RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
TPM3-222ENST00000515609 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
TPM3-222ENST00000515609 KCNQ3O43525 872 aa11.91□□□□□ -0.5
TPM3-222ENST00000515609 KSR2Q6VAB6 950 aa11.91□□□□□ -0.5
TPM3-222ENST00000515609 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
TPM3-222ENST00000515609 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
TPM3-222ENST00000515609 SRCIN1Q9C0H9 1055 aa11.91□□□□□ -0.5
TPM3-222ENST00000515609 BCL9O00512 1426 aa11.91□□□□□ -0.5
TPM3-222ENST00000515609 IBTKQ9P2D0 1353 aaPredicted RBP11.91□□□□□ -0.5
TPM3-222ENST00000515609 AFF2P51816 1311 aa11.9□□□□□ -0.5
TPM3-222ENST00000515609 ALDH1L1O75891 902 aa11.9□□□□□ -0.5
TPM3-222ENST00000515609 FAM98CQ17RN3 349 aaKnown RBP11.9□□□□□ -0.5
TPM3-222ENST00000515609 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
TPM3-222ENST00000515609 SYTL4Q96C24 671 aaPredicted RBP11.9□□□□□ -0.5
TPM3-222ENST00000515609 SHANK3Q9BYB0 1731 aa11.9□□□□□ -0.5
TPM3-222ENST00000515609 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
TPM3-222ENST00000515609 ZNF772Q68DY9 489 aaPredicted RBP11.89□□□□□ -0.51
TPM3-222ENST00000515609 PIGBQ92521 554 aa11.89□□□□□ -0.51
TPM3-222ENST00000515609 GCC1Q96CN9 775 aa11.89□□□□□ -0.51
TPM3-222ENST00000515609 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
TPM3-222ENST00000515609 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
TPM3-222ENST00000515609 GNAI2P04899 355 aa11.88□□□□□ -0.51
TPM3-222ENST00000515609 G2E3Q7L622 706 aa11.88□□□□□ -0.51
TPM3-222ENST00000515609 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
TPM3-222ENST00000515609 TNNQ9UQP3 1299 aa11.88□□□□□ -0.51
TPM3-222ENST00000515609 RGS12O14924 1447 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 PAPPAQ13219 1627 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
TPM3-222ENST00000515609 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
TPM3-222ENST00000515609 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
TPM3-222ENST00000515609 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 UBR2Q8IWV8 1755 aa11.87□□□□□ -0.51
TPM3-222ENST00000515609 ATRNO75882 1429 aa11.86□□□□□ -0.51
TPM3-222ENST00000515609 MARCH10Q8NA82 808 aaPredicted RBP11.86□□□□□ -0.51
TPM3-222ENST00000515609 PLBD2Q8NHP8 589 aa11.86□□□□□ -0.51
TPM3-222ENST00000515609 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
TPM3-222ENST00000515609 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
TPM3-222ENST00000515609 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
TPM3-222ENST00000515609 F6X3S4 739 aa11.85□□□□□ -0.51
TPM3-222ENST00000515609 MYL6BP14649 208 aa11.85□□□□□ -0.51
TPM3-222ENST00000515609 QTRT2Q9H974 415 aaKnown RBP11.85□□□□□ -0.51
TPM3-222ENST00000515609 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
TPM3-222ENST00000515609 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
TPM3-222ENST00000515609 MAP3K2Q9Y2U5 619 aa11.85□□□□□ -0.51
TPM3-222ENST00000515609 USP16Q9Y5T5 823 aa11.85□□□□□ -0.51
TPM3-222ENST00000515609 KCPQ6ZWJ8 1503 aa11.85□□□□□ -0.51
TPM3-222ENST00000515609 PDIA6Q15084 440 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 BEND3Q5T5X7 828 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 SMC5Q8IY18 1101 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
TPM3-222ENST00000515609 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
TPM3-222ENST00000515609 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
TPM3-222ENST00000515609 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
TPM3-222ENST00000515609 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
TPM3-222ENST00000515609 IGHDP01880 384 aa11.83□□□□□ -0.52
TPM3-222ENST00000515609 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
TPM3-222ENST00000515609 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
TPM3-222ENST00000515609 ITGB4P16144 1822 aa11.83□□□□□ -0.52
TPM3-222ENST00000515609 ADCY9O60503 1353 aa11.82□□□□□ -0.52
TPM3-222ENST00000515609 THSD7AQ9UPZ6 1657 aa11.82□□□□□ -0.52
TPM3-222ENST00000515609 MEIS3Q99687 375 aa11.82□□□□□ -0.52
TPM3-222ENST00000515609 DOT1LQ8TEK3 1739 aa11.82□□□□□ -0.52
TPM3-222ENST00000515609 C5P01031 1676 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 LOC102724428A0A0B4J2F2 783 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
TPM3-222ENST00000515609 IL6STP40189 918 aaPredicted RBP11.81□□□□□ -0.52
TPM3-222ENST00000515609 SIK1P57059 783 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 RBM6P78332 1123 aaKnown RBP11.81□□□□□ -0.52
TPM3-222ENST00000515609 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 SEPT12Q8IYM1 358 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 FBXO41Q8TF61 875 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 USP44Q9H0E7 712 aa11.81□□□□□ -0.52
TPM3-222ENST00000515609 PALLDQ8WX93 1383 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 A0A087WZG4 1122 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 GRM8O00222 908 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 RGL2O15211 777 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 ANXA1P04083 346 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
TPM3-222ENST00000515609 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 DCTPP1Q9H773 170 aa11.8□□□□□ -0.52
TPM3-222ENST00000515609 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
TPM3-222ENST00000515609 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
TPM3-222ENST00000515609 A1BGP04217 495 aa11.79□□□□□ -0.52
TPM3-222ENST00000515609 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
TPM3-222ENST00000515609 NUCB1Q02818 461 aa11.79□□□□□ -0.52
TPM3-222ENST00000515609 LRP10Q7Z4F1 713 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms