RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
HTT-212ENST00000513639 ZNF496Q96IT1 587 aaPredicted RBP9.7□□□□□ -0.86
HTT-212ENST00000513639 PIM2Q9P1W9 311 aa9.7□□□□□ -0.86
HTT-212ENST00000513639 SRP68Q9UHB9 627 aaKnown RBP9.7□□□□□ -0.86
HTT-212ENST00000513639 SOS1Q07889 1333 aaPredicted RBP9.7□□□□□ -0.86
HTT-212ENST00000513639 ZNF831Q5JPB2 1677 aa9.7□□□□□ -0.86
HTT-212ENST00000513639 DPEP1P16444 411 aa9.69□□□□□ -0.86
HTT-212ENST00000513639 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
HTT-212ENST00000513639 RALBP1Q15311 655 aa9.69□□□□□ -0.86
HTT-212ENST00000513639 TAF7Q15545 349 aaPredicted RBP9.69□□□□□ -0.86
HTT-212ENST00000513639 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
HTT-212ENST00000513639 TUBGCP6Q96RT7 1819 aa9.69□□□□□ -0.86
HTT-212ENST00000513639 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
HTT-212ENST00000513639 CEMIPQ8WUJ3 1361 aa9.68□□□□□ -0.86
HTT-212ENST00000513639 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
HTT-212ENST00000513639 SNRPA1P09661 255 aaKnown RBP9.68□□□□□ -0.86
HTT-212ENST00000513639 IL6STP40189 918 aaPredicted RBP9.68□□□□□ -0.86
HTT-212ENST00000513639 C1QTNF8P60827 252 aa9.68□□□□□ -0.86
HTT-212ENST00000513639 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
HTT-212ENST00000513639 ARHGAP27Q6ZUM4 889 aa9.68□□□□□ -0.86
HTT-212ENST00000513639 GPBP1L1Q9HC44 474 aaPredicted RBP9.68□□□□□ -0.86
HTT-212ENST00000513639 ZBTB1Q9Y2K1 713 aa9.68□□□□□ -0.86
HTT-212ENST00000513639 CHD4Q14839 1912 aa9.68□□□□□ -0.86
HTT-212ENST00000513639 HEG1Q9ULI3 1381 aa9.67□□□□□ -0.86
HTT-212ENST00000513639 POLRMTO00411 1230 aaKnown RBP9.67□□□□□ -0.86
HTT-212ENST00000513639 MCM10Q7L590 875 aa9.67□□□□□ -0.86
HTT-212ENST00000513639 PNISRQ8TF01 805 aaKnown RBP9.67□□□□□ -0.86
HTT-212ENST00000513639 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
HTT-212ENST00000513639 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
HTT-212ENST00000513639 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
HTT-212ENST00000513639 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
HTT-212ENST00000513639 SERPINB2P05120 415 aa9.66□□□□□ -0.86
HTT-212ENST00000513639 KCNA3P22001 575 aa9.66□□□□□ -0.86
HTT-212ENST00000513639 DDR1Q08345 913 aa9.66□□□□□ -0.86
HTT-212ENST00000513639 NFIXQ14938 502 aa9.66□□□□□ -0.86
HTT-212ENST00000513639 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
HTT-212ENST00000513639 COL15A1P39059 1388 aa9.65□□□□□ -0.86
HTT-212ENST00000513639 H0YIN7 160 aa9.65□□□□□ -0.86
HTT-212ENST00000513639 A1BGP04217 495 aa9.65□□□□□ -0.86
HTT-212ENST00000513639 CLEC4GQ6UXB4 293 aa9.65□□□□□ -0.86
HTT-212ENST00000513639 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
HTT-212ENST00000513639 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
HTT-212ENST00000513639 SCN11AQ9UI33 1791 aa9.65□□□□□ -0.87
HTT-212ENST00000513639 MRC1P22897 1456 aa9.65□□□□□ -0.87
HTT-212ENST00000513639 MYH14Q7Z406 1995 aaKnown RBP9.64□□□□□ -0.87
HTT-212ENST00000513639 MAPK8IP3Q9UPT6 1336 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 KCNQ3O43525 872 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 PDE6BP35913 854 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
HTT-212ENST00000513639 BRIP1Q9BX63 1249 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 C10orf71Q711Q0 1435 aa9.64□□□□□ -0.87
HTT-212ENST00000513639 RGL2O15211 777 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 NPHP1O15259 732 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 CHRNA5P30532 468 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 PLEKHF1Q96S99 279 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 ZNF652Q9Y2D9 606 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 PXDNLA1KZ92 1463 aa9.63□□□□□ -0.87
HTT-212ENST00000513639 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
HTT-212ENST00000513639 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
HTT-212ENST00000513639 C2CD5Q86YS7 1000 aa9.62□□□□□ -0.87
HTT-212ENST00000513639 CICQ96RK0 1608 aaPredicted RBP9.62□□□□□ -0.87
HTT-212ENST00000513639 ATP10DQ9P241 1426 aa9.62□□□□□ -0.87
HTT-212ENST00000513639 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
HTT-212ENST00000513639 SENP3-EIF4A1A0A087X0R7 540 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 CAMTA2O94983 1202 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 RIPK4P57078 832 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 TBC1D9BQ66K14 1250 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 TPTE2Q6XPS3 522 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 ZNF526Q8TF50 670 aaPredicted RBP9.61□□□□□ -0.87
HTT-212ENST00000513639 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
HTT-212ENST00000513639 CEP350Q5VT06 3117 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 C4AP0C0L4 1744 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 ST5P78524 1137 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 CNBD1Q8NA66 436 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 ZNF622Q969S3 477 aaKnown RBP eCLIP9.6□□□□□ -0.87
HTT-212ENST00000513639 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 CARMIL3Q8ND23 1372 aa9.6□□□□□ -0.87
HTT-212ENST00000513639 EIF4A1P60842 406 aaKnown RBP9.59□□□□□ -0.87
HTT-212ENST00000513639 WDR43Q15061 677 aaKnown RBP eCLIP9.59□□□□□ -0.87
HTT-212ENST00000513639 PRR5LQ6MZQ0 368 aa9.59□□□□□ -0.87
HTT-212ENST00000513639 NBPF5PQ86XG9 351 aaPredicted RBP9.59□□□□□ -0.87
HTT-212ENST00000513639 ADCY9O60503 1353 aa9.59□□□□□ -0.87
HTT-212ENST00000513639 KDM2BQ8NHM5 1336 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 MYBBP1AQ9BQG0 1328 aaKnown RBP9.58□□□□□ -0.88
HTT-212ENST00000513639 PRAMEF22A3QJZ6 481 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 ERVV-1B6SEH8 477 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 TOMM70O94826 608 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 LMNB1P20700 586 aa9.58□□□□□ -0.88
HTT-212ENST00000513639 GTF2E1P29083 439 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms