RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
RBM47-215ENST00000515809 NBPF14Q5TI25 921 aa18.33■□□□□ 0.52
RBM47-215ENST00000515809 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
RBM47-215ENST00000515809 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
RBM47-215ENST00000515809 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
RBM47-215ENST00000515809 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
RBM47-215ENST00000515809 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
RBM47-215ENST00000515809 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
RBM47-215ENST00000515809 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
RBM47-215ENST00000515809 KRT24Q2M2I5 525 aa18.31■□□□□ 0.52
RBM47-215ENST00000515809 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
RBM47-215ENST00000515809 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
RBM47-215ENST00000515809 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
RBM47-215ENST00000515809 EXOSC9Q06265 439 aaKnown RBP18.3■□□□□ 0.52
RBM47-215ENST00000515809 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
RBM47-215ENST00000515809 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
RBM47-215ENST00000515809 SCN7AQ01118 1682 aa18.3■□□□□ 0.52
RBM47-215ENST00000515809 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
RBM47-215ENST00000515809 GNPATO15228 680 aa18.29■□□□□ 0.52
RBM47-215ENST00000515809 TRMT2AQ8IZ69 625 aaKnown RBP18.29■□□□□ 0.52
RBM47-215ENST00000515809 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
RBM47-215ENST00000515809 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
RBM47-215ENST00000515809 ELL2O00472 640 aaPredicted RBP18.28■□□□□ 0.52
RBM47-215ENST00000515809 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
RBM47-215ENST00000515809 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
RBM47-215ENST00000515809 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.52
RBM47-215ENST00000515809 SLC15A2Q16348 729 aa18.27■□□□□ 0.52
RBM47-215ENST00000515809 CCDC30Q5VVM6 783 aa18.27■□□□□ 0.52
RBM47-215ENST00000515809 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
RBM47-215ENST00000515809 ANO8Q9HCE9 1232 aaPredicted RBP18.27■□□□□ 0.52
RBM47-215ENST00000515809 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
RBM47-215ENST00000515809 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.52
RBM47-215ENST00000515809 COL15A1P39059 1388 aa18.27■□□□□ 0.51
RBM47-215ENST00000515809 CASZ1Q86V15 1759 aa18.27■□□□□ 0.51
RBM47-215ENST00000515809 ZNF827Q17R98 1081 aa18.26■□□□□ 0.51
RBM47-215ENST00000515809 TSPYL6Q8N831 410 aa18.26■□□□□ 0.51
RBM47-215ENST00000515809 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
RBM47-215ENST00000515809 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
RBM47-215ENST00000515809 ADRA2BP18089 450 aa18.25■□□□□ 0.51
RBM47-215ENST00000515809 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
RBM47-215ENST00000515809 SSFA2P28290 1259 aa18.25■□□□□ 0.51
RBM47-215ENST00000515809 INTS5Q6P9B9 1019 aaKnown RBP18.25■□□□□ 0.51
RBM47-215ENST00000515809 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
RBM47-215ENST00000515809 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
RBM47-215ENST00000515809 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
RBM47-215ENST00000515809 A1BGP04217 495 aa18.24■□□□□ 0.51
RBM47-215ENST00000515809 IL6STP40189 918 aaPredicted RBP18.24■□□□□ 0.51
RBM47-215ENST00000515809 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
RBM47-215ENST00000515809 DBF4Q9UBU7 674 aaPredicted RBP18.24■□□□□ 0.51
RBM47-215ENST00000515809 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
RBM47-215ENST00000515809 ANKRD36CQ5JPF3 1778 aa18.24■□□□□ 0.51
RBM47-215ENST00000515809 ARFGEF2Q9Y6D5 1785 aa18.24■□□□□ 0.51
RBM47-215ENST00000515809 A0A087WZG4 1122 aa18.23■□□□□ 0.51
RBM47-215ENST00000515809 VAMP4O75379 141 aa18.23■□□□□ 0.51
RBM47-215ENST00000515809 PHF14O94880 888 aa18.23■□□□□ 0.51
RBM47-215ENST00000515809 MYL6BP14649 208 aa18.22■□□□□ 0.51
RBM47-215ENST00000515809 DDX21Q9NR30 783 aaKnown RBP eCLIP18.22■□□□□ 0.51
RBM47-215ENST00000515809 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
RBM47-215ENST00000515809 NUP98P52948 1817 aa18.21■□□□□ 0.51
RBM47-215ENST00000515809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
RBM47-215ENST00000515809 HYPKQ9NX55 129 aa18.21■□□□□ 0.51
RBM47-215ENST00000515809 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
RBM47-215ENST00000515809 NBPF26B4DH59 902 aa18.2■□□□□ 0.5
RBM47-215ENST00000515809 PIP4K2AP48426 406 aaPredicted RBP18.2■□□□□ 0.5
RBM47-215ENST00000515809 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
RBM47-215ENST00000515809 NBPF10Q6P3W6 841 aaKnown RBP18.2■□□□□ 0.5
RBM47-215ENST00000515809 NBPF15Q8N660 670 aa18.2■□□□□ 0.5
RBM47-215ENST00000515809 MSH5O43196 834 aa18.19■□□□□ 0.5
RBM47-215ENST00000515809 RFC4P35249 363 aa18.19■□□□□ 0.5
RBM47-215ENST00000515809 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
RBM47-215ENST00000515809 KIF6Q6ZMV9 814 aa18.19■□□□□ 0.5
RBM47-215ENST00000515809 R3HDM1Q15032 1099 aaKnown RBP18.18■□□□□ 0.5
RBM47-215ENST00000515809 PDIA6Q15084 440 aa18.18■□□□□ 0.5
RBM47-215ENST00000515809 ALDH1L2Q3SY69 923 aa18.18■□□□□ 0.5
RBM47-215ENST00000515809 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
RBM47-215ENST00000515809 AFDNP55196 1824 aaKnown RBP18.17■□□□□ 0.5
RBM47-215ENST00000515809 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
RBM47-215ENST00000515809 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
RBM47-215ENST00000515809 ARXQ96QS3 562 aa18.17■□□□□ 0.5
RBM47-215ENST00000515809 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
RBM47-215ENST00000515809 N4BP2Q86UW6 1770 aaPredicted RBP18.17■□□□□ 0.5
RBM47-215ENST00000515809 ZPR1O75312 459 aa18.16■□□□□ 0.5
RBM47-215ENST00000515809 ANXA1P04083 346 aa18.16■□□□□ 0.5
RBM47-215ENST00000515809 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
RBM47-215ENST00000515809 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
RBM47-215ENST00000515809 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
RBM47-215ENST00000515809 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
RBM47-215ENST00000515809 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
RBM47-215ENST00000515809 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
RBM47-215ENST00000515809 AMIGO3Q86WK7 504 aa18.15■□□□□ 0.5
RBM47-215ENST00000515809 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
RBM47-215ENST00000515809 NARFQ9UHQ1 456 aa18.15■□□□□ 0.5
RBM47-215ENST00000515809 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
RBM47-215ENST00000515809 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
RBM47-215ENST00000515809 LRP10Q7Z4F1 713 aa18.14■□□□□ 0.49
RBM47-215ENST00000515809 SLC16A10Q8TF71 515 aa18.14■□□□□ 0.49
RBM47-215ENST00000515809 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
RBM47-215ENST00000515809 RGL2O15211 777 aa18.13■□□□□ 0.49
RBM47-215ENST00000515809 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
RBM47-215ENST00000515809 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms