RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TTLL8A6PVC2 850 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 H3BRB1 525 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 NOS2P35228 1153 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 SERPINB4P48594 390 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 RNF144AP50876 292 aaPredicted RBP7.18□□□□□ -1.26
HTT-210ENST00000512909 SF3B2Q13435 895 aaKnown RBP7.18□□□□□ -1.26
HTT-210ENST00000512909 HIF1AQ16665 826 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 C16orf46Q6P387 395 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 PRICKLE2Q7Z3G6 844 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 PPARGC1BQ86YN6 1023 aaKnown RBP7.18□□□□□ -1.26
HTT-210ENST00000512909 TTC16Q8NEE8 873 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 GTF3C2Q8WUA4 911 aaPredicted RBP7.18□□□□□ -1.26
HTT-210ENST00000512909 L3MBTL2Q969R5 705 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 COL26A1Q96A83 441 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 TUT1Q9H6E5 874 aaKnown RBP7.18□□□□□ -1.26
HTT-210ENST00000512909 HCN4Q9Y3Q4 1203 aa7.18□□□□□ -1.26
HTT-210ENST00000512909 MAN1A2O60476 641 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 PHKA2P46019 1235 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
HTT-210ENST00000512909 TEAD4Q15561 434 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 SND1Q7KZF4 910 aaKnown RBP eCLIP7.17□□□□□ -1.26
HTT-210ENST00000512909 TXNDC2Q86VQ3 553 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 STAG2Q8N3U4 1231 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 ANO2Q9NQ90 1003 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 EGFL7Q9UHF1 273 aa7.17□□□□□ -1.26
HTT-210ENST00000512909 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 CTSOP43234 321 aaPredicted RBP7.16□□□□□ -1.26
HTT-210ENST00000512909 EPHA4P54764 986 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 FOXK2Q01167 660 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
HTT-210ENST00000512909 PGBD3Q8N328 593 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 ABTB2Q8N961 1025 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 RHPN1Q8TCX5 695 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 C2orf49Q9BVC5 232 aaPredicted RBP7.16□□□□□ -1.26
HTT-210ENST00000512909 TIMMDC1Q9NPL8 285 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 SLAIN2Q9P270 581 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 SEPT3Q9UH03 358 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 PARP3Q9Y6F1 533 aa7.16□□□□□ -1.26
HTT-210ENST00000512909 FAM13AO94988 1023 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 AVPP01185 164 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 BMP1P13497 986 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 MFAP1P55081 439 aaKnown RBP7.15□□□□□ -1.26
HTT-210ENST00000512909 POU4F2Q12837 409 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 ARSJQ5FYB0 599 aaPredicted RBP7.15□□□□□ -1.26
HTT-210ENST00000512909 ALKBH2Q6NS38 261 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 PHLDB3Q6NSJ2 640 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
HTT-210ENST00000512909 FHDC1Q9C0D6 1143 aaPredicted RBP7.15□□□□□ -1.26
HTT-210ENST00000512909 GRIP2Q9C0E4 1043 aa7.15□□□□□ -1.26
HTT-210ENST00000512909 SOWAHDA6NJG2 315 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 C21orf2O43822 256 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 PCSK2P16519 638 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 BRD2P25440 801 aaKnown RBP7.14□□□□□ -1.27
HTT-210ENST00000512909 SCNN1AP37088 669 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 SMCPP49901 116 aaPredicted RBP7.14□□□□□ -1.27
HTT-210ENST00000512909 C4orf17Q53FE4 359 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 ALDH16A1Q8IZ83 802 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 HELQQ8TDG4 1101 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 TMC1Q8TDI8 760 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 PHACTR1Q9C0D0 580 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 BCL11AQ9H165 835 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 SENP2Q9HC62 589 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 ANKIB1Q9P2G1 1089 aa7.14□□□□□ -1.27
HTT-210ENST00000512909 RHOQP17081 205 aa7.13□□□□□ -1.27
HTT-210ENST00000512909 RTN1Q16799 776 aa7.13□□□□□ -1.27
HTT-210ENST00000512909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.13□□□□□ -1.27
HTT-210ENST00000512909 NBPF10Q6P3W6 841 aaKnown RBP7.13□□□□□ -1.27
HTT-210ENST00000512909 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
HTT-210ENST00000512909 FAM13BQ9NYF5 915 aa7.13□□□□□ -1.27
HTT-210ENST00000512909 SPATA31C2B4DYI2 1134 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 NDUFB5O43674 189 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 ICMTO60725 284 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 C11orf91Q3C1V1 193 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 C1orf53Q5VUE5 145 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 FOXD4L5Q5VV16 416 aaPredicted RBP7.12□□□□□ -1.27
HTT-210ENST00000512909 RNF217Q8TC41 542 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 KIFC2Q96AC6 838 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 GAS2L1Q99501 681 aaPredicted RBP7.12□□□□□ -1.27
HTT-210ENST00000512909 STIM2Q9P246 746 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 BRPF3Q9ULD4 1205 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 IQSEC3Q9UPP2 1182 aaPredicted RBP7.12□□□□□ -1.27
HTT-210ENST00000512909 HRH3Q9Y5N1 445 aa7.12□□□□□ -1.27
HTT-210ENST00000512909 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
HTT-210ENST00000512909 A0A1B0GTH6 734 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 EML1O00423 815 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 LCE2BO14633 110 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 MAPK1P28482 360 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 MARSP56192 900 aaKnown RBP7.11□□□□□ -1.27
HTT-210ENST00000512909 DGKZQ13574 1117 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 NOM1Q5C9Z4 860 aaKnown RBP7.11□□□□□ -1.27
HTT-210ENST00000512909 WDR44Q5JSH3 913 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 ZSCAN29Q8IWY8 852 aaPredicted RBP7.11□□□□□ -1.27
HTT-210ENST00000512909 ZDHHC3Q9NYG2 299 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
HTT-210ENST00000512909 HIRAP54198 1017 aaPredicted RBP7.1□□□□□ -1.27
HTT-210ENST00000512909 RIPOR1Q6ZS17 1223 aa7.1□□□□□ -1.27
HTT-210ENST00000512909 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
HTT-210ENST00000512909 ATP13A2Q9NQ11 1180 aa7.1□□□□□ -1.27
HTT-210ENST00000512909 SOS2Q07890 1332 aaPredicted RBP7.09□□□□□ -1.27
HTT-210ENST00000512909 MTMR3Q13615 1198 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms