RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.86
HMGN1P17-201ENST00000513734 NKTRP30414 1462 aaKnown RBP9.65□□□□□ -0.87
HMGN1P17-201ENST00000513734 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.87
HMGN1P17-201ENST00000513734 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.65□□□□□ -0.87
HMGN1P17-201ENST00000513734 KCNC4Q03721 635 aa9.64□□□□□ -0.87
HMGN1P17-201ENST00000513734 NBPF14Q5TI25 921 aa9.64□□□□□ -0.87
HMGN1P17-201ENST00000513734 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
HMGN1P17-201ENST00000513734 TRPM2O94759 1503 aa9.64□□□□□ -0.87
HMGN1P17-201ENST00000513734 PPLO60437 1756 aa9.64□□□□□ -0.87
HMGN1P17-201ENST00000513734 DIP2AQ14689 1571 aa9.63□□□□□ -0.87
HMGN1P17-201ENST00000513734 NEXMIFQ5QGS0 1516 aa9.63□□□□□ -0.87
HMGN1P17-201ENST00000513734 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
HMGN1P17-201ENST00000513734 PTK2Q05397 1052 aa9.63□□□□□ -0.87
HMGN1P17-201ENST00000513734 PDXDC2PQ6P474 469 aa9.63□□□□□ -0.87
HMGN1P17-201ENST00000513734 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
HMGN1P17-201ENST00000513734 KCNA6P17658 529 aa9.62□□□□□ -0.87
HMGN1P17-201ENST00000513734 HFM1A2PYH4 1435 aa9.62□□□□□ -0.87
HMGN1P17-201ENST00000513734 PTPRUQ92729 1446 aa9.62□□□□□ -0.87
HMGN1P17-201ENST00000513734 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
HMGN1P17-201ENST00000513734 GPSM3Q9Y4H4 160 aa9.61□□□□□ -0.87
HMGN1P17-201ENST00000513734 SETBP1Q9Y6X0 1596 aa9.61□□□□□ -0.87
HMGN1P17-201ENST00000513734 IFT172Q9UG01 1749 aa9.61□□□□□ -0.87
HMGN1P17-201ENST00000513734 PPEF1O14829 653 aaPredicted RBP9.6□□□□□ -0.87
HMGN1P17-201ENST00000513734 PPP1R15AO75807 674 aaPredicted RBP9.6□□□□□ -0.87
HMGN1P17-201ENST00000513734 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
HMGN1P17-201ENST00000513734 ARHGAP9Q9BRR9 750 aa9.6□□□□□ -0.87
HMGN1P17-201ENST00000513734 PPP1R12CQ9BZL4 782 aa9.6□□□□□ -0.87
HMGN1P17-201ENST00000513734 RFX1P22670 979 aa9.59□□□□□ -0.87
HMGN1P17-201ENST00000513734 BAP1Q92560 729 aa9.59□□□□□ -0.87
HMGN1P17-201ENST00000513734 UCN2Q96RP3 112 aa9.59□□□□□ -0.87
HMGN1P17-201ENST00000513734 OCSTAMPQ9BR26 566 aa9.59□□□□□ -0.87
HMGN1P17-201ENST00000513734 COL16A1Q07092 1604 aaPredicted RBP9.59□□□□□ -0.87
HMGN1P17-201ENST00000513734 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
HMGN1P17-201ENST00000513734 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
HMGN1P17-201ENST00000513734 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
HMGN1P17-201ENST00000513734 PCDHB9Q9Y5E1 797 aa9.58□□□□□ -0.88
HMGN1P17-201ENST00000513734 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
HMGN1P17-201ENST00000513734 SH3BP5LQ7L8J4 393 aa9.57□□□□□ -0.88
HMGN1P17-201ENST00000513734 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
HMGN1P17-201ENST00000513734 ADAM32Q8TC27 787 aa9.57□□□□□ -0.88
HMGN1P17-201ENST00000513734 CARD14Q9BXL6 1004 aa9.57□□□□□ -0.88
HMGN1P17-201ENST00000513734 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 METP08581 1390 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 LMOD1P29536 600 aaPredicted RBP9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 GGCXP38435 758 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 AGERQ15109 404 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 TBX22Q9Y458 520 aa9.56□□□□□ -0.88
HMGN1P17-201ENST00000513734 MSH6P52701 1360 aa9.55□□□□□ -0.88
HMGN1P17-201ENST00000513734 ZNF326Q5BKZ1 582 aaKnown RBP9.55□□□□□ -0.88
HMGN1P17-201ENST00000513734 TBC1D9Q6ZT07 1266 aa9.55□□□□□ -0.88
HMGN1P17-201ENST00000513734 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
HMGN1P17-201ENST00000513734 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.55□□□□□ -0.88
HMGN1P17-201ENST00000513734 FOXJ1Q92949 421 aa9.55□□□□□ -0.88
HMGN1P17-201ENST00000513734 PIK3CDO00329 1044 aa9.54□□□□□ -0.88
HMGN1P17-201ENST00000513734 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
HMGN1P17-201ENST00000513734 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
HMGN1P17-201ENST00000513734 ZNF592Q92610 1267 aa9.54□□□□□ -0.88
HMGN1P17-201ENST00000513734 NHSL1Q5SYE7 1610 aa9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 AHDC1Q5TGY3 1603 aaPredicted RBP9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 SHPRHQ149N8 1683 aa9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 ANKLE1Q8NAG6 615 aa9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 PBXIP1Q96AQ6 731 aa9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 CEP126Q9P2H0 1117 aa9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 AMOTL2Q9Y2J4 779 aa9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
HMGN1P17-201ENST00000513734 PIK3R4Q99570 1358 aa9.52□□□□□ -0.88
HMGN1P17-201ENST00000513734 ATP9BO43861 1147 aa9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 SH3BP2P78314 561 aa9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 SH3RF1Q7Z6J0 888 aa9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 DZIP3Q86Y13 1208 aaKnown RBP9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 RGS17Q9UGC6 210 aaPredicted RBP9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
HMGN1P17-201ENST00000513734 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 RGPD8O14715 1765 aaPredicted RBP9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 SKIP12755 728 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 SLAIN2Q9P270 581 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 LRP6O75581 1613 aa9.51□□□□□ -0.89
HMGN1P17-201ENST00000513734 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
HMGN1P17-201ENST00000513734 TRIM32Q13049 653 aa9.5□□□□□ -0.89
HMGN1P17-201ENST00000513734 MMRN1Q13201 1228 aa9.5□□□□□ -0.89
HMGN1P17-201ENST00000513734 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
HMGN1P17-201ENST00000513734 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
HMGN1P17-201ENST00000513734 KNDC1Q76NI1 1749 aa9.5□□□□□ -0.89
HMGN1P17-201ENST00000513734 MST1RQ04912 1400 aa9.49□□□□□ -0.89
HMGN1P17-201ENST00000513734 SPATA31E1Q6ZUB1 1445 aa9.49□□□□□ -0.89
HMGN1P17-201ENST00000513734 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
HMGN1P17-201ENST00000513734 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
HMGN1P17-201ENST00000513734 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
HMGN1P17-201ENST00000513734 FAM174AQ8TBP5 190 aa9.49□□□□□ -0.89
HMGN1P17-201ENST00000513734 ROBO2Q9HCK4 1378 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms