RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
NEDD4-210ENST00000513957 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
NEDD4-210ENST00000513957 TFCP2L1Q9NZI6 479 aa10.8□□□□□ -0.68
NEDD4-210ENST00000513957 ZNF790Q6PG37 636 aa10.79□□□□□ -0.68
NEDD4-210ENST00000513957 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
NEDD4-210ENST00000513957 AK7Q96M32 723 aa10.79□□□□□ -0.68
NEDD4-210ENST00000513957 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
NEDD4-210ENST00000513957 SPON1Q9HCB6 807 aa10.79□□□□□ -0.68
NEDD4-210ENST00000513957 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
NEDD4-210ENST00000513957 TEX13AQ9BXU3 409 aaPredicted RBP10.78□□□□□ -0.68
NEDD4-210ENST00000513957 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
NEDD4-210ENST00000513957 PNPLA7Q6ZV29 1317 aa10.78□□□□□ -0.68
NEDD4-210ENST00000513957 BTBD11A6QL63 1104 aa10.77□□□□□ -0.69
NEDD4-210ENST00000513957 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.69
NEDD4-210ENST00000513957 ITPK1Q13572 414 aa10.77□□□□□ -0.69
NEDD4-210ENST00000513957 LINC00116Q8NCU8 138 aa10.77□□□□□ -0.69
NEDD4-210ENST00000513957 ADAMTS8Q9UP79 889 aa10.77□□□□□ -0.69
NEDD4-210ENST00000513957 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.69
NEDD4-210ENST00000513957 PTCD1O75127 700 aaKnown RBP10.76□□□□□ -0.69
NEDD4-210ENST00000513957 KCNQ4P56696 695 aa10.76□□□□□ -0.69
NEDD4-210ENST00000513957 TAF7Q15545 349 aaPredicted RBP10.76□□□□□ -0.69
NEDD4-210ENST00000513957 MCM10Q7L590 875 aa10.76□□□□□ -0.69
NEDD4-210ENST00000513957 FMNL2Q96PY5 1086 aa10.76□□□□□ -0.69
NEDD4-210ENST00000513957 SLC4A9Q96Q91 983 aa10.76□□□□□ -0.69
NEDD4-210ENST00000513957 RTCBQ9Y3I0 505 aaKnown RBP10.76□□□□□ -0.69
NEDD4-210ENST00000513957 STARD3NLO95772 234 aa10.75□□□□□ -0.69
NEDD4-210ENST00000513957 RIPK4P57078 832 aa10.75□□□□□ -0.69
NEDD4-210ENST00000513957 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
NEDD4-210ENST00000513957 SCN7AQ01118 1682 aa10.75□□□□□ -0.69
NEDD4-210ENST00000513957 SRCAPQ6ZRS2 3230 aa10.74□□□□□ -0.69
NEDD4-210ENST00000513957 GNPATO15228 680 aa10.74□□□□□ -0.69
NEDD4-210ENST00000513957 RPS6KA4O75676 772 aa10.74□□□□□ -0.69
NEDD4-210ENST00000513957 CALD1Q05682 793 aaKnown RBP10.74□□□□□ -0.69
NEDD4-210ENST00000513957 SLC39A6Q13433 755 aa10.74□□□□□ -0.69
NEDD4-210ENST00000513957 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
NEDD4-210ENST00000513957 ZNF496Q96IT1 587 aaPredicted RBP10.74□□□□□ -0.69
NEDD4-210ENST00000513957 BCORQ6W2J9 1755 aa10.74□□□□□ -0.69
NEDD4-210ENST00000513957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.73□□□□□ -0.69
NEDD4-210ENST00000513957 CRKLP46109 303 aaKnown RBP10.73□□□□□ -0.69
NEDD4-210ENST00000513957 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
NEDD4-210ENST00000513957 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
NEDD4-210ENST00000513957 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
NEDD4-210ENST00000513957 KIF13BQ9NQT8 1826 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 ZBTB7AO95365 584 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
NEDD4-210ENST00000513957 CYP19A1P11511 503 aaPredicted RBP10.72□□□□□ -0.69
NEDD4-210ENST00000513957 POLD1P28340 1107 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 PTGER2P43116 358 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 DCTN1Q14203 1278 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 CCDC27Q2M243 656 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 DNAJC10Q8IXB1 793 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 CCDC146Q8IYE0 955 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
NEDD4-210ENST00000513957 SOS1Q07889 1333 aaPredicted RBP10.71□□□□□ -0.69
NEDD4-210ENST00000513957 PDGFDQ9GZP0 370 aaPredicted RBP10.71□□□□□ -0.69
NEDD4-210ENST00000513957 PPP1R1BQ9UD71 204 aaPredicted RBP10.71□□□□□ -0.69
NEDD4-210ENST00000513957 COL15A1P39059 1388 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 A0A087WZG4 1122 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 PHF14O94880 888 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 RFC4P35249 363 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 CCDC184Q52MB2 194 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 INTS5Q6P9B9 1019 aaKnown RBP10.7□□□□□ -0.7
NEDD4-210ENST00000513957 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
NEDD4-210ENST00000513957 ERBB4Q15303 1308 aa10.69□□□□□ -0.7
NEDD4-210ENST00000513957 USP42Q9H9J4 1324 aaKnown RBP10.69□□□□□ -0.7
NEDD4-210ENST00000513957 CACNA1FO60840 1977 aa10.69□□□□□ -0.7
NEDD4-210ENST00000513957 APAF1O14727 1248 aa10.69□□□□□ -0.7
NEDD4-210ENST00000513957 IL6STP40189 918 aaPredicted RBP10.69□□□□□ -0.7
NEDD4-210ENST00000513957 NLGN1Q8N2Q7 840 aa10.69□□□□□ -0.7
NEDD4-210ENST00000513957 TSPYL4Q9UJ04 414 aa10.69□□□□□ -0.7
NEDD4-210ENST00000513957 NRXN2Q9P2S2 1712 aa10.69□□□□□ -0.7
NEDD4-210ENST00000513957 HOXB7P09629 217 aa10.68□□□□□ -0.7
NEDD4-210ENST00000513957 EIF4A1P60842 406 aaKnown RBP10.68□□□□□ -0.7
NEDD4-210ENST00000513957 NEUROD2Q15784 382 aa10.68□□□□□ -0.7
NEDD4-210ENST00000513957 NPM2Q86SE8 214 aaKnown RBP10.68□□□□□ -0.7
NEDD4-210ENST00000513957 AMIGO3Q86WK7 504 aa10.68□□□□□ -0.7
NEDD4-210ENST00000513957 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
NEDD4-210ENST00000513957 ARHGEF1Q92888 912 aaKnown RBP10.68□□□□□ -0.7
NEDD4-210ENST00000513957 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
NEDD4-210ENST00000513957 IFT57Q9NWB7 429 aa10.68□□□□□ -0.7
NEDD4-210ENST00000513957 ZBTB1Q9Y2K1 713 aa10.68□□□□□ -0.7
NEDD4-210ENST00000513957 RRP7AQ9Y3A4 280 aaKnown RBP10.68□□□□□ -0.7
NEDD4-210ENST00000513957 IL16Q14005 1332 aa10.67□□□□□ -0.7
NEDD4-210ENST00000513957 CHL1O00533 1208 aa10.67□□□□□ -0.7
NEDD4-210ENST00000513957 KCNQ3O43525 872 aa10.67□□□□□ -0.7
NEDD4-210ENST00000513957 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
NEDD4-210ENST00000513957 EIF5P55010 431 aaKnown RBP10.67□□□□□ -0.7
NEDD4-210ENST00000513957 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
NEDD4-210ENST00000513957 CHMP4AQ9BY43 222 aa10.67□□□□□ -0.7
NEDD4-210ENST00000513957 AFDNP55196 1824 aaKnown RBP10.67□□□□□ -0.7
NEDD4-210ENST00000513957 ZPR1O75312 459 aa10.66□□□□□ -0.7
NEDD4-210ENST00000513957 GYS1P13807 737 aa10.66□□□□□ -0.7
NEDD4-210ENST00000513957 GNAI1P63096 354 aa10.66□□□□□ -0.7
NEDD4-210ENST00000513957 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
NEDD4-210ENST00000513957 NARFQ9UHQ1 456 aa10.66□□□□□ -0.7
NEDD4-210ENST00000513957 NUP98P52948 1817 aa10.65□□□□□ -0.7
NEDD4-210ENST00000513957 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.7
NEDD4-210ENST00000513957 ZNF853P0CG23 659 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms