RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 MAFBQ9Y5Q3 323 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-223ENST00000514267 HIRAP54198 1017 aaPredicted RBP6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 PSMA6P60900 246 aaKnown RBP6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 RNFT1Q5M7Z0 435 aa6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 TFIP11Q9UBB9 837 aaKnown RBP6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 GJA3Q9Y6H8 435 aa6.36□□□□□ -1.39
CALCOCO2-223ENST00000514267 PIK3R2O00459 728 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 RASA1P20936 1047 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 SEC13P55735 322 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 FOXK2Q01167 660 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 LAMC2Q13753 1193 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 GAS6Q14393 721 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 ARSJQ5FYB0 599 aaPredicted RBP6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 SAMD5Q5TGI4 173 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 C1orf53Q5VUE5 145 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 STAG2Q8N3U4 1231 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 AIDAQ96BJ3 306 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 PCDHGC4Q9Y5F7 938 aa6.35□□□□□ -1.39
CALCOCO2-223ENST00000514267 IGF1RP08069 1367 aa6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 SERTM1A2A2V5 107 aa6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 FAM196BA6NMK8 535 aa6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 ZNF385CQ66K41 422 aaPredicted RBP6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 SCARF2Q96GP6 870 aaPredicted RBP6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 RUBCNLQ9H714 662 aa6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 NEUROD4Q9HD90 331 aa6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 AVENQ9NQS1 362 aaPredicted RBP6.34□□□□□ -1.39
CALCOCO2-223ENST00000514267 FAM157BP0CG42 384 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 BCRP11274 1271 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 ATP4AP20648 1035 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 EPHA4P54764 986 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 MARSP56192 900 aaKnown RBP6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 CLDN10P78369 228 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 FAM182BQ5T319 152 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 BICDL1Q6ZP65 573 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 PODNQ7Z5L7 613 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 SLC9A9Q8IVB4 645 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 GOLGA6L1Q8N7Z2 621 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 VRTNQ9H8Y1 702 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 ANKIB1Q9P2G1 1089 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 ZNF232Q9UNY5 417 aa6.33□□□□□ -1.4
CALCOCO2-223ENST00000514267 A0A1W2PNR3 127 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 PHF20L1A8MW92 1017 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 ATXN7O15265 892 aaPredicted RBP6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 BMP4P12644 408 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 FGFR3P22607 806 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 NOS2P35228 1153 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 KANK3Q6NY19 840 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 ZNF295-AS1Q8N0V1 137 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 L3MBTL2Q969R5 705 aa6.32□□□□□ -1.4
CALCOCO2-223ENST00000514267 GPR25O00155 361 aa6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 ZBTB7BO15156 539 aaPredicted RBP6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 STAU1O95793 577 aaKnown RBP6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 POTEAQ6S8J7 498 aa6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 ZNF594Q96JF6 807 aaPredicted RBP6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 OXCT2Q9BYC2 517 aaPredicted RBP6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 NDFIP2Q9NV92 336 aa6.31□□□□□ -1.4
CALCOCO2-223ENST00000514267 EML1O00423 815 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 ARHGEF15O94989 841 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 CELA2BP08218 269 aaPredicted RBP6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 ARAFP10398 606 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 KCNMA1Q12791 1236 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 NEUROD1Q13562 356 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 UBAP2LQ14157 1087 aaKnown RBP6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 ALYREFQ86V81 257 aaKnown RBP6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 RHPN1Q8TCX5 695 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 ZCCHC2Q9C0B9 1178 aaKnown RBP6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 C1orf115Q9H7X2 142 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 ADAMTS8Q9UP79 889 aa6.3□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L15C9J2P7 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L10C9JJH3 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L13C9JLJ4 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L11C9JVI0 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L21D6R901 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L18D6R9N7 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L22D6RA61 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L17D6RBQ6 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L19D6RCP7 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L20D6RJB6 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 PPP1R12BO60237 982 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 LMOD1P29536 600 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 USP17L24Q0WX57 530 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 PTK7Q13308 1070 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 KANK4Q5T7N3 995 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 SLCO4C1Q6ZQN7 724 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 TNS4Q8IZW8 715 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 BEND7Q8N7W2 519 aaPredicted RBP6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 NEDD1Q8NHV4 660 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 ZIC5Q96T25 663 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 EFCC1Q9HA90 598 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
CALCOCO2-223ENST00000514267 OIP5O43482 229 aa6.28□□□□□ -1.4
CALCOCO2-223ENST00000514267 IGFBP4P22692 258 aa6.28□□□□□ -1.4
CALCOCO2-223ENST00000514267 ADH6P28332 368 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms