RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 NBPF4Q96M43 638 aa11.55□□□□□ -0.56
SDHC-208ENST00000513009 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
SDHC-208ENST00000513009 TOGARAM1Q9Y4F4 1720 aa11.55□□□□□ -0.56
SDHC-208ENST00000513009 ITGB4P16144 1822 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
SDHC-208ENST00000513009 FBLN1P23142 703 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 TESK2Q96S53 571 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 UBR3Q6ZT12 1888 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
SDHC-208ENST00000513009 SMG6Q86US8 1419 aaKnown RBP11.53□□□□□ -0.56
SDHC-208ENST00000513009 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
SDHC-208ENST00000513009 RAPGEF4Q8WZA2 1011 aa11.53□□□□□ -0.56
SDHC-208ENST00000513009 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
SDHC-208ENST00000513009 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
SDHC-208ENST00000513009 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
SDHC-208ENST00000513009 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
SDHC-208ENST00000513009 TATP17735 454 aaPredicted RBP11.52□□□□□ -0.57
SDHC-208ENST00000513009 INSRP06213 1382 aa11.52□□□□□ -0.57
SDHC-208ENST00000513009 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
SDHC-208ENST00000513009 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
SDHC-208ENST00000513009 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
SDHC-208ENST00000513009 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
SDHC-208ENST00000513009 HSPA6P17066 643 aa11.51□□□□□ -0.57
SDHC-208ENST00000513009 RRS1Q15050 365 aaKnown RBP11.51□□□□□ -0.57
SDHC-208ENST00000513009 CDCA8Q53HL2 280 aa11.51□□□□□ -0.57
SDHC-208ENST00000513009 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
SDHC-208ENST00000513009 TMC2Q8TDI7 906 aa11.51□□□□□ -0.57
SDHC-208ENST00000513009 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
SDHC-208ENST00000513009 RYDENQ9NUL5 291 aaKnown RBP11.51□□□□□ -0.57
SDHC-208ENST00000513009 ST20-MTHFSA0A0A6YYL1 179 aa11.5□□□□□ -0.57
SDHC-208ENST00000513009 FYB1O15117 783 aa11.5□□□□□ -0.57
SDHC-208ENST00000513009 FLT4P35916 1363 aa11.5□□□□□ -0.57
SDHC-208ENST00000513009 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
SDHC-208ENST00000513009 CYP27B1O15528 508 aa11.49□□□□□ -0.57
SDHC-208ENST00000513009 ARSIQ5FYB1 569 aa11.49□□□□□ -0.57
SDHC-208ENST00000513009 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
SDHC-208ENST00000513009 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
SDHC-208ENST00000513009 AK7Q96M32 723 aa11.49□□□□□ -0.57
SDHC-208ENST00000513009 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
SDHC-208ENST00000513009 IGSF1Q8N6C5 1336 aa11.49□□□□□ -0.57
SDHC-208ENST00000513009 GOLGB1Q14789 3259 aaKnown RBP11.49□□□□□ -0.57
SDHC-208ENST00000513009 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
SDHC-208ENST00000513009 TMF1P82094 1093 aa11.48□□□□□ -0.57
SDHC-208ENST00000513009 HSP90AB2PQ58FF8 381 aa11.48□□□□□ -0.57
SDHC-208ENST00000513009 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
SDHC-208ENST00000513009 GGNBP2Q9H3C7 697 aa11.48□□□□□ -0.57
SDHC-208ENST00000513009 GPHNQ9NQX3 736 aaPredicted RBP11.48□□□□□ -0.57
SDHC-208ENST00000513009 KIF13BQ9NQT8 1826 aa11.48□□□□□ -0.57
SDHC-208ENST00000513009 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
SDHC-208ENST00000513009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.47□□□□□ -0.57
SDHC-208ENST00000513009 SLC34A2O95436 690 aa11.47□□□□□ -0.57
SDHC-208ENST00000513009 SSFA2P28290 1259 aa11.47□□□□□ -0.57
SDHC-208ENST00000513009 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
SDHC-208ENST00000513009 FOXK1P85037 733 aa11.46□□□□□ -0.57
SDHC-208ENST00000513009 ZNF526Q8TF50 670 aaPredicted RBP11.46□□□□□ -0.57
SDHC-208ENST00000513009 PIGBQ92521 554 aa11.46□□□□□ -0.57
SDHC-208ENST00000513009 KIAA1551Q9HCM1 1747 aa11.46□□□□□ -0.58
SDHC-208ENST00000513009 LOC102724428A0A0B4J2F2 783 aa11.45□□□□□ -0.58
SDHC-208ENST00000513009 SIK1P57059 783 aa11.45□□□□□ -0.58
SDHC-208ENST00000513009 ZNF831Q5JPB2 1677 aa11.44□□□□□ -0.58
SDHC-208ENST00000513009 PHF14O94880 888 aa11.44□□□□□ -0.58
SDHC-208ENST00000513009 LINC00116Q8NCU8 138 aa11.44□□□□□ -0.58
SDHC-208ENST00000513009 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
SDHC-208ENST00000513009 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
SDHC-208ENST00000513009 CEP350Q5VT06 3117 aa11.44□□□□□ -0.58
SDHC-208ENST00000513009 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
SDHC-208ENST00000513009 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
SDHC-208ENST00000513009 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
SDHC-208ENST00000513009 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
SDHC-208ENST00000513009 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
SDHC-208ENST00000513009 GNPATO15228 680 aa11.42□□□□□ -0.58
SDHC-208ENST00000513009 APLP1P51693 650 aa11.42□□□□□ -0.58
SDHC-208ENST00000513009 DSG2Q14126 1118 aa11.42□□□□□ -0.58
SDHC-208ENST00000513009 SMIM5Q71RC9 77 aa11.42□□□□□ -0.58
SDHC-208ENST00000513009 WWC3Q9ULE0 1092 aa11.42□□□□□ -0.58
SDHC-208ENST00000513009 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 MMP10P09238 476 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 TGFB2P61812 414 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 ITPK1Q13572 414 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 TMOD3Q9NYL9 352 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
SDHC-208ENST00000513009 WASHC2AQ641Q2 1341 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 ARFGEF1Q9Y6D6 1849 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 TOMM70O94826 608 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
SDHC-208ENST00000513009 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 C10orf71Q711Q0 1435 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
SDHC-208ENST00000513009 COL5A3P25940 1745 aaPredicted RBP11.4□□□□□ -0.58
SDHC-208ENST00000513009 KDRP35968 1356 aa11.4□□□□□ -0.59
SDHC-208ENST00000513009 PHKG2P15735 406 aa11.39□□□□□ -0.59
SDHC-208ENST00000513009 IFNL2Q8IZJ0 200 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms