RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
YIPF3-216ENST00000512713 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
YIPF3-216ENST00000512713 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.45
YIPF3-216ENST00000512713 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
YIPF3-216ENST00000512713 COL15A1P39059 1388 aa12.2□□□□□ -0.46
YIPF3-216ENST00000512713 HEG1Q9ULI3 1381 aa12.2□□□□□ -0.46
YIPF3-216ENST00000512713 EIF5P55010 431 aaKnown RBP12.2□□□□□ -0.46
YIPF3-216ENST00000512713 NFIXQ14938 502 aa12.2□□□□□ -0.46
YIPF3-216ENST00000512713 DALRD3Q5D0E6 543 aaKnown RBP12.2□□□□□ -0.46
YIPF3-216ENST00000512713 MCM10Q7L590 875 aa12.2□□□□□ -0.46
YIPF3-216ENST00000512713 PXDNLA1KZ92 1463 aa12.2□□□□□ -0.46
YIPF3-216ENST00000512713 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
YIPF3-216ENST00000512713 TAF1LQ8IZX4 1826 aa12.19□□□□□ -0.46
YIPF3-216ENST00000512713 IL6STP40189 918 aaPredicted RBP12.19□□□□□ -0.46
YIPF3-216ENST00000512713 UBR3Q6ZT12 1888 aa12.19□□□□□ -0.46
YIPF3-216ENST00000512713 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
YIPF3-216ENST00000512713 SERPINB2P05120 415 aa12.18□□□□□ -0.46
YIPF3-216ENST00000512713 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
YIPF3-216ENST00000512713 KCNA3P22001 575 aa12.18□□□□□ -0.46
YIPF3-216ENST00000512713 RALBP1Q15311 655 aa12.18□□□□□ -0.46
YIPF3-216ENST00000512713 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
YIPF3-216ENST00000512713 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
YIPF3-216ENST00000512713 ZNF526Q8TF50 670 aaPredicted RBP12.18□□□□□ -0.46
YIPF3-216ENST00000512713 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
YIPF3-216ENST00000512713 CICQ96RK0 1608 aaPredicted RBP12.18□□□□□ -0.46
YIPF3-216ENST00000512713 KCNQ3O43525 872 aa12.17□□□□□ -0.46
YIPF3-216ENST00000512713 A1BGP04217 495 aa12.17□□□□□ -0.46
YIPF3-216ENST00000512713 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
YIPF3-216ENST00000512713 PNISRQ8TF01 805 aaKnown RBP12.17□□□□□ -0.46
YIPF3-216ENST00000512713 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
YIPF3-216ENST00000512713 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
YIPF3-216ENST00000512713 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
YIPF3-216ENST00000512713 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
YIPF3-216ENST00000512713 NPHP1O15259 732 aa12.16□□□□□ -0.46
YIPF3-216ENST00000512713 CHRNA5P30532 468 aa12.16□□□□□ -0.46
YIPF3-216ENST00000512713 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
YIPF3-216ENST00000512713 H0YIN7 160 aa12.15□□□□□ -0.46
YIPF3-216ENST00000512713 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
YIPF3-216ENST00000512713 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
YIPF3-216ENST00000512713 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
YIPF3-216ENST00000512713 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
YIPF3-216ENST00000512713 TBC1D9BQ66K14 1250 aa12.14□□□□□ -0.47
YIPF3-216ENST00000512713 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
YIPF3-216ENST00000512713 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
YIPF3-216ENST00000512713 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
YIPF3-216ENST00000512713 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
YIPF3-216ENST00000512713 ADCY9O60503 1353 aa12.14□□□□□ -0.47
YIPF3-216ENST00000512713 PDE6BP35913 854 aa12.13□□□□□ -0.47
YIPF3-216ENST00000512713 C9orf131Q5VYM1 1079 aa12.13□□□□□ -0.47
YIPF3-216ENST00000512713 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
YIPF3-216ENST00000512713 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
YIPF3-216ENST00000512713 MIS18AQ9NYP9 233 aa12.13□□□□□ -0.47
YIPF3-216ENST00000512713 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
YIPF3-216ENST00000512713 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 CAMTA2O94983 1202 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 CNBD1Q8NA66 436 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 CARMIL3Q8ND23 1372 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
YIPF3-216ENST00000512713 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
YIPF3-216ENST00000512713 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
YIPF3-216ENST00000512713 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
YIPF3-216ENST00000512713 ST5P78524 1137 aa12.11□□□□□ -0.47
YIPF3-216ENST00000512713 TJP1Q07157 1748 aa12.11□□□□□ -0.47
YIPF3-216ENST00000512713 RGL2O15211 777 aa12.1□□□□□ -0.47
YIPF3-216ENST00000512713 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
YIPF3-216ENST00000512713 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
YIPF3-216ENST00000512713 NBPF5PQ86XG9 351 aaPredicted RBP12.1□□□□□ -0.47
YIPF3-216ENST00000512713 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
YIPF3-216ENST00000512713 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
YIPF3-216ENST00000512713 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
YIPF3-216ENST00000512713 RIPK4P57078 832 aa12.09□□□□□ -0.47
YIPF3-216ENST00000512713 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
YIPF3-216ENST00000512713 TPTE2Q6XPS3 522 aa12.09□□□□□ -0.47
YIPF3-216ENST00000512713 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
YIPF3-216ENST00000512713 KDM2BQ8NHM5 1336 aa12.09□□□□□ -0.47
YIPF3-216ENST00000512713 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
YIPF3-216ENST00000512713 NBPF26B4DH59 902 aa12.08□□□□□ -0.48
YIPF3-216ENST00000512713 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
YIPF3-216ENST00000512713 NBPF10Q6P3W6 841 aaKnown RBP12.08□□□□□ -0.48
YIPF3-216ENST00000512713 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
YIPF3-216ENST00000512713 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
YIPF3-216ENST00000512713 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
YIPF3-216ENST00000512713 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
YIPF3-216ENST00000512713 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
YIPF3-216ENST00000512713 KIF3CO14782 793 aa12.07□□□□□ -0.48
YIPF3-216ENST00000512713 LMNB1P20700 586 aa12.07□□□□□ -0.48
YIPF3-216ENST00000512713 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
YIPF3-216ENST00000512713 NGEFQ8N5V2 710 aa12.07□□□□□ -0.48
YIPF3-216ENST00000512713 CNKSR1Q969H4 720 aa12.07□□□□□ -0.48
YIPF3-216ENST00000512713 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
YIPF3-216ENST00000512713 CHD4Q14839 1912 aa12.06□□□□□ -0.48
YIPF3-216ENST00000512713 TOMM70O94826 608 aa12.06□□□□□ -0.48
YIPF3-216ENST00000512713 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
YIPF3-216ENST00000512713 STYK1Q6J9G0 422 aa12.06□□□□□ -0.48
YIPF3-216ENST00000512713 KIF6Q6ZMV9 814 aa12.06□□□□□ -0.48
YIPF3-216ENST00000512713 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
YIPF3-216ENST00000512713 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
YIPF3-216ENST00000512713 C21orf2O43822 256 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms