RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 ZBTB7AO95365 584 aa9.69□□□□□ -0.86
NR1I3-231ENST00000512340 CYP19A1P11511 503 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-231ENST00000512340 PNPLA7Q6ZV29 1317 aa9.69□□□□□ -0.86
NR1I3-231ENST00000512340 NLGN1Q8N2Q7 840 aa9.69□□□□□ -0.86
NR1I3-231ENST00000512340 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
NR1I3-231ENST00000512340 SYT17Q9BSW7 474 aa9.69□□□□□ -0.86
NR1I3-231ENST00000512340 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
NR1I3-231ENST00000512340 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
NR1I3-231ENST00000512340 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
NR1I3-231ENST00000512340 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-231ENST00000512340 CCDC184Q52MB2 194 aa9.68□□□□□ -0.86
NR1I3-231ENST00000512340 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
NR1I3-231ENST00000512340 COL23A1Q86Y22 540 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-231ENST00000512340 ARXQ96QS3 562 aa9.68□□□□□ -0.86
NR1I3-231ENST00000512340 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
NR1I3-231ENST00000512340 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-231ENST00000512340 ATF5Q9Y2D1 282 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-231ENST00000512340 ZNF330Q9Y3S2 320 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-231ENST00000512340 TAF1LQ8IZX4 1826 aa9.68□□□□□ -0.86
NR1I3-231ENST00000512340 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 IL16Q14005 1332 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 ERBB4Q15303 1308 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 CHL1O00533 1208 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 HOXB7P09629 217 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 CANXP27824 592 aaKnown RBP9.67□□□□□ -0.86
NR1I3-231ENST00000512340 IL6STP40189 918 aaPredicted RBP9.67□□□□□ -0.86
NR1I3-231ENST00000512340 EIF4A1P60842 406 aaKnown RBP9.67□□□□□ -0.86
NR1I3-231ENST00000512340 WDR63Q8IWG1 891 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 MYH16Q9H6N6 1097 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 MIS18AQ9NYP9 233 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 QSER1Q2KHR3 1735 aa9.67□□□□□ -0.86
NR1I3-231ENST00000512340 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-231ENST00000512340 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
NR1I3-231ENST00000512340 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
NR1I3-231ENST00000512340 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
NR1I3-231ENST00000512340 KCPQ6ZWJ8 1503 aa9.66□□□□□ -0.86
NR1I3-231ENST00000512340 SIPA1L3O60292 1781 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-231ENST00000512340 KCNQ3O43525 872 aa9.65□□□□□ -0.86
NR1I3-231ENST00000512340 INTS5Q6P9B9 1019 aaKnown RBP9.65□□□□□ -0.86
NR1I3-231ENST00000512340 KIF6Q6ZMV9 814 aa9.65□□□□□ -0.86
NR1I3-231ENST00000512340 SGIP1Q9BQI5 828 aa9.65□□□□□ -0.86
NR1I3-231ENST00000512340 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
NR1I3-231ENST00000512340 UBR2Q8IWV8 1755 aa9.65□□□□□ -0.87
NR1I3-231ENST00000512340 COL15A1P39059 1388 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
NR1I3-231ENST00000512340 RGL2O15211 777 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 NPHP1O15259 732 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 A1BGP04217 495 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 EIF2S2P20042 333 aaKnown RBP9.64□□□□□ -0.87
NR1I3-231ENST00000512340 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
NR1I3-231ENST00000512340 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 NARFQ9UHQ1 456 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 ZBTB1Q9Y2K1 713 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 SALL2Q9Y467 1007 aaPredicted RBP9.64□□□□□ -0.87
NR1I3-231ENST00000512340 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
NR1I3-231ENST00000512340 USP42Q9H9J4 1324 aaKnown RBP9.63□□□□□ -0.87
NR1I3-231ENST00000512340 GPR162Q16538 588 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
NR1I3-231ENST00000512340 MIER1Q8N108 512 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 STK31Q9BXU1 1019 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 MBIPQ9NS73 344 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 UBR3Q6ZT12 1888 aa9.63□□□□□ -0.87
NR1I3-231ENST00000512340 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-231ENST00000512340 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 ZNF853P0CG23 659 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 CCDC30Q5VVM6 783 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 PDGFDQ9GZP0 370 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-231ENST00000512340 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
NR1I3-231ENST00000512340 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 TJP1Q07157 1748 aa9.62□□□□□ -0.87
NR1I3-231ENST00000512340 KDM3BQ7LBC6 1761 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 E9PSI1 815 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 DDX58O95786 925 aaKnown RBP9.61□□□□□ -0.87
NR1I3-231ENST00000512340 MMP10P09238 476 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 GYS1P13807 737 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 USPL1Q5W0Q7 1092 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 DDX21Q9NR30 783 aaKnown RBP eCLIP9.61□□□□□ -0.87
NR1I3-231ENST00000512340 HYPKQ9NX55 129 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 CD2APQ9Y5K6 639 aa9.61□□□□□ -0.87
NR1I3-231ENST00000512340 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
NR1I3-231ENST00000512340 ERVV-1B6SEH8 477 aa9.6□□□□□ -0.87
NR1I3-231ENST00000512340 MYL6BP14649 208 aa9.6□□□□□ -0.87
NR1I3-231ENST00000512340 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-231ENST00000512340 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
NR1I3-231ENST00000512340 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
NR1I3-231ENST00000512340 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
NR1I3-231ENST00000512340 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
NR1I3-231ENST00000512340 TWISTNBQ3B726 338 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-231ENST00000512340 SRP68Q9UHB9 627 aaKnown RBP9.59□□□□□ -0.87
NR1I3-231ENST00000512340 COL24A1Q17RW2 1714 aa9.59□□□□□ -0.87
NR1I3-231ENST00000512340 TUBGCP6Q96RT7 1819 aa9.59□□□□□ -0.88
NR1I3-231ENST00000512340 PRAMEF22A3QJZ6 481 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms