RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 DCDC2BA2VCK2 349 aa11.21□□□□□ -0.61
NPHP3-210ENST00000512094 SCNN1DP51172 638 aa11.21□□□□□ -0.61
NPHP3-210ENST00000512094 GDF10P55107 478 aa11.21□□□□□ -0.61
NPHP3-210ENST00000512094 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
NPHP3-210ENST00000512094 INHAP05111 366 aa11.2□□□□□ -0.62
NPHP3-210ENST00000512094 ADH6P28332 368 aa11.2□□□□□ -0.62
NPHP3-210ENST00000512094 NIFKQ9BYG3 293 aaKnown RBP11.2□□□□□ -0.62
NPHP3-210ENST00000512094 CD33P20138 364 aa11.19□□□□□ -0.62
NPHP3-210ENST00000512094 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
NPHP3-210ENST00000512094 HCN2Q9UL51 889 aa11.18□□□□□ -0.62
NPHP3-210ENST00000512094 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 KHNYNO15037 678 aaKnown RBP11.17□□□□□ -0.62
NPHP3-210ENST00000512094 SMTNP53814 917 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 TNP2Q05952 138 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-210ENST00000512094 FAM182BQ5T319 152 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 FCHSD1Q86WN1 690 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 PRM3Q9NNZ6 103 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-210ENST00000512094 KLF15Q9UIH9 416 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
NPHP3-210ENST00000512094 BRPF1P55201 1214 aaPredicted RBP11.16□□□□□ -0.62
NPHP3-210ENST00000512094 IRF5Q13568 498 aa11.16□□□□□ -0.62
NPHP3-210ENST00000512094 NBPF1Q3BBV0 1214 aa11.16□□□□□ -0.62
NPHP3-210ENST00000512094 KRTAP4-8Q9BYQ9 185 aa11.15□□□□□ -0.62
NPHP3-210ENST00000512094 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
NPHP3-210ENST00000512094 VAC14Q08AM6 782 aa11.14□□□□□ -0.63
NPHP3-210ENST00000512094 DOC2BQ14184 412 aa11.14□□□□□ -0.63
NPHP3-210ENST00000512094 SEMA6BQ9H3T3 888 aa11.14□□□□□ -0.63
NPHP3-210ENST00000512094 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
NPHP3-210ENST00000512094 ITGB7P26010 798 aa11.13□□□□□ -0.63
NPHP3-210ENST00000512094 TRIM11Q96F44 468 aa11.13□□□□□ -0.63
NPHP3-210ENST00000512094 FAM157BP0CG42 384 aa11.12□□□□□ -0.63
NPHP3-210ENST00000512094 PCBP4P57723 403 aaKnown RBP11.12□□□□□ -0.63
NPHP3-210ENST00000512094 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
NPHP3-210ENST00000512094 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
NPHP3-210ENST00000512094 PLPP7Q8NBV4 271 aa11.12□□□□□ -0.63
NPHP3-210ENST00000512094 GJA3Q9Y6H8 435 aa11.12□□□□□ -0.63
NPHP3-210ENST00000512094 MAP7D1Q3KQU3 841 aa11.11□□□□□ -0.63
NPHP3-210ENST00000512094 ZDHHC3Q9NYG2 299 aa11.11□□□□□ -0.63
NPHP3-210ENST00000512094 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
NPHP3-210ENST00000512094 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
NPHP3-210ENST00000512094 PLVAPQ9BX97 442 aa11.1□□□□□ -0.63
NPHP3-210ENST00000512094 IQSEC3Q9UPP2 1182 aaPredicted RBP11.1□□□□□ -0.63
NPHP3-210ENST00000512094 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
NPHP3-210ENST00000512094 A6NJY4 79 aa11.09□□□□□ -0.63
NPHP3-210ENST00000512094 TMEM229AB2RXF0 380 aa11.09□□□□□ -0.63
NPHP3-210ENST00000512094 CDK2AP1O14519 115 aa11.09□□□□□ -0.63
NPHP3-210ENST00000512094 SPATA31C1P0DKV0 1188 aa11.09□□□□□ -0.63
NPHP3-210ENST00000512094 GATA4P43694 442 aa11.09□□□□□ -0.63
NPHP3-210ENST00000512094 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
NPHP3-210ENST00000512094 MTFR1Q15390 333 aa11.08□□□□□ -0.64
NPHP3-210ENST00000512094 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
NPHP3-210ENST00000512094 MARK1Q9P0L2 795 aa11.08□□□□□ -0.64
NPHP3-210ENST00000512094 SAMD5Q5TGI4 173 aa11.07□□□□□ -0.64
NPHP3-210ENST00000512094 BICDL1Q6ZP65 573 aa11.07□□□□□ -0.64
NPHP3-210ENST00000512094 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
NPHP3-210ENST00000512094 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
NPHP3-210ENST00000512094 PSMG3-AS1Q96PY0 264 aa11.06□□□□□ -0.64
NPHP3-210ENST00000512094 LAMC2Q13753 1193 aa11.05□□□□□ -0.64
NPHP3-210ENST00000512094 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
NPHP3-210ENST00000512094 PARP3Q9Y6F1 533 aa11.05□□□□□ -0.64
NPHP3-210ENST00000512094 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-210ENST00000512094 ELOA3DA6NLF2 546 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-210ENST00000512094 EFSO43281 561 aa11.04□□□□□ -0.64
NPHP3-210ENST00000512094 ABL2P42684 1182 aa11.04□□□□□ -0.64
NPHP3-210ENST00000512094 ELOA3BQ3SY89 546 aa11.04□□□□□ -0.64
NPHP3-210ENST00000512094 ELOA3Q8NG57 546 aa11.04□□□□□ -0.64
NPHP3-210ENST00000512094 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
NPHP3-210ENST00000512094 ALAS2P22557 587 aa11.03□□□□□ -0.64
NPHP3-210ENST00000512094 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
NPHP3-210ENST00000512094 TXLNAP40222 546 aa11.02□□□□□ -0.65
NPHP3-210ENST00000512094 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
NPHP3-210ENST00000512094 SYT9Q86SS6 491 aa11.02□□□□□ -0.65
NPHP3-210ENST00000512094 PRRT3Q5FWE3 981 aa11.01□□□□□ -0.65
NPHP3-210ENST00000512094 PCDHGA11Q9Y5H2 935 aa11.01□□□□□ -0.65
NPHP3-210ENST00000512094 RSPO4Q2I0M5 234 aaPredicted RBP11□□□□□ -0.65
NPHP3-210ENST00000512094 BACH1O14867 736 aa10.99□□□□□ -0.65
NPHP3-210ENST00000512094 APBA3O96018 575 aa10.99□□□□□ -0.65
NPHP3-210ENST00000512094 SOX11P35716 441 aa10.99□□□□□ -0.65
NPHP3-210ENST00000512094 ZDHHC1Q8WTX9 485 aa10.99□□□□□ -0.65
NPHP3-210ENST00000512094 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
NPHP3-210ENST00000512094 LRRC69Q6ZNQ3 347 aa10.98□□□□□ -0.65
NPHP3-210ENST00000512094 MDFIQ99750 246 aa10.98□□□□□ -0.65
NPHP3-210ENST00000512094 SCHIP1Q9P0W5 487 aaPredicted RBP10.98□□□□□ -0.65
NPHP3-210ENST00000512094 SIN3BO75182 1162 aa10.97□□□□□ -0.65
NPHP3-210ENST00000512094 EML3Q32P44 896 aa10.97□□□□□ -0.65
NPHP3-210ENST00000512094 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
NPHP3-210ENST00000512094 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
NPHP3-210ENST00000512094 SCO2A0A1W2PP80 73 aa10.96□□□□□ -0.65
NPHP3-210ENST00000512094 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
NPHP3-210ENST00000512094 M0R082 166 aa10.96□□□□□ -0.65
NPHP3-210ENST00000512094 NKAPLQ5M9Q1 402 aa10.96□□□□□ -0.65
NPHP3-210ENST00000512094 ZNF417Q8TAU3 575 aa10.96□□□□□ -0.65
NPHP3-210ENST00000512094 ZNF587Q96SQ5 575 aaPredicted RBP10.96□□□□□ -0.65
NPHP3-210ENST00000512094 ZNF358Q9NW07 568 aa10.96□□□□□ -0.65
NPHP3-210ENST00000512094 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
NPHP3-210ENST00000512094 GTF2IP78347 998 aa10.95□□□□□ -0.66
NPHP3-210ENST00000512094 PSME1Q06323 249 aa10.95□□□□□ -0.66
NPHP3-210ENST00000512094 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms