RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
PDLIM5-220ENST00000514830 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
PDLIM5-220ENST00000514830 C4BP0C0L5 1744 aa15.44■□□□□ 0.06
PDLIM5-220ENST00000514830 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
PDLIM5-220ENST00000514830 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-220ENST00000514830 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
PDLIM5-220ENST00000514830 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
PDLIM5-220ENST00000514830 BRPF1P55201 1214 aaPredicted RBP15.43■□□□□ 0.06
PDLIM5-220ENST00000514830 QSER1Q2KHR3 1735 aa15.43■□□□□ 0.06
PDLIM5-220ENST00000514830 STARD3NLO95772 234 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 CYP19A1P11511 503 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 ITPK1Q13572 414 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 PROM2Q8N271 834 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 UBR3Q6ZT12 1888 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 CNTNAP4Q9C0A0 1308 aa15.42■□□□□ 0.06
PDLIM5-220ENST00000514830 PRAMEF22A3QJZ6 481 aa15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 TXNRD1Q16881 649 aa15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 DNAJC10Q8IXB1 793 aa15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 PPP1R1BQ9UD71 204 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
PDLIM5-220ENST00000514830 ELL2O00472 640 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-220ENST00000514830 EZH2Q15910 746 aaKnown RBP15.4■□□□□ 0.06
PDLIM5-220ENST00000514830 LRRC4BQ9NT99 713 aa15.4■□□□□ 0.06
PDLIM5-220ENST00000514830 RARSP54136 660 aaKnown RBP15.39■□□□□ 0.05
PDLIM5-220ENST00000514830 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDLIM5-220ENST00000514830 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
PDLIM5-220ENST00000514830 PDIA6Q15084 440 aa15.38■□□□□ 0.05
PDLIM5-220ENST00000514830 LINC00116Q8NCU8 138 aa15.38■□□□□ 0.05
PDLIM5-220ENST00000514830 CCDC87Q9NVE4 849 aa15.38■□□□□ 0.05
PDLIM5-220ENST00000514830 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
PDLIM5-220ENST00000514830 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 YY1P25490 414 aa15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 CRKLP46109 303 aaKnown RBP15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 INTS5Q6P9B9 1019 aaKnown RBP15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
PDLIM5-220ENST00000514830 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 IL6STP40189 918 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 MRPL50Q8N5N7 158 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-220ENST00000514830 C4AP0C0L4 1744 aa15.35■□□□□ 0.05
PDLIM5-220ENST00000514830 BCORQ6W2J9 1755 aa15.35■□□□□ 0.05
PDLIM5-220ENST00000514830 SPON1Q9HCB6 807 aa15.35■□□□□ 0.05
PDLIM5-220ENST00000514830 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
PDLIM5-220ENST00000514830 RPS6KA4O75676 772 aa15.34■□□□□ 0.05
PDLIM5-220ENST00000514830 A1BGP04217 495 aa15.34■□□□□ 0.05
PDLIM5-220ENST00000514830 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
PDLIM5-220ENST00000514830 EIF5P55010 431 aaKnown RBP15.34■□□□□ 0.05
PDLIM5-220ENST00000514830 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
PDLIM5-220ENST00000514830 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
PDLIM5-220ENST00000514830 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 RGL2O15211 777 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 ADRA2BP18089 450 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 KCNQ4P56696 695 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 ARHGAP45Q92619 1136 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 SMC4Q9NTJ3 1288 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 PTPRCP08575 1304 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
PDLIM5-220ENST00000514830 NUP98P52948 1817 aa15.32■□□□□ 0.04
PDLIM5-220ENST00000514830 PROSER3Q2NL68 480 aa15.32■□□□□ 0.04
PDLIM5-220ENST00000514830 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
PDLIM5-220ENST00000514830 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
PDLIM5-220ENST00000514830 BCAR3O75815 825 aa15.31■□□□□ 0.04
PDLIM5-220ENST00000514830 SSFA2P28290 1259 aa15.31■□□□□ 0.04
PDLIM5-220ENST00000514830 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
PDLIM5-220ENST00000514830 COL15A1P39059 1388 aa15.31■□□□□ 0.04
PDLIM5-220ENST00000514830 A0A087WZG4 1122 aa15.3■□□□□ 0.04
PDLIM5-220ENST00000514830 PXDNLA1KZ92 1463 aa15.3■□□□□ 0.04
PDLIM5-220ENST00000514830 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-220ENST00000514830 FLIIQ13045 1269 aa15.3■□□□□ 0.04
PDLIM5-220ENST00000514830 AK7Q96M32 723 aa15.3■□□□□ 0.04
PDLIM5-220ENST00000514830 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-220ENST00000514830 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 GNPATO15228 680 aa15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 MYL6BP14649 208 aa15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 G2E3Q7L622 706 aa15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-220ENST00000514830 ERVV-1B6SEH8 477 aa15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 ANXA1P04083 346 aa15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 ZNF827Q17R98 1081 aa15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 COPS6Q7L5N1 327 aa15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.28■□□□□ 0.04
PDLIM5-220ENST00000514830 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms