RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
SGCA-209ENST00000513821 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
SGCA-209ENST00000513821 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
SGCA-209ENST00000513821 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
SGCA-209ENST00000513821 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
SGCA-209ENST00000513821 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
SGCA-209ENST00000513821 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
SGCA-209ENST00000513821 TMPOP42166 694 aaKnown RBP18.21■□□□□ 0.51
SGCA-209ENST00000513821 EIF5P55010 431 aaKnown RBP18.21■□□□□ 0.51
SGCA-209ENST00000513821 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
SGCA-209ENST00000513821 ZBTB1Q9Y2K1 713 aa18.21■□□□□ 0.51
SGCA-209ENST00000513821 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
SGCA-209ENST00000513821 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
SGCA-209ENST00000513821 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
SGCA-209ENST00000513821 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
SGCA-209ENST00000513821 TJP1Q07157 1748 aa18.19■□□□□ 0.5
SGCA-209ENST00000513821 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
SGCA-209ENST00000513821 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
SGCA-209ENST00000513821 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
SGCA-209ENST00000513821 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
SGCA-209ENST00000513821 SIPA1L3O60292 1781 aaPredicted RBP18.18■□□□□ 0.5
SGCA-209ENST00000513821 ANP32CO43423 234 aa18.18■□□□□ 0.5
SGCA-209ENST00000513821 A1BGP04217 495 aa18.18■□□□□ 0.5
SGCA-209ENST00000513821 TM4SF1P30408 202 aa18.18■□□□□ 0.5
SGCA-209ENST00000513821 TGFB2P61812 414 aa18.18■□□□□ 0.5
SGCA-209ENST00000513821 FKBP8Q14318 412 aa18.18■□□□□ 0.5
SGCA-209ENST00000513821 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
SGCA-209ENST00000513821 COL15A1P39059 1388 aa18.17■□□□□ 0.5
SGCA-209ENST00000513821 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
SGCA-209ENST00000513821 YY1P25490 414 aa18.17■□□□□ 0.5
SGCA-209ENST00000513821 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SGCA-209ENST00000513821 NEUROD2Q15784 382 aa18.16■□□□□ 0.5
SGCA-209ENST00000513821 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
SGCA-209ENST00000513821 EIF4A1P60842 406 aaKnown RBP18.14■□□□□ 0.49
SGCA-209ENST00000513821 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
SGCA-209ENST00000513821 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
SGCA-209ENST00000513821 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
SGCA-209ENST00000513821 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
SGCA-209ENST00000513821 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
SGCA-209ENST00000513821 DLG5Q8TDM6 1919 aa18.13■□□□□ 0.49
SGCA-209ENST00000513821 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
SGCA-209ENST00000513821 POLRMTO00411 1230 aaKnown RBP18.11■□□□□ 0.49
SGCA-209ENST00000513821 DDR1Q08345 913 aa18.11■□□□□ 0.49
SGCA-209ENST00000513821 NFIXQ14938 502 aa18.11■□□□□ 0.49
SGCA-209ENST00000513821 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
SGCA-209ENST00000513821 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
SGCA-209ENST00000513821 SERPINB2P05120 415 aa18.1■□□□□ 0.49
SGCA-209ENST00000513821 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
SGCA-209ENST00000513821 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
SGCA-209ENST00000513821 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
SGCA-209ENST00000513821 RGL2O15211 777 aa18.09■□□□□ 0.49
SGCA-209ENST00000513821 YBX3P16989 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
SGCA-209ENST00000513821 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 CHL1O00533 1208 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 APAF1O14727 1248 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
SGCA-209ENST00000513821 NBPF10Q6P3W6 841 aaKnown RBP18.08■□□□□ 0.48
SGCA-209ENST00000513821 NBPF15Q8N660 670 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 C4AP0C0L4 1744 aa18.08■□□□□ 0.48
SGCA-209ENST00000513821 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
SGCA-209ENST00000513821 DPEP1P16444 411 aa18.07■□□□□ 0.48
SGCA-209ENST00000513821 BICDL1Q6ZP65 573 aa18.07■□□□□ 0.48
SGCA-209ENST00000513821 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
SGCA-209ENST00000513821 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
SGCA-209ENST00000513821 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
SGCA-209ENST00000513821 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
SGCA-209ENST00000513821 TBC1D9BQ66K14 1250 aa18.06■□□□□ 0.48
SGCA-209ENST00000513821 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
SGCA-209ENST00000513821 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
SGCA-209ENST00000513821 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
SGCA-209ENST00000513821 CFAP44Q96MT7 982 aa18.05■□□□□ 0.48
SGCA-209ENST00000513821 PDZRN3Q9UPQ7 1066 aa18.05■□□□□ 0.48
SGCA-209ENST00000513821 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
SGCA-209ENST00000513821 ERVV-1B6SEH8 477 aa18.03■□□□□ 0.48
SGCA-209ENST00000513821 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
SGCA-209ENST00000513821 KCNA3P22001 575 aa18.03■□□□□ 0.48
SGCA-209ENST00000513821 CHD4Q14839 1912 aa18.03■□□□□ 0.48
SGCA-209ENST00000513821 NPHP1O15259 732 aa18.02■□□□□ 0.48
SGCA-209ENST00000513821 GNAI1P63096 354 aa18.02■□□□□ 0.48
SGCA-209ENST00000513821 DALRD3Q5D0E6 543 aaKnown RBP18.02■□□□□ 0.48
SGCA-209ENST00000513821 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
SGCA-209ENST00000513821 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
SGCA-209ENST00000513821 KIF13BQ9NQT8 1826 aa18.02■□□□□ 0.47
SGCA-209ENST00000513821 CARMIL3Q8ND23 1372 aa18.02■□□□□ 0.47
SGCA-209ENST00000513821 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.47
SGCA-209ENST00000513821 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 H0YIN7 160 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 MYL6BP14649 208 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 PDE6BP35913 854 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
SGCA-209ENST00000513821 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
SGCA-209ENST00000513821 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
SGCA-209ENST00000513821 IFT57Q9NWB7 429 aa18■□□□□ 0.47
SGCA-209ENST00000513821 HOXB7P09629 217 aa17.99■□□□□ 0.47
SGCA-209ENST00000513821 ZNF853P0CG23 659 aa17.99■□□□□ 0.47
SGCA-209ENST00000513821 CHRNA5P30532 468 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms