RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 GNPATO15228 680 aa21.38■■□□□ 1.01
HMGCL-209ENST00000513148 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
HMGCL-209ENST00000513148 SMIM5Q71RC9 77 aa21.38■■□□□ 1.01
HMGCL-209ENST00000513148 WDR63Q8IWG1 891 aa21.38■■□□□ 1.01
HMGCL-209ENST00000513148 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
HMGCL-209ENST00000513148 CYP19A1P11511 503 aaPredicted RBP21.38■■□□□ 1.01
HMGCL-209ENST00000513148 PHF14O94880 888 aa21.37■■□□□ 1.01
HMGCL-209ENST00000513148 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
HMGCL-209ENST00000513148 ZNF521Q96K83 1311 aa21.37■■□□□ 1.01
HMGCL-209ENST00000513148 HMGB2P26583 209 aaKnown RBP21.36■■□□□ 1.01
HMGCL-209ENST00000513148 AMIGO3Q86WK7 504 aa21.36■■□□□ 1.01
HMGCL-209ENST00000513148 IL16Q14005 1332 aa21.36■■□□□ 1.01
HMGCL-209ENST00000513148 CNTNAP4Q9C0A0 1308 aa21.36■■□□□ 1.01
HMGCL-209ENST00000513148 GIGYF1O75420 1035 aaPredicted RBP21.36■■□□□ 1.01
HMGCL-209ENST00000513148 STARD3NLO95772 234 aa21.36■■□□□ 1.01
HMGCL-209ENST00000513148 SPINK5Q9NQ38 1064 aaPredicted RBP21.36■■□□□ 1.01
HMGCL-209ENST00000513148 PRKCSHP14314 528 aaPredicted RBP21.35■■□□□ 1.01
HMGCL-209ENST00000513148 FKBP8Q14318 412 aa21.35■■□□□ 1.01
HMGCL-209ENST00000513148 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
HMGCL-209ENST00000513148 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
HMGCL-209ENST00000513148 QSER1Q2KHR3 1735 aa21.35■■□□□ 1.01
HMGCL-209ENST00000513148 PDGFDQ9GZP0 370 aaPredicted RBP21.34■■□□□ 1.01
HMGCL-209ENST00000513148 CCDC87Q9NVE4 849 aa21.34■■□□□ 1.01
HMGCL-209ENST00000513148 ZBTB1Q9Y2K1 713 aa21.34■■□□□ 1.01
HMGCL-209ENST00000513148 NEFLP07196 543 aa21.34■■□□□ 1.01
HMGCL-209ENST00000513148 INTS5Q6P9B9 1019 aaKnown RBP21.34■■□□□ 1.01
HMGCL-209ENST00000513148 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
HMGCL-209ENST00000513148 MSH5O43196 834 aa21.33■■□□□ 1.01
HMGCL-209ENST00000513148 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1.01
HMGCL-209ENST00000513148 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1
HMGCL-209ENST00000513148 A1BGP04217 495 aa21.33■■□□□ 1
HMGCL-209ENST00000513148 CANXP27824 592 aaKnown RBP21.33■■□□□ 1
HMGCL-209ENST00000513148 RC3H1Q5TC82 1133 aaKnown RBP21.33■■□□□ 1
HMGCL-209ENST00000513148 RTCBQ9Y3I0 505 aaKnown RBP21.33■■□□□ 1
HMGCL-209ENST00000513148 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.32■■□□□ 1
HMGCL-209ENST00000513148 GOLGA2Q08379 1002 aa21.32■■□□□ 1
HMGCL-209ENST00000513148 NECTIN2Q92692 538 aa21.32■■□□□ 1
HMGCL-209ENST00000513148 ZNF330Q9Y3S2 320 aaPredicted RBP21.32■■□□□ 1
HMGCL-209ENST00000513148 CASZ1Q86V15 1759 aa21.32■■□□□ 1
HMGCL-209ENST00000513148 EIF2S2P20042 333 aaKnown RBP21.31■■□□□ 1
HMGCL-209ENST00000513148 RPS6KA4O75676 772 aa21.3■■□□□ 1
HMGCL-209ENST00000513148 DUSP27Q5VZP5 1158 aa21.3■■□□□ 1
HMGCL-209ENST00000513148 MYH16Q9H6N6 1097 aa21.3■■□□□ 1
HMGCL-209ENST00000513148 C4AP0C0L4 1744 aa21.3■■□□□ 1
HMGCL-209ENST00000513148 COL23A1Q86Y22 540 aaPredicted RBP21.29■■□□□ 1
HMGCL-209ENST00000513148 C8orf58Q8NAV2 365 aa21.29■■□□□ 1
HMGCL-209ENST00000513148 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
HMGCL-209ENST00000513148 SSFA2P28290 1259 aa21.29■■□□□ 1
HMGCL-209ENST00000513148 SOS1Q07889 1333 aaPredicted RBP21.28■■□□□ 1
HMGCL-209ENST00000513148 TSPYL6Q8N831 410 aa21.28■■□□□ 1
HMGCL-209ENST00000513148 COL15A1P39059 1388 aa21.27■■□□□ 1
HMGCL-209ENST00000513148 TRAPPC3LQ5T215 181 aa21.27■■□□□ 1
HMGCL-209ENST00000513148 E9PSI1 815 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 HDGFL1Q5TGJ6 251 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 ARHGEF1Q92888 912 aaKnown RBP21.26■□□□□ 0.99
HMGCL-209ENST00000513148 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 ZBTB7AO95365 584 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 MYL6BP14649 208 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
HMGCL-209ENST00000513148 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
HMGCL-209ENST00000513148 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
HMGCL-209ENST00000513148 SLFN5Q08AF3 891 aa21.25■□□□□ 0.99
HMGCL-209ENST00000513148 ARXQ96QS3 562 aa21.25■□□□□ 0.99
HMGCL-209ENST00000513148 HOXB7P09629 217 aa21.24■□□□□ 0.99
HMGCL-209ENST00000513148 RFC4P35249 363 aa21.24■□□□□ 0.99
HMGCL-209ENST00000513148 ANXA1P04083 346 aa21.24■□□□□ 0.99
HMGCL-209ENST00000513148 ADRA2BP18089 450 aa21.24■□□□□ 0.99
HMGCL-209ENST00000513148 TWISTNBQ3B726 338 aaPredicted RBP21.24■□□□□ 0.99
HMGCL-209ENST00000513148 NPM2Q86SE8 214 aaKnown RBP21.24■□□□□ 0.99
HMGCL-209ENST00000513148 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
HMGCL-209ENST00000513148 EIF5P55010 431 aaKnown RBP21.23■□□□□ 0.99
HMGCL-209ENST00000513148 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
HMGCL-209ENST00000513148 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
HMGCL-209ENST00000513148 SRP68Q9UHB9 627 aaKnown RBP21.22■□□□□ 0.99
HMGCL-209ENST00000513148 PROSER3Q2NL68 480 aa21.22■□□□□ 0.99
HMGCL-209ENST00000513148 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
HMGCL-209ENST00000513148 SRCAPQ6ZRS2 3230 aa21.21■□□□□ 0.99
HMGCL-209ENST00000513148 ATF5Q9Y2D1 282 aaPredicted RBP21.21■□□□□ 0.99
HMGCL-209ENST00000513148 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
HMGCL-209ENST00000513148 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
HMGCL-209ENST00000513148 PDIA6Q15084 440 aa21.19■□□□□ 0.98
HMGCL-209ENST00000513148 ERBB4Q15303 1308 aa21.19■□□□□ 0.98
HMGCL-209ENST00000513148 USP42Q9H9J4 1324 aaKnown RBP21.19■□□□□ 0.98
HMGCL-209ENST00000513148 ZPR1O75312 459 aa21.19■□□□□ 0.98
HMGCL-209ENST00000513148 USPL1Q5W0Q7 1092 aa21.19■□□□□ 0.98
HMGCL-209ENST00000513148 DZIP3Q86Y13 1208 aaKnown RBP21.19■□□□□ 0.98
HMGCL-209ENST00000513148 MTFR1LQ9H019 292 aa21.19■□□□□ 0.98
HMGCL-209ENST00000513148 SLC16A10Q8TF71 515 aa21.18■□□□□ 0.98
HMGCL-209ENST00000513148 SCN7AQ01118 1682 aa21.18■□□□□ 0.98
HMGCL-209ENST00000513148 A0A087WZG4 1122 aa21.17■□□□□ 0.98
HMGCL-209ENST00000513148 DDX21Q9NR30 783 aaKnown RBP eCLIP21.17■□□□□ 0.98
HMGCL-209ENST00000513148 DBF4Q9UBU7 674 aaPredicted RBP21.17■□□□□ 0.98
HMGCL-209ENST00000513148 BCORQ6W2J9 1755 aa21.17■□□□□ 0.98
HMGCL-209ENST00000513148 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
HMGCL-209ENST00000513148 ERICH6BQ5W0A0 696 aa21.17■□□□□ 0.98
HMGCL-209ENST00000513148 TRMT2AQ8IZ69 625 aaKnown RBP21.17■□□□□ 0.98
HMGCL-209ENST00000513148 VAMP4O75379 141 aa21.16■□□□□ 0.98
HMGCL-209ENST00000513148 GYS1P13807 737 aa21.16■□□□□ 0.98
HMGCL-209ENST00000513148 NARFQ9UHQ1 456 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms