RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ZNF579Q8NAF0 562 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-204ENST00000513318 SMARCC1Q92922 1105 aaPredicted RBP9.91□□□□□ -0.82
HMGXB3-204ENST00000513318 C4BP0C0L5 1744 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 PALLDQ8WX93 1383 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 ZNF521Q96K83 1311 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 SENP3-EIF4A1A0A087X0R7 540 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 PLSCR1O15162 318 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 BAG6P46379 1132 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 HNRNPUQ00839 825 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 PTF1AQ7RTS3 328 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 BABAM1Q9NWV8 329 aa9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-204ENST00000513318 IL16Q14005 1332 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 BTBD11A6QL63 1104 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 APBA3O96018 575 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 PYGBP11216 843 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 GNAI1P63096 354 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 ZNF790Q6PG37 636 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 TTC5Q8N0Z6 440 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
HMGXB3-204ENST00000513318 ZBED9Q6R2W3 1325 aa9.88□□□□□ -0.83
HMGXB3-204ENST00000513318 C4AP0C0L4 1744 aa9.88□□□□□ -0.83
HMGXB3-204ENST00000513318 CHRM1P11229 460 aaPredicted RBP9.88□□□□□ -0.83
HMGXB3-204ENST00000513318 ATG3Q9NT62 314 aa9.88□□□□□ -0.83
HMGXB3-204ENST00000513318 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
HMGXB3-204ENST00000513318 ASAP1Q9ULH1 1129 aa9.88□□□□□ -0.83
HMGXB3-204ENST00000513318 CHL1O00533 1208 aa9.87□□□□□ -0.83
HMGXB3-204ENST00000513318 ZNF853P0CG23 659 aa9.87□□□□□ -0.83
HMGXB3-204ENST00000513318 SLC39A6Q13433 755 aa9.87□□□□□ -0.83
HMGXB3-204ENST00000513318 KIF12Q96FN5 646 aa9.87□□□□□ -0.83
HMGXB3-204ENST00000513318 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
HMGXB3-204ENST00000513318 HEG1Q9ULI3 1381 aa9.87□□□□□ -0.83
HMGXB3-204ENST00000513318 LOC102724428A0A0B4J2F2 783 aa9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 SIK1P57059 783 aa9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 FMNL2Q96PY5 1086 aa9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
HMGXB3-204ENST00000513318 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 DEFB132Q7Z7B7 95 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 ZNF496Q96IT1 587 aaPredicted RBP9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 CAMKK2Q96RR4 588 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 MIS18AQ9NYP9 233 aa9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 CCNL1Q9UK58 526 aaPredicted RBP9.85□□□□□ -0.83
HMGXB3-204ENST00000513318 FANCIQ9NVI1 1328 aa9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 NUP98P52948 1817 aa9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 E9PSI1 815 aa9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 MAP3K13O43283 966 aa9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 KCNQ3O43525 872 aa9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 ATP6V1AP38606 617 aa9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 EIF4A1P60842 406 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 EZH2Q15910 746 aaKnown RBP9.84□□□□□ -0.83
HMGXB3-204ENST00000513318 ANKRD36CQ5JPF3 1778 aa9.83□□□□□ -0.84
HMGXB3-204ENST00000513318 TSR2Q969E8 191 aaKnown RBP9.83□□□□□ -0.84
HMGXB3-204ENST00000513318 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
HMGXB3-204ENST00000513318 SCN7AQ01118 1682 aa9.83□□□□□ -0.84
HMGXB3-204ENST00000513318 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 SOCS7O14512 581 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 GIGYF1O75420 1035 aaPredicted RBP9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 HOXB7P09629 217 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 SNRPA1P09661 255 aaKnown RBP9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 SLFN5Q08AF3 891 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 TEX13AQ9BXU3 409 aaPredicted RBP9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 CASZ1Q86V15 1759 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 ARFGEF2Q9Y6D5 1785 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
HMGXB3-204ENST00000513318 N4BP2Q86UW6 1770 aaPredicted RBP9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 ITPK1Q13572 414 aa9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 DNAJC10Q8IXB1 793 aa9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 CDCA7LQ96GN5 454 aa9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 AFDNP55196 1824 aaKnown RBP9.81□□□□□ -0.84
HMGXB3-204ENST00000513318 COL24A1Q17RW2 1714 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 RGL2O15211 777 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 STARD3NLO95772 234 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 KCNQ4P56696 695 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
HMGXB3-204ENST00000513318 CYP19A1P11511 503 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 CRKLP46109 303 aaKnown RBP9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 TWISTNBQ3B726 338 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 CHMP4AQ9BY43 222 aa9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms