RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 TSEN2Q8NCE0 465 aaKnown RBP11.98□□□□□ -0.49
TRAPPC11-210ENST00000513600 GPAMQ9HCL2 828 aa11.98□□□□□ -0.49
TRAPPC11-210ENST00000513600 LBRQ14739 615 aaKnown RBP11.97□□□□□ -0.49
TRAPPC11-210ENST00000513600 TEAD4Q15561 434 aa11.97□□□□□ -0.49
TRAPPC11-210ENST00000513600 NBPF1Q3BBV0 1214 aa11.97□□□□□ -0.49
TRAPPC11-210ENST00000513600 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
TRAPPC11-210ENST00000513600 AIDAQ96BJ3 306 aa11.97□□□□□ -0.49
TRAPPC11-210ENST00000513600 ZNF837Q96EG3 531 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC11-210ENST00000513600 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
TRAPPC11-210ENST00000513600 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
TRAPPC11-210ENST00000513600 FAM200AQ8TCP9 573 aa11.95□□□□□ -0.5
TRAPPC11-210ENST00000513600 ARXQ96QS3 562 aa11.95□□□□□ -0.5
TRAPPC11-210ENST00000513600 TSPAN10Q9H1Z9 355 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC11-210ENST00000513600 ZDHHC3Q9NYG2 299 aa11.95□□□□□ -0.5
TRAPPC11-210ENST00000513600 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
TRAPPC11-210ENST00000513600 TATP17735 454 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC11-210ENST00000513600 NOS2P35228 1153 aa11.94□□□□□ -0.5
TRAPPC11-210ENST00000513600 TBCELQ5QJ74 424 aa11.94□□□□□ -0.5
TRAPPC11-210ENST00000513600 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
TRAPPC11-210ENST00000513600 HINFPQ9BQA5 517 aa11.94□□□□□ -0.5
TRAPPC11-210ENST00000513600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 SERTM1A2A2V5 107 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 PSMA6P60900 246 aaKnown RBP11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 ELOAQ14241 798 aaKnown RBP11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 ZDHHC1Q8WTX9 485 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 L3MBTL2Q969R5 705 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 COL25A1Q9BXS0 654 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 CRISPLD1Q9H336 500 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 RUBCNLQ9H714 662 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 C1orf115Q9H7X2 142 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 NOVA2Q9UNW9 492 aaKnown RBP11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 PARP3Q9Y6F1 533 aa11.93□□□□□ -0.5
TRAPPC11-210ENST00000513600 EFHC2Q5JST6 749 aa11.92□□□□□ -0.5
TRAPPC11-210ENST00000513600 GTPBP3Q969Y2 492 aaKnown RBP11.92□□□□□ -0.5
TRAPPC11-210ENST00000513600 TRERF1Q96PN7 1200 aa11.92□□□□□ -0.5
TRAPPC11-210ENST00000513600 ZNF232Q9UNY5 417 aa11.92□□□□□ -0.5
TRAPPC11-210ENST00000513600 ATP4AP20648 1035 aa11.91□□□□□ -0.5
TRAPPC11-210ENST00000513600 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
TRAPPC11-210ENST00000513600 ATG7O95352 703 aa11.9□□□□□ -0.5
TRAPPC11-210ENST00000513600 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
TRAPPC11-210ENST00000513600 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC11-210ENST00000513600 HIRAP54198 1017 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC11-210ENST00000513600 STAG2Q8N3U4 1231 aa11.89□□□□□ -0.51
TRAPPC11-210ENST00000513600 SCG3Q8WXD2 468 aaKnown RBP11.89□□□□□ -0.51
TRAPPC11-210ENST00000513600 CNTNAP3BQ96NU0 1288 aa11.89□□□□□ -0.51
TRAPPC11-210ENST00000513600 CNTNAP3Q9BZ76 1288 aa11.89□□□□□ -0.51
TRAPPC11-210ENST00000513600 EML1O00423 815 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 C21orf2O43822 256 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 THBS1P07996 1170 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 TXLNAP40222 546 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 KRT76Q01546 638 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 ARSJQ5FYB0 599 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 POTEAQ6S8J7 498 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 NLRP8Q86W28 1048 aa11.88□□□□□ -0.51
TRAPPC11-210ENST00000513600 GPR25O00155 361 aa11.87□□□□□ -0.51
TRAPPC11-210ENST00000513600 RNFT1Q5M7Z0 435 aa11.87□□□□□ -0.51
TRAPPC11-210ENST00000513600 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
TRAPPC11-210ENST00000513600 GPC6Q9Y625 555 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC11-210ENST00000513600 A0A1W2PNR3 127 aa11.86□□□□□ -0.51
TRAPPC11-210ENST00000513600 IGFBP4P22692 258 aa11.86□□□□□ -0.51
TRAPPC11-210ENST00000513600 FIGNL1Q6PIW4 674 aa11.86□□□□□ -0.51
TRAPPC11-210ENST00000513600 BICDL1Q6ZP65 573 aa11.86□□□□□ -0.51
TRAPPC11-210ENST00000513600 ZIC5Q96T25 663 aa11.86□□□□□ -0.51
TRAPPC11-210ENST00000513600 PHF24Q9UPV7 400 aa11.86□□□□□ -0.51
TRAPPC11-210ENST00000513600 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 GAS6Q14393 721 aa11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 SH3PXD2AQ5TCZ1 1133 aa11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 C1orf53Q5VUE5 145 aa11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 C2orf49Q9BVC5 232 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 ZMIZ1Q9ULJ6 1067 aa11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 ACIN1Q9UKV3 1341 aaKnown RBP11.85□□□□□ -0.51
TRAPPC11-210ENST00000513600 SWI5Q1ZZU3 235 aa11.84□□□□□ -0.51
TRAPPC11-210ENST00000513600 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC11-210ENST00000513600 GJA3Q9Y6H8 435 aa11.84□□□□□ -0.51
TRAPPC11-210ENST00000513600 LGR5O75473 907 aa11.83□□□□□ -0.52
TRAPPC11-210ENST00000513600 PPP1R15AO75807 674 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC11-210ENST00000513600 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
TRAPPC11-210ENST00000513600 HCN4Q9Y3Q4 1203 aa11.83□□□□□ -0.52
TRAPPC11-210ENST00000513600 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 WEE1P30291 646 aa11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 ZSCAN1Q8NBB4 408 aa11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 STK32AQ8WU08 396 aa11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 ZCCHC2Q9C0B9 1178 aaKnown RBP11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 ATXN7L1Q9ULK2 861 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 PCDHGC4Q9Y5F7 938 aa11.82□□□□□ -0.52
TRAPPC11-210ENST00000513600 SRSF11Q05519 484 aaKnown RBP11.81□□□□□ -0.52
TRAPPC11-210ENST00000513600 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
TRAPPC11-210ENST00000513600 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
TRAPPC11-210ENST00000513600 PHACTR1Q9C0D0 580 aa11.81□□□□□ -0.52
TRAPPC11-210ENST00000513600 NEUROD4Q9HD90 331 aa11.81□□□□□ -0.52
TRAPPC11-210ENST00000513600 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
TRAPPC11-210ENST00000513600 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC11-210ENST00000513600 FOXO3O43524 673 aa11.8□□□□□ -0.52
TRAPPC11-210ENST00000513600 SLURP2P0DP57 97 aa11.8□□□□□ -0.52
TRAPPC11-210ENST00000513600 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
TRAPPC11-210ENST00000513600 MX2P20592 715 aa11.79□□□□□ -0.52
TRAPPC11-210ENST00000513600 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms