RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 GYS1P13807 737 aa23.41■■□□□ 1.34
DDR1-272ENST00000513243 CCDC184Q52MB2 194 aa23.41■■□□□ 1.34
DDR1-272ENST00000513243 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
DDR1-272ENST00000513243 NLGN1Q8N2Q7 840 aa23.4■■□□□ 1.34
DDR1-272ENST00000513243 SRP68Q9UHB9 627 aaKnown RBP23.4■■□□□ 1.34
DDR1-272ENST00000513243 RRP7AQ9Y3A4 280 aaKnown RBP23.4■■□□□ 1.34
DDR1-272ENST00000513243 CANXP27824 592 aaKnown RBP23.39■■□□□ 1.33
DDR1-272ENST00000513243 C4AP0C0L4 1744 aa23.39■■□□□ 1.33
DDR1-272ENST00000513243 USP42Q9H9J4 1324 aaKnown RBP23.38■■□□□ 1.33
DDR1-272ENST00000513243 ANP32CO43423 234 aa23.38■■□□□ 1.33
DDR1-272ENST00000513243 MMP10P09238 476 aa23.38■■□□□ 1.33
DDR1-272ENST00000513243 NLGN2Q8NFZ4 835 aa23.38■■□□□ 1.33
DDR1-272ENST00000513243 PNISRQ8TF01 805 aaKnown RBP23.38■■□□□ 1.33
DDR1-272ENST00000513243 PRAMEF22A3QJZ6 481 aa23.37■■□□□ 1.33
DDR1-272ENST00000513243 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
DDR1-272ENST00000513243 NEUROD2Q15784 382 aa23.37■■□□□ 1.33
DDR1-272ENST00000513243 USP16Q9Y5T5 823 aa23.37■■□□□ 1.33
DDR1-272ENST00000513243 A1BGP04217 495 aa23.36■■□□□ 1.33
DDR1-272ENST00000513243 CD2APQ9Y5K6 639 aa23.36■■□□□ 1.33
DDR1-272ENST00000513243 COL15A1P39059 1388 aa23.36■■□□□ 1.33
DDR1-272ENST00000513243 DCAF8L1A6NGE4 600 aa23.35■■□□□ 1.33
DDR1-272ENST00000513243 EIF5P55010 431 aaKnown RBP23.35■■□□□ 1.33
DDR1-272ENST00000513243 LMOD3Q0VAK6 560 aa23.35■■□□□ 1.33
DDR1-272ENST00000513243 FKBP8Q14318 412 aa23.35■■□□□ 1.33
DDR1-272ENST00000513243 ZPR1O75312 459 aa23.34■■□□□ 1.33
DDR1-272ENST00000513243 USPL1Q5W0Q7 1092 aa23.34■■□□□ 1.33
DDR1-272ENST00000513243 NARFQ9UHQ1 456 aa23.34■■□□□ 1.33
DDR1-272ENST00000513243 TRIM35Q9UPQ4 493 aa23.33■■□□□ 1.33
DDR1-272ENST00000513243 EIF4A1P60842 406 aaKnown RBP23.32■■□□□ 1.32
DDR1-272ENST00000513243 KDM3BQ7LBC6 1761 aa23.32■■□□□ 1.32
DDR1-272ENST00000513243 IL6STP40189 918 aaPredicted RBP23.31■■□□□ 1.32
DDR1-272ENST00000513243 PIP4K2AP48426 406 aaPredicted RBP23.3■■□□□ 1.32
DDR1-272ENST00000513243 BCL2L12Q9HB09 334 aa23.3■■□□□ 1.32
DDR1-272ENST00000513243 ZNF330Q9Y3S2 320 aaPredicted RBP23.3■■□□□ 1.32
DDR1-272ENST00000513243 A0A087WZG4 1122 aa23.29■■□□□ 1.32
DDR1-272ENST00000513243 APAF1O14727 1248 aa23.29■■□□□ 1.32
DDR1-272ENST00000513243 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
DDR1-272ENST00000513243 TM4SF1P30408 202 aa23.29■■□□□ 1.32
DDR1-272ENST00000513243 MRS2Q9HD23 443 aa23.29■■□□□ 1.32
DDR1-272ENST00000513243 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
DDR1-272ENST00000513243 PARP3Q9Y6F1 533 aa23.29■■□□□ 1.32
DDR1-272ENST00000513243 DDR1Q08345 913 aa23.28■■□□□ 1.32
DDR1-272ENST00000513243 BABAM1Q9NWV8 329 aa23.28■■□□□ 1.32
DDR1-272ENST00000513243 TBC1D2BQ9UPU7 963 aa23.27■■□□□ 1.32
DDR1-272ENST00000513243 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
DDR1-272ENST00000513243 GPR162Q16538 588 aa23.26■■□□□ 1.31
DDR1-272ENST00000513243 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
DDR1-272ENST00000513243 NBPF15Q8N660 670 aa23.26■■□□□ 1.31
DDR1-272ENST00000513243 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
DDR1-272ENST00000513243 NFIXQ14938 502 aa23.25■■□□□ 1.31
DDR1-272ENST00000513243 NPM2Q86SE8 214 aaKnown RBP23.25■■□□□ 1.31
DDR1-272ENST00000513243 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
DDR1-272ENST00000513243 CHL1O00533 1208 aa23.24■■□□□ 1.31
DDR1-272ENST00000513243 C10orf71Q711Q0 1435 aa23.24■■□□□ 1.31
DDR1-272ENST00000513243 CAMTA2O94983 1202 aa23.22■■□□□ 1.31
DDR1-272ENST00000513243 YBX3P16989 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
DDR1-272ENST00000513243 DZIP3Q86Y13 1208 aaKnown RBP23.22■■□□□ 1.31
DDR1-272ENST00000513243 LAS1LQ9Y4W2 734 aaKnown RBP23.22■■□□□ 1.31
DDR1-272ENST00000513243 KIF13BQ9NQT8 1826 aa23.2■■□□□ 1.3
DDR1-272ENST00000513243 LAMB4A4D0S4 1761 aa23.2■■□□□ 1.3
DDR1-272ENST00000513243 TGFB2P61812 414 aa23.2■■□□□ 1.3
DDR1-272ENST00000513243 TBC1D9BQ66K14 1250 aa23.2■■□□□ 1.3
DDR1-272ENST00000513243 BICDL1Q6ZP65 573 aa23.2■■□□□ 1.3
DDR1-272ENST00000513243 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
DDR1-272ENST00000513243 PXDNLA1KZ92 1463 aa23.18■■□□□ 1.3
DDR1-272ENST00000513243 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
DDR1-272ENST00000513243 SERPINB2P05120 415 aa23.18■■□□□ 1.3
DDR1-272ENST00000513243 CFAP44Q96MT7 982 aa23.18■■□□□ 1.3
DDR1-272ENST00000513243 SCN7AQ01118 1682 aa23.18■■□□□ 1.3
DDR1-272ENST00000513243 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
DDR1-272ENST00000513243 KRT24Q2M2I5 525 aa23.17■■□□□ 1.3
DDR1-272ENST00000513243 DPEP1P16444 411 aa23.16■■□□□ 1.3
DDR1-272ENST00000513243 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
DDR1-272ENST00000513243 ZNF853P0CG23 659 aa23.15■■□□□ 1.3
DDR1-272ENST00000513243 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
DDR1-272ENST00000513243 YY1P25490 414 aa23.15■■□□□ 1.3
DDR1-272ENST00000513243 NGEFQ8N5V2 710 aa23.15■■□□□ 1.3
DDR1-272ENST00000513243 ERBB4Q15303 1308 aa23.14■■□□□ 1.3
DDR1-272ENST00000513243 GRIN3BO60391 1043 aa23.14■■□□□ 1.29
DDR1-272ENST00000513243 MYL6BP14649 208 aa23.14■■□□□ 1.29
DDR1-272ENST00000513243 CLEC4GQ6UXB4 293 aa23.14■■□□□ 1.29
DDR1-272ENST00000513243 MBIPQ9NS73 344 aa23.14■■□□□ 1.29
DDR1-272ENST00000513243 NRXN2Q9P2S2 1712 aa23.13■■□□□ 1.29
DDR1-272ENST00000513243 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
DDR1-272ENST00000513243 KCNA3P22001 575 aa23.13■■□□□ 1.29
DDR1-272ENST00000513243 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
DDR1-272ENST00000513243 PDIA6Q15084 440 aa23.13■■□□□ 1.29
DDR1-272ENST00000513243 SETDB2Q96T68 719 aa23.13■■□□□ 1.29
DDR1-272ENST00000513243 IFT57Q9NWB7 429 aa23.13■■□□□ 1.29
DDR1-272ENST00000513243 BCORQ6W2J9 1755 aa23.13■■□□□ 1.29
DDR1-272ENST00000513243 N4BP2Q86UW6 1770 aaPredicted RBP23.13■■□□□ 1.29
DDR1-272ENST00000513243 ZNF652Q9Y2D9 606 aa23.12■■□□□ 1.29
DDR1-272ENST00000513243 CARMIL3Q8ND23 1372 aa23.12■■□□□ 1.29
DDR1-272ENST00000513243 RGL2O15211 777 aa23.11■■□□□ 1.29
DDR1-272ENST00000513243 GNAI1P63096 354 aa23.11■■□□□ 1.29
DDR1-272ENST00000513243 HLFQ16534 295 aa23.11■■□□□ 1.29
DDR1-272ENST00000513243 CCDC27Q2M243 656 aa23.11■■□□□ 1.29
DDR1-272ENST00000513243 TTLL7Q6ZT98 887 aa23.11■■□□□ 1.29
DDR1-272ENST00000513243 NECTIN2Q92692 538 aa23.11■■□□□ 1.29
DDR1-272ENST00000513243 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms