RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 PGBD3Q8N328 593 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 AIDAQ96BJ3 306 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 ATXN7L1Q9ULK2 861 aaPredicted RBP6.83□□□□□ -1.32
PROM1-216ENST00000513946 A0A1W2PNR3 127 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 MAP2K3P46734 347 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 TEAD4Q15561 434 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 CCDC102BQ68D86 513 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 PROSER2Q86WR7 435 aaPredicted RBP6.82□□□□□ -1.32
PROM1-216ENST00000513946 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 ZDHHC3Q9NYG2 299 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 CABP1Q9NZU7 370 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 TFIP11Q9UBB9 837 aaKnown RBP6.82□□□□□ -1.32
PROM1-216ENST00000513946 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
PROM1-216ENST00000513946 PHF24Q9UPV7 400 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 PCDHGC4Q9Y5F7 938 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 PARP3Q9Y6F1 533 aa6.82□□□□□ -1.32
PROM1-216ENST00000513946 CNTNAP5Q8WYK1 1306 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 GDF11O95390 407 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 NOS2P35228 1153 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 TXLNAP40222 546 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 MARSP56192 900 aaKnown RBP6.81□□□□□ -1.32
PROM1-216ENST00000513946 MAP3K10Q02779 954 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 TNP2Q05952 138 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 POTEAQ6S8J7 498 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 TMEM151AQ8N4L1 468 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 OXCT2Q9BYC2 517 aaPredicted RBP6.81□□□□□ -1.32
PROM1-216ENST00000513946 ENAMQ9NRM1 1142 aa6.81□□□□□ -1.32
PROM1-216ENST00000513946 NSFL1CQ9UNZ2 370 aaKnown RBP6.81□□□□□ -1.32
PROM1-216ENST00000513946 M0R2N6 131 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 EML1O00423 815 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 FGFR3P22607 806 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 LARGE2Q8N3Y3 721 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 OGFOD1Q8N543 542 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 GLMNQ92990 594 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 L3MBTL2Q969R5 705 aa6.8□□□□□ -1.32
PROM1-216ENST00000513946 SCARF2Q96GP6 870 aaPredicted RBP6.8□□□□□ -1.32
PROM1-216ENST00000513946 SHISA8B8ZZ34 492 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 ATXN7O15265 892 aaPredicted RBP6.79□□□□□ -1.32
PROM1-216ENST00000513946 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
PROM1-216ENST00000513946 IRS1P35568 1242 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 ATP1A2P50993 1020 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 PSME1Q06323 249 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 TBCELQ5QJ74 424 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 SH3PXD2AQ5TCZ1 1133 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 FIGNL1Q6PIW4 674 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 SIX5Q8N196 739 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 GALNT6Q8NCL4 622 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 TPCN2Q8NHX9 752 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 KLF15Q9UIH9 416 aa6.79□□□□□ -1.32
PROM1-216ENST00000513946 PALM3A6NDB9 673 aaPredicted RBP6.78□□□□□ -1.32
PROM1-216ENST00000513946 RNF225M0QZC1 329 aaPredicted RBP6.78□□□□□ -1.32
PROM1-216ENST00000513946 MAPTP10636 758 aaKnown RBP6.78□□□□□ -1.32
PROM1-216ENST00000513946 ARSJQ5FYB0 599 aaPredicted RBP6.78□□□□□ -1.32
PROM1-216ENST00000513946 FAM182BQ5T319 152 aa6.78□□□□□ -1.32
PROM1-216ENST00000513946 KANK4Q5T7N3 995 aaPredicted RBP6.78□□□□□ -1.32
PROM1-216ENST00000513946 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
PROM1-216ENST00000513946 MAFBQ9Y5Q3 323 aaPredicted RBP6.78□□□□□ -1.32
PROM1-216ENST00000513946 C21orf2O43822 256 aa6.77□□□□□ -1.33
PROM1-216ENST00000513946 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
PROM1-216ENST00000513946 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.33
PROM1-216ENST00000513946 SAMD5Q5TGI4 173 aa6.77□□□□□ -1.33
PROM1-216ENST00000513946 KANK3Q6NY19 840 aa6.77□□□□□ -1.33
PROM1-216ENST00000513946 PPP1R12CQ9BZL4 782 aa6.77□□□□□ -1.33
PROM1-216ENST00000513946 TSPAN10Q9H1Z9 355 aaPredicted RBP6.77□□□□□ -1.33
PROM1-216ENST00000513946 STRN4Q9NRL3 753 aa6.77□□□□□ -1.33
PROM1-216ENST00000513946 GDF2Q9UK05 429 aaPredicted RBP6.77□□□□□ -1.33
PROM1-216ENST00000513946 SFI1A8K8P3 1242 aa6.76□□□□□ -1.33
PROM1-216ENST00000513946 EFSO43281 561 aa6.76□□□□□ -1.33
PROM1-216ENST00000513946 BMP4P12644 408 aa6.76□□□□□ -1.33
PROM1-216ENST00000513946 TATP17735 454 aaPredicted RBP6.76□□□□□ -1.33
PROM1-216ENST00000513946 BEND7Q8N7W2 519 aaPredicted RBP6.76□□□□□ -1.33
PROM1-216ENST00000513946 NEDD1Q8NHV4 660 aa6.76□□□□□ -1.33
PROM1-216ENST00000513946 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
PROM1-216ENST00000513946 ITGB2P05107 769 aa6.75□□□□□ -1.33
PROM1-216ENST00000513946 FAM157BP0CG42 384 aa6.75□□□□□ -1.33
PROM1-216ENST00000513946 ARAFP10398 606 aa6.75□□□□□ -1.33
PROM1-216ENST00000513946 LINC00114Q6XXX2 140 aa6.75□□□□□ -1.33
PROM1-216ENST00000513946 GOLGA6L1Q8N7Z2 621 aa6.75□□□□□ -1.33
PROM1-216ENST00000513946 GGA1Q9UJY5 639 aa6.75□□□□□ -1.33
PROM1-216ENST00000513946 ATAD2Q6PL18 1390 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 SERTM1A2A2V5 107 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 DCDC2BA2VCK2 349 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 HIRAP54198 1017 aaPredicted RBP6.74□□□□□ -1.33
PROM1-216ENST00000513946 PTK7Q13308 1070 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 C1orf53Q5VUE5 145 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 TSEN2Q8NCE0 465 aaKnown RBP6.74□□□□□ -1.33
PROM1-216ENST00000513946 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 CALR3Q96L12 384 aaKnown RBP6.74□□□□□ -1.33
PROM1-216ENST00000513946 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 HCN4Q9Y3Q4 1203 aa6.74□□□□□ -1.33
PROM1-216ENST00000513946 KHNYNO15037 678 aaKnown RBP6.73□□□□□ -1.33
PROM1-216ENST00000513946 EPXP11678 715 aa6.73□□□□□ -1.33
PROM1-216ENST00000513946 CD33P20138 364 aa6.73□□□□□ -1.33
PROM1-216ENST00000513946 RASA1P20936 1047 aa6.73□□□□□ -1.33
PROM1-216ENST00000513946 PSMA6P60900 246 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms