-204ENST00000517990 PSEN2P49810 448 aa8.72□□□□□ -1.01
PABPC1-204ENST00000517990 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-204ENST00000517990 AK7Q96M32 723 aa8.72□□□□□ -1.01
PABPC1-204ENST00000517990 CARD11Q9BXL7 1154 aa8.72□□□□□ -1.01
PABPC1-204ENST00000517990 SLC12A5Q9H2X9 1139 aa8.72□□□□□ -1.01
PABPC1-204ENST00000517990 CEP350Q5VT06 3117 aa8.72□□□□□ -1.01
PABPC1-204ENST00000517990 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-204ENST00000517990 HOXC9P31274 260 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 APLP1P51693 650 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 NEUROD1Q13562 356 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 PCDH11XQ9BZA7 1347 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 PCDH11YQ9BZA8 1340 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 A0A1W2PP64 1363 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 RTL1A6NKG5 1358 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 NSD2O96028 1365 aa8.71□□□□□ -1.02
PABPC1-204ENST00000517990 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
PABPC1-204ENST00000517990 C5P01031 1676 aa8.7□□□□□ -1.02
PABPC1-204ENST00000517990 MAP3K19Q56UN5 1328 aa8.7□□□□□ -1.02
PABPC1-204ENST00000517990 ADCY9O60503 1353 aa8.7□□□□□ -1.02
PABPC1-204ENST00000517990 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
PABPC1-204ENST00000517990 PALLDQ8WX93 1383 aa8.69□□□□□ -1.02
PABPC1-204ENST00000517990 SSFA2P28290 1259 aa8.68□□□□□ -1.02
PABPC1-204ENST00000517990 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
PABPC1-204ENST00000517990 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
PABPC1-204ENST00000517990 MEGF6O75095 1541 aa8.68□□□□□ -1.02
PABPC1-204ENST00000517990 TOMM70O94826 608 aa8.67□□□□□ -1.02
PABPC1-204ENST00000517990 PHF14O94880 888 aa8.67□□□□□ -1.02
PABPC1-204ENST00000517990 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
PABPC1-204ENST00000517990 SIN3AQ96ST3 1273 aa8.67□□□□□ -1.02
PABPC1-204ENST00000517990 TAF1LQ8IZX4 1826 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
PABPC1-204ENST00000517990 KIF3CO14782 793 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 NBPF6Q5VWK0 638 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 NBPF4Q96M43 638 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 RGPD2P0DJD1 1756 aa8.66□□□□□ -1.02
PABPC1-204ENST00000517990 KIF24Q5T7B8 1368 aa8.65□□□□□ -1.02
PABPC1-204ENST00000517990 TGFB2P61812 414 aa8.65□□□□□ -1.02
PABPC1-204ENST00000517990 USHBP1Q8N6Y0 703 aa8.65□□□□□ -1.02
PABPC1-204ENST00000517990 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
PABPC1-204ENST00000517990 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
PABPC1-204ENST00000517990 PCDHGA4Q9Y5G9 962 aa8.65□□□□□ -1.02
PABPC1-204ENST00000517990 INSRP06213 1382 aa8.64□□□□□ -1.03
PABPC1-204ENST00000517990 FLT4P35916 1363 aa8.64□□□□□ -1.03
PABPC1-204ENST00000517990 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
PABPC1-204ENST00000517990 SIK1P57059 783 aa8.64□□□□□ -1.03
PABPC1-204ENST00000517990 RRS1Q15050 365 aaKnown RBP8.64□□□□□ -1.03
PABPC1-204ENST00000517990 BCS1LQ9Y276 419 aa8.64□□□□□ -1.03
PABPC1-204ENST00000517990 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
PABPC1-204ENST00000517990 TONSLQ96HA7 1378 aa8.63□□□□□ -1.03
PABPC1-204ENST00000517990 GNPATO15228 680 aa8.63□□□□□ -1.03
PABPC1-204ENST00000517990 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
PABPC1-204ENST00000517990 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
PABPC1-204ENST00000517990 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
PABPC1-204ENST00000517990 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 ITGB4P16144 1822 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 CYP27B1O15528 508 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 MMP10P09238 476 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 FBLN1P23142 703 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 FSTL1Q12841 308 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 TRAPPC3LQ5T215 181 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 ARHGAP27Q6ZUM4 889 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 NLGN1Q8N2Q7 840 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
PABPC1-204ENST00000517990 PIGBQ92521 554 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 GGNBP2Q9H3C7 697 aa8.62□□□□□ -1.03
PABPC1-204ENST00000517990 RTCBQ9Y3I0 505 aaKnown RBP8.62□□□□□ -1.03
PABPC1-204ENST00000517990 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-204ENST00000517990 FYB1O15117 783 aa8.61□□□□□ -1.03
PABPC1-204ENST00000517990 FCHSD2O94868 740 aa8.61□□□□□ -1.03
PABPC1-204ENST00000517990 TMF1P82094 1093 aa8.61□□□□□ -1.03
PABPC1-204ENST00000517990 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-204ENST00000517990 HSP90AB2PQ58FF8 381 aa8.61□□□□□ -1.03
PABPC1-204ENST00000517990 IFNL2Q8IZJ0 200 aa8.61□□□□□ -1.03
PABPC1-204ENST00000517990 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
PABPC1-204ENST00000517990 ST20-MTHFSA0A0A6YYL1 179 aa8.6□□□□□ -1.03
PABPC1-204ENST00000517990 DNAJC5GQ8N7S2 189 aa8.6□□□□□ -1.03
PABPC1-204ENST00000517990 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
PABPC1-204ENST00000517990 KLRG1Q96E93 195 aa8.6□□□□□ -1.03
PABPC1-204ENST00000517990 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 A0A0G2JLW4 131 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
PABPC1-204ENST00000517990 RFC4P35249 363 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 NMRK2Q9NPI5 230 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 PKD1L3Q7Z443 1732 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 WDR90Q96KV7 1748 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 TOGARAM1Q9Y4F4 1720 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 KIF13BQ9NQT8 1826 aa8.59□□□□□ -1.03
PABPC1-204ENST00000517990 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-204ENST00000517990 HSP90AB1P08238 724 aaKnown RBP8.58□□□□□ -1.04
PABPC1-204ENST00000517990 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
PABPC1-204ENST00000517990 C9orf131Q5VYM1 1079 aa8.58□□□□□ -1.04
PABPC1-204ENST00000517990 AMIGO3Q86WK7 504 aa8.58□□□□□ -1.04
PABPC1-204ENST00000517990 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms