RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 VIRMAQ69YN4 1812 aaKnown RBP11.63□□□□□ -0.55
HERC4-214ENST00000513996 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
HERC4-214ENST00000513996 ZBTB1Q9Y2K1 713 aa11.62□□□□□ -0.55
HERC4-214ENST00000513996 CD2APQ9Y5K6 639 aa11.62□□□□□ -0.55
HERC4-214ENST00000513996 TJP1Q07157 1748 aa11.62□□□□□ -0.55
HERC4-214ENST00000513996 SOS1Q07889 1333 aaPredicted RBP11.61□□□□□ -0.55
HERC4-214ENST00000513996 BTBD11A6QL63 1104 aa11.61□□□□□ -0.55
HERC4-214ENST00000513996 HTATSF1O43719 755 aaKnown RBP11.61□□□□□ -0.55
HERC4-214ENST00000513996 FKBP8Q14318 412 aa11.61□□□□□ -0.55
HERC4-214ENST00000513996 GPR162Q16538 588 aa11.61□□□□□ -0.55
HERC4-214ENST00000513996 TTC5Q8N0Z6 440 aa11.61□□□□□ -0.55
HERC4-214ENST00000513996 NLGN1Q8N2Q7 840 aa11.61□□□□□ -0.55
HERC4-214ENST00000513996 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
HERC4-214ENST00000513996 PRAMEF22A3QJZ6 481 aa11.6□□□□□ -0.55
HERC4-214ENST00000513996 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
HERC4-214ENST00000513996 YY1P25490 414 aa11.6□□□□□ -0.55
HERC4-214ENST00000513996 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
HERC4-214ENST00000513996 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
HERC4-214ENST00000513996 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
HERC4-214ENST00000513996 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
HERC4-214ENST00000513996 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
HERC4-214ENST00000513996 CANXP27824 592 aaKnown RBP11.59□□□□□ -0.55
HERC4-214ENST00000513996 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
HERC4-214ENST00000513996 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
HERC4-214ENST00000513996 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
HERC4-214ENST00000513996 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
HERC4-214ENST00000513996 PRKRIP1Q9H875 184 aaPredicted RBP11.59□□□□□ -0.55
HERC4-214ENST00000513996 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
HERC4-214ENST00000513996 CICQ96RK0 1608 aaPredicted RBP11.59□□□□□ -0.55
HERC4-214ENST00000513996 A1BGP04217 495 aa11.58□□□□□ -0.56
HERC4-214ENST00000513996 TM4SF1P30408 202 aa11.58□□□□□ -0.56
HERC4-214ENST00000513996 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
HERC4-214ENST00000513996 DDR1Q08345 913 aa11.58□□□□□ -0.56
HERC4-214ENST00000513996 TAF7Q15545 349 aaPredicted RBP11.58□□□□□ -0.56
HERC4-214ENST00000513996 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
HERC4-214ENST00000513996 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
HERC4-214ENST00000513996 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
HERC4-214ENST00000513996 SIPA1L3O60292 1781 aaPredicted RBP11.58□□□□□ -0.56
HERC4-214ENST00000513996 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
HERC4-214ENST00000513996 STARD3NLO95772 234 aa11.57□□□□□ -0.56
HERC4-214ENST00000513996 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
HERC4-214ENST00000513996 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
HERC4-214ENST00000513996 ZPR1O75312 459 aa11.56□□□□□ -0.56
HERC4-214ENST00000513996 PIP4K2AP48426 406 aaPredicted RBP11.56□□□□□ -0.56
HERC4-214ENST00000513996 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
HERC4-214ENST00000513996 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
HERC4-214ENST00000513996 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
HERC4-214ENST00000513996 COL15A1P39059 1388 aa11.55□□□□□ -0.56
HERC4-214ENST00000513996 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
HERC4-214ENST00000513996 A0A0G2JLW4 131 aa11.55□□□□□ -0.56
HERC4-214ENST00000513996 POLRMTO00411 1230 aaKnown RBP11.55□□□□□ -0.56
HERC4-214ENST00000513996 NEFMP07197 916 aa11.55□□□□□ -0.56
HERC4-214ENST00000513996 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
HERC4-214ENST00000513996 NFIXQ14938 502 aa11.55□□□□□ -0.56
HERC4-214ENST00000513996 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
HERC4-214ENST00000513996 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
HERC4-214ENST00000513996 UTRNP46939 3433 aa11.54□□□□□ -0.56
HERC4-214ENST00000513996 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
HERC4-214ENST00000513996 DPEP1P16444 411 aa11.54□□□□□ -0.56
HERC4-214ENST00000513996 KCNA3P22001 575 aa11.54□□□□□ -0.56
HERC4-214ENST00000513996 RIPK4P57078 832 aa11.54□□□□□ -0.56
HERC4-214ENST00000513996 CCDC184Q52MB2 194 aa11.54□□□□□ -0.56
HERC4-214ENST00000513996 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
HERC4-214ENST00000513996 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
HERC4-214ENST00000513996 DLG5Q8TDM6 1919 aa11.53□□□□□ -0.56
HERC4-214ENST00000513996 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
HERC4-214ENST00000513996 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
HERC4-214ENST00000513996 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
HERC4-214ENST00000513996 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
HERC4-214ENST00000513996 EIF4A1P60842 406 aaKnown RBP11.53□□□□□ -0.56
HERC4-214ENST00000513996 TGFB2P61812 414 aa11.53□□□□□ -0.56
HERC4-214ENST00000513996 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
HERC4-214ENST00000513996 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
HERC4-214ENST00000513996 C10orf71Q711Q0 1435 aa11.52□□□□□ -0.56
HERC4-214ENST00000513996 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.56
HERC4-214ENST00000513996 PXDNLA1KZ92 1463 aa11.52□□□□□ -0.56
HERC4-214ENST00000513996 A0A087WZG4 1122 aa11.52□□□□□ -0.57
HERC4-214ENST00000513996 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.57
HERC4-214ENST00000513996 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
HERC4-214ENST00000513996 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.57
HERC4-214ENST00000513996 BICDL1Q6ZP65 573 aa11.52□□□□□ -0.57
HERC4-214ENST00000513996 ZNF330Q9Y3S2 320 aaPredicted RBP11.52□□□□□ -0.57
HERC4-214ENST00000513996 CAMTA2O94983 1202 aa11.51□□□□□ -0.57
HERC4-214ENST00000513996 SERPINB2P05120 415 aa11.51□□□□□ -0.57
HERC4-214ENST00000513996 ZNF784Q8NCA9 323 aaPredicted RBP11.51□□□□□ -0.57
HERC4-214ENST00000513996 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
HERC4-214ENST00000513996 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
HERC4-214ENST00000513996 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
HERC4-214ENST00000513996 CHRNA5P30532 468 aa11.5□□□□□ -0.57
HERC4-214ENST00000513996 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
HERC4-214ENST00000513996 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
HERC4-214ENST00000513996 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
HERC4-214ENST00000513996 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
HERC4-214ENST00000513996 BCS1LQ9Y276 419 aa11.49□□□□□ -0.57
HERC4-214ENST00000513996 N4BP2Q86UW6 1770 aaPredicted RBP11.49□□□□□ -0.57
HERC4-214ENST00000513996 CHD4Q14839 1912 aa11.48□□□□□ -0.57
HERC4-214ENST00000513996 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
HERC4-214ENST00000513996 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
HERC4-214ENST00000513996 CHL1O00533 1208 aa11.47□□□□□ -0.57
HERC4-214ENST00000513996 APAF1O14727 1248 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms