RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 MMP10P09238 476 aa7.49□□□□□ -1.21
CDH12P3-201ENST00000517935 LMNB1P20700 586 aa7.49□□□□□ -1.21
CDH12P3-201ENST00000517935 KCNA3P22001 575 aa7.49□□□□□ -1.21
CDH12P3-201ENST00000517935 SSFA2P28290 1259 aa7.49□□□□□ -1.21
CDH12P3-201ENST00000517935 LHX8Q68G74 356 aa7.49□□□□□ -1.21
CDH12P3-201ENST00000517935 BOLA1Q9Y3E2 137 aa7.49□□□□□ -1.21
CDH12P3-201ENST00000517935 N4BP2Q86UW6 1770 aaPredicted RBP7.48□□□□□ -1.21
CDH12P3-201ENST00000517935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.48□□□□□ -1.21
CDH12P3-201ENST00000517935 BRCA1P38398 1863 aaKnown RBP7.48□□□□□ -1.21
CDH12P3-201ENST00000517935 AK7Q96M32 723 aa7.48□□□□□ -1.21
CDH12P3-201ENST00000517935 ERBB3P21860 1342 aa7.48□□□□□ -1.21
CDH12P3-201ENST00000517935 SZT2Q5T011 3432 aa7.48□□□□□ -1.21
CDH12P3-201ENST00000517935 SBF1O95248 1867 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 POTEB2H3BUK9 544 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 FXR1P51114 621 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 DGKZQ13574 1117 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 MAMSTRQ6ZN01 415 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 NLGN1Q8N2Q7 840 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 DDX54Q8TDD1 881 aaKnown RBP7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 CCDC87Q9NVE4 849 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 NLRP2Q9NX02 1062 aa7.47□□□□□ -1.21
CDH12P3-201ENST00000517935 ADGRB1O14514 1584 aa7.46□□□□□ -1.21
CDH12P3-201ENST00000517935 THSD7BQ9C0I4 1608 aa7.46□□□□□ -1.21
CDH12P3-201ENST00000517935 COL6A3P12111 3177 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 PPP1R37O75864 691 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 ECE1P42892 770 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 LDHDQ86WU2 507 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 SLC17A8Q8NDX2 589 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 CDK19Q9BWU1 502 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 KAT6BQ8WYB5 2073 aa7.46□□□□□ -1.22
CDH12P3-201ENST00000517935 C4BP0C0L5 1744 aa7.45□□□□□ -1.22
CDH12P3-201ENST00000517935 ITGBL1O95965 494 aaPredicted RBP7.45□□□□□ -1.22
CDH12P3-201ENST00000517935 SOX10P56693 466 aa7.45□□□□□ -1.22
CDH12P3-201ENST00000517935 C3orf67Q6ZVT6 689 aa7.45□□□□□ -1.22
CDH12P3-201ENST00000517935 AMIGO3Q86WK7 504 aa7.45□□□□□ -1.22
CDH12P3-201ENST00000517935 SCUBE2Q9NQ36 999 aa7.45□□□□□ -1.22
CDH12P3-201ENST00000517935 RGPD5Q99666 1765 aa7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 PHF14O94880 888 aa7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 MAP2K2P36507 400 aa7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 SMIM5Q71RC9 77 aa7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 MICALL2Q8IY33 904 aa7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 GPR101Q96P66 508 aaPredicted RBP7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 TOGARAM1Q9Y4F4 1720 aa7.44□□□□□ -1.22
CDH12P3-201ENST00000517935 TAF1LQ8IZX4 1826 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 UBR3Q6ZT12 1888 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 POTEJP0CG39 1038 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 TMF1P82094 1093 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 PLCB2Q00722 1185 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 ADAMTS7Q9UKP4 1686 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 DOT1LQ8TEK3 1739 aa7.43□□□□□ -1.22
CDH12P3-201ENST00000517935 LTBP1Q14766 1721 aa7.42□□□□□ -1.22
CDH12P3-201ENST00000517935 SMARCC1Q92922 1105 aaPredicted RBP7.42□□□□□ -1.22
CDH12P3-201ENST00000517935 CAPNS2Q96L46 248 aa7.42□□□□□ -1.22
CDH12P3-201ENST00000517935 TMEM121BQ9BXQ6 578 aaPredicted RBP7.42□□□□□ -1.22
CDH12P3-201ENST00000517935 PALLDQ8WX93 1383 aa7.42□□□□□ -1.22
CDH12P3-201ENST00000517935 ABT1Q9ULW3 272 aaKnown RBP7.41□□□□□ -1.22
CDH12P3-201ENST00000517935 PARP3Q9Y6F1 533 aa7.41□□□□□ -1.22
CDH12P3-201ENST00000517935 NFAT5O94916 1531 aa7.41□□□□□ -1.22
CDH12P3-201ENST00000517935 C4AP0C0L4 1744 aa7.41□□□□□ -1.22
CDH12P3-201ENST00000517935 TIAM2Q8IVF5 1701 aa7.41□□□□□ -1.22
CDH12P3-201ENST00000517935 RASSF7Q02833 373 aa7.4□□□□□ -1.22
CDH12P3-201ENST00000517935 ZCRB1Q8TBF4 217 aaKnown RBP7.4□□□□□ -1.22
CDH12P3-201ENST00000517935 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
CDH12P3-201ENST00000517935 BRPF1P55201 1214 aaPredicted RBP7.39□□□□□ -1.23
CDH12P3-201ENST00000517935 MKI67P46013 3256 aaKnown RBP7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 UNC80Q8N2C7 3258 aa7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 GNPATO15228 680 aa7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 TRAPPC3LQ5T215 181 aa7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 OTUD5Q96G74 571 aa7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 TAF1DQ9H5J8 278 aaPredicted RBP7.38□□□□□ -1.23
CDH12P3-201ENST00000517935 ERFEQ4G0M1 354 aa7.37□□□□□ -1.23
CDH12P3-201ENST00000517935 PNMA8AQ86V59 439 aaPredicted RBP7.37□□□□□ -1.23
CDH12P3-201ENST00000517935 CNTROBQ8N137 903 aa7.37□□□□□ -1.23
CDH12P3-201ENST00000517935 SLAIN1Q8ND83 568 aa7.37□□□□□ -1.23
CDH12P3-201ENST00000517935 RANBP2P49792 3224 aaKnown RBP7.37□□□□□ -1.23
CDH12P3-201ENST00000517935 SCN4AP35499 1836 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 CGNL1Q0VF96 1302 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 TTC21AQ8NDW8 1320 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 GYS1P13807 737 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 CHRNA5P30532 468 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 ITGAEP38570 1179 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 NBPF1Q3BBV0 1214 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 LINC00116Q8NCU8 138 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 TMC2Q8TDI7 906 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 CASP8AP2Q9UKL3 1982 aa7.36□□□□□ -1.23
CDH12P3-201ENST00000517935 LOC102724428A0A0B4J2F2 783 aa7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 NFKBIEO00221 500 aa7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 DDNO94850 711 aaPredicted RBP7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 SIK1P57059 783 aa7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 CYP4F22Q6NT55 531 aa7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 HHIPL1Q96JK4 782 aa7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 STAC3Q96MF2 364 aa7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 DDX21Q9NR30 783 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 RTCBQ9Y3I0 505 aaKnown RBP7.35□□□□□ -1.23
CDH12P3-201ENST00000517935 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms