RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CCAR1Q8IX12 1150 aaKnown RBP8.22□□□□□ -1.09
CHD1-208ENST00000512392 TUT1Q9H6E5 874 aaKnown RBP8.22□□□□□ -1.09
CHD1-208ENST00000512392 BDNFP23560 247 aa8.22□□□□□ -1.09
CHD1-208ENST00000512392 PTK2Q05397 1052 aa8.22□□□□□ -1.09
CHD1-208ENST00000512392 JDP2Q8WYK2 163 aa8.22□□□□□ -1.09
CHD1-208ENST00000512392 SKOR1P84550 965 aa8.21□□□□□ -1.09
CHD1-208ENST00000512392 AMPD3Q01432 767 aa8.21□□□□□ -1.09
CHD1-208ENST00000512392 SH3BP5LQ7L8J4 393 aa8.21□□□□□ -1.09
CHD1-208ENST00000512392 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.09
CHD1-208ENST00000512392 SPC25Q9HBM1 224 aa8.21□□□□□ -1.09
CHD1-208ENST00000512392 KCNG1Q9UIX4 513 aa8.21□□□□□ -1.09
CHD1-208ENST00000512392 P4HBP07237 508 aaKnown RBP8.2□□□□□ -1.1
CHD1-208ENST00000512392 PDE6BP35913 854 aa8.2□□□□□ -1.1
CHD1-208ENST00000512392 MAP9Q49MG5 647 aa8.2□□□□□ -1.1
CHD1-208ENST00000512392 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 ZNF697Q5TEC3 545 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 DEPDC4Q8N2C3 294 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 FOXJ1Q92949 421 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 COMMD10Q9Y6G5 202 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L12C9JPN9 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L21D6R901 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 PRC1O43663 620 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 SOX11P35716 441 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 AGERQ15109 404 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
CHD1-208ENST00000512392 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 DCTN4Q9UJW0 460 aa8.19□□□□□ -1.1
CHD1-208ENST00000512392 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
CHD1-208ENST00000512392 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 WNT7AO00755 349 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 ICMTO60725 284 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 DNAJC6O75061 913 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
CHD1-208ENST00000512392 NR1H3Q13133 447 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 PNISRQ8TF01 805 aaKnown RBP8.18□□□□□ -1.1
CHD1-208ENST00000512392 RNF34Q969K3 372 aa8.18□□□□□ -1.1
CHD1-208ENST00000512392 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 PDGFRBP09619 1106 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 CBLBQ13191 982 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 PTK7Q13308 1070 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 IER2Q9BTL4 223 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 FBXO45P0C2W1 286 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 ARHGAP4P98171 946 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 MYBPC2Q14324 1141 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 COL19A1Q14993 1142 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 RAVER1Q8IY67 606 aaKnown RBP8.17□□□□□ -1.1
CHD1-208ENST00000512392 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 IL17RAQ96F46 866 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 OCSTAMPQ9BR26 566 aa8.17□□□□□ -1.1
CHD1-208ENST00000512392 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.17□□□□□ -1.1
CHD1-208ENST00000512392 EXOC5O00471 708 aa8.16□□□□□ -1.1
CHD1-208ENST00000512392 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
CHD1-208ENST00000512392 GLYCTKQ8IVS8 523 aa8.16□□□□□ -1.1
CHD1-208ENST00000512392 ZSCAN29Q8IWY8 852 aaPredicted RBP8.16□□□□□ -1.1
CHD1-208ENST00000512392 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
CHD1-208ENST00000512392 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
CHD1-208ENST00000512392 TMX4Q9H1E5 349 aaPredicted RBP8.16□□□□□ -1.1
CHD1-208ENST00000512392 THRAP3Q9Y2W1 955 aaKnown RBP8.16□□□□□ -1.1
CHD1-208ENST00000512392 ARID5AQ03989 594 aa8.15□□□□□ -1.1
CHD1-208ENST00000512392 FAM174AQ8TBP5 190 aa8.15□□□□□ -1.1
CHD1-208ENST00000512392 PKD2L1Q9P0L9 805 aa8.15□□□□□ -1.1
CHD1-208ENST00000512392 FBXO9Q9UK97 447 aaPredicted RBP8.15□□□□□ -1.1
CHD1-208ENST00000512392 WWC3Q9ULE0 1092 aa8.15□□□□□ -1.1
CHD1-208ENST00000512392 MAGEB6P1A0A0J9YX57 407 aa8.15□□□□□ -1.11
CHD1-208ENST00000512392 MTMR3Q13615 1198 aa8.15□□□□□ -1.11
CHD1-208ENST00000512392 MCF2L2Q86YR7 1114 aa8.15□□□□□ -1.11
CHD1-208ENST00000512392 ADAM32Q8TC27 787 aa8.15□□□□□ -1.11
CHD1-208ENST00000512392 TSR2Q969E8 191 aaKnown RBP8.15□□□□□ -1.11
CHD1-208ENST00000512392 SCYL1Q96KG9 808 aa8.15□□□□□ -1.11
CHD1-208ENST00000512392 QTRT2Q9H974 415 aaKnown RBP8.15□□□□□ -1.11
CHD1-208ENST00000512392 BSDC1Q9NW68 430 aaPredicted RBP8.15□□□□□ -1.11
CHD1-208ENST00000512392 MKRN1Q9UHC7 482 aaKnown RBP8.15□□□□□ -1.11
CHD1-208ENST00000512392 NRBP1Q9UHY1 535 aa8.15□□□□□ -1.11
CHD1-208ENST00000512392 XRCC5P13010 732 aaKnown RBP8.14□□□□□ -1.11
CHD1-208ENST00000512392 UBE4AQ14139 1066 aa8.14□□□□□ -1.11
CHD1-208ENST00000512392 ENOX2Q16206 610 aaKnown RBP8.14□□□□□ -1.11
CHD1-208ENST00000512392 AMOTL1Q8IY63 956 aa8.14□□□□□ -1.11
CHD1-208ENST00000512392 SECISBP2LQ93073 1101 aaKnown RBP8.14□□□□□ -1.11
CHD1-208ENST00000512392 CARD14Q9BXL6 1004 aa8.14□□□□□ -1.11
CHD1-208ENST00000512392 EGFL7Q9UHF1 273 aa8.14□□□□□ -1.11
CHD1-208ENST00000512392 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
CHD1-208ENST00000512392 GDF9O60383 454 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 LMOD3Q0VAK6 560 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 FOXC1Q12948 553 aa8.13□□□□□ -1.11
CHD1-208ENST00000512392 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms