RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
DDX41-213ENST00000512027 CCDC146Q8IYE0 955 aa21.85■■□□□ 1.09
DDX41-213ENST00000512027 FMNL2Q96PY5 1086 aa21.85■■□□□ 1.09
DDX41-213ENST00000512027 MIS18AQ9NYP9 233 aa21.85■■□□□ 1.09
DDX41-213ENST00000512027 KIAA1551Q9HCM1 1747 aa21.84■■□□□ 1.09
DDX41-213ENST00000512027 PRAMEF22A3QJZ6 481 aa21.84■■□□□ 1.09
DDX41-213ENST00000512027 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
DDX41-213ENST00000512027 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.09
DDX41-213ENST00000512027 FKBP8Q14318 412 aa21.83■■□□□ 1.09
DDX41-213ENST00000512027 NLGN1Q8N2Q7 840 aa21.83■■□□□ 1.09
DDX41-213ENST00000512027 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
DDX41-213ENST00000512027 N4BP2Q86UW6 1770 aaPredicted RBP21.82■■□□□ 1.08
DDX41-213ENST00000512027 GPR162Q16538 588 aa21.82■■□□□ 1.08
DDX41-213ENST00000512027 USPL1Q5W0Q7 1092 aa21.82■■□□□ 1.08
DDX41-213ENST00000512027 CD2APQ9Y5K6 639 aa21.82■■□□□ 1.08
DDX41-213ENST00000512027 STARD3NLO95772 234 aa21.81■■□□□ 1.08
DDX41-213ENST00000512027 PNNQ9H307 717 aaKnown RBP21.81■■□□□ 1.08
DDX41-213ENST00000512027 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
DDX41-213ENST00000512027 LAMB4A4D0S4 1761 aa21.8■■□□□ 1.08
DDX41-213ENST00000512027 SCN7AQ01118 1682 aa21.8■■□□□ 1.08
DDX41-213ENST00000512027 PIP4K2AP48426 406 aaPredicted RBP21.8■■□□□ 1.08
DDX41-213ENST00000512027 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
DDX41-213ENST00000512027 TAF7Q15545 349 aaPredicted RBP21.8■■□□□ 1.08
DDX41-213ENST00000512027 ZNF330Q9Y3S2 320 aaPredicted RBP21.8■■□□□ 1.08
DDX41-213ENST00000512027 USP16Q9Y5T5 823 aa21.8■■□□□ 1.08
DDX41-213ENST00000512027 CHD4Q14839 1912 aa21.8■■□□□ 1.08
DDX41-213ENST00000512027 A1BGP04217 495 aa21.79■■□□□ 1.08
DDX41-213ENST00000512027 YBX3P16989 372 aaKnown RBP eCLIP21.79■■□□□ 1.08
DDX41-213ENST00000512027 DDR1Q08345 913 aa21.79■■□□□ 1.08
DDX41-213ENST00000512027 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
DDX41-213ENST00000512027 C10orf71Q711Q0 1435 aa21.79■■□□□ 1.08
DDX41-213ENST00000512027 AFDNP55196 1824 aaKnown RBP21.78■■□□□ 1.08
DDX41-213ENST00000512027 ZPR1O75312 459 aa21.78■■□□□ 1.08
DDX41-213ENST00000512027 YY1P25490 414 aa21.78■■□□□ 1.08
DDX41-213ENST00000512027 RIPK4P57078 832 aa21.78■■□□□ 1.08
DDX41-213ENST00000512027 TMPOP42166 694 aaKnown RBP21.77■■□□□ 1.08
DDX41-213ENST00000512027 EIF5P55010 431 aaKnown RBP21.77■■□□□ 1.08
DDX41-213ENST00000512027 NEUROD2Q15784 382 aa21.77■■□□□ 1.08
DDX41-213ENST00000512027 TEX13AQ9BXU3 409 aaPredicted RBP21.77■■□□□ 1.08
DDX41-213ENST00000512027 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
DDX41-213ENST00000512027 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
DDX41-213ENST00000512027 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
DDX41-213ENST00000512027 CCDC184Q52MB2 194 aa21.76■■□□□ 1.07
DDX41-213ENST00000512027 BCORQ6W2J9 1755 aa21.76■■□□□ 1.07
DDX41-213ENST00000512027 PXDNLA1KZ92 1463 aa21.76■■□□□ 1.07
DDX41-213ENST00000512027 SNRPA1P09661 255 aaKnown RBP21.74■■□□□ 1.07
DDX41-213ENST00000512027 TBC1D2BQ9UPU7 963 aa21.74■■□□□ 1.07
DDX41-213ENST00000512027 POLRMTO00411 1230 aaKnown RBP21.73■■□□□ 1.07
DDX41-213ENST00000512027 RUNDC1Q96C34 613 aa21.73■■□□□ 1.07
DDX41-213ENST00000512027 NRXN2Q9P2S2 1712 aa21.72■■□□□ 1.07
DDX41-213ENST00000512027 TM4SF1P30408 202 aa21.72■■□□□ 1.07
DDX41-213ENST00000512027 IL6STP40189 918 aaPredicted RBP21.72■■□□□ 1.07
DDX41-213ENST00000512027 NFIXQ14938 502 aa21.72■■□□□ 1.07
DDX41-213ENST00000512027 BRCA1P38398 1863 aaKnown RBP21.72■■□□□ 1.07
DDX41-213ENST00000512027 EIF4A1P60842 406 aaKnown RBP21.71■■□□□ 1.07
DDX41-213ENST00000512027 BICDL1Q6ZP65 573 aa21.71■■□□□ 1.07
DDX41-213ENST00000512027 PNISRQ8TF01 805 aaKnown RBP21.71■■□□□ 1.07
DDX41-213ENST00000512027 A0A0G2JLW4 131 aa21.7■■□□□ 1.06
DDX41-213ENST00000512027 NBPF26B4DH59 902 aa21.7■■□□□ 1.06
DDX41-213ENST00000512027 NBPF10Q6P3W6 841 aaKnown RBP21.7■■□□□ 1.06
DDX41-213ENST00000512027 NBPF15Q8N660 670 aa21.7■■□□□ 1.06
DDX41-213ENST00000512027 A0A087WZG4 1122 aa21.69■■□□□ 1.06
DDX41-213ENST00000512027 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
DDX41-213ENST00000512027 TRIM35Q9UPQ4 493 aa21.69■■□□□ 1.06
DDX41-213ENST00000512027 DPEP1P16444 411 aa21.68■■□□□ 1.06
DDX41-213ENST00000512027 TBC1D9BQ66K14 1250 aa21.68■■□□□ 1.06
DDX41-213ENST00000512027 GIGYF1O75420 1035 aaPredicted RBP21.67■■□□□ 1.06
DDX41-213ENST00000512027 CAMTA2O94983 1202 aa21.67■■□□□ 1.06
DDX41-213ENST00000512027 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
DDX41-213ENST00000512027 DZIP3Q86Y13 1208 aaKnown RBP21.67■■□□□ 1.06
DDX41-213ENST00000512027 CARMIL3Q8ND23 1372 aa21.66■■□□□ 1.06
DDX41-213ENST00000512027 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
DDX41-213ENST00000512027 TGFB2P61812 414 aa21.66■■□□□ 1.06
DDX41-213ENST00000512027 ANKRD31Q8N7Z5 1873 aa21.65■■□□□ 1.06
DDX41-213ENST00000512027 SERPINB2P05120 415 aa21.65■■□□□ 1.06
DDX41-213ENST00000512027 NPM2Q86SE8 214 aaKnown RBP21.65■■□□□ 1.06
DDX41-213ENST00000512027 APAF1O14727 1248 aa21.64■■□□□ 1.05
DDX41-213ENST00000512027 GRIN3BO60391 1043 aa21.64■■□□□ 1.05
DDX41-213ENST00000512027 CHRNA5P30532 468 aa21.64■■□□□ 1.05
DDX41-213ENST00000512027 LAS1LQ9Y4W2 734 aaKnown RBP21.64■■□□□ 1.05
DDX41-213ENST00000512027 ANP32CO43423 234 aa21.63■■□□□ 1.05
DDX41-213ENST00000512027 KCNA3P22001 575 aa21.63■■□□□ 1.05
DDX41-213ENST00000512027 CCDC24Q8N4L8 307 aa21.63■■□□□ 1.05
DDX41-213ENST00000512027 NGEFQ8N5V2 710 aa21.63■■□□□ 1.05
DDX41-213ENST00000512027 DLEC1Q9Y238 1755 aa21.62■■□□□ 1.05
DDX41-213ENST00000512027 BCS1LQ9Y276 419 aa21.62■■□□□ 1.05
DDX41-213ENST00000512027 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
DDX41-213ENST00000512027 COL11A2P13942 1736 aaPredicted RBP21.61■■□□□ 1.05
DDX41-213ENST00000512027 KRT24Q2M2I5 525 aa21.61■■□□□ 1.05
DDX41-213ENST00000512027 NUP98P52948 1817 aa21.6■■□□□ 1.05
DDX41-213ENST00000512027 MYL6BP14649 208 aa21.6■■□□□ 1.05
DDX41-213ENST00000512027 MRS2Q9HD23 443 aa21.6■■□□□ 1.05
DDX41-213ENST00000512027 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
DDX41-213ENST00000512027 CHL1O00533 1208 aa21.58■■□□□ 1.05
DDX41-213ENST00000512027 EIF2S2P20042 333 aaKnown RBP21.58■■□□□ 1.05
DDX41-213ENST00000512027 HLFQ16534 295 aa21.58■■□□□ 1.05
DDX41-213ENST00000512027 NECTIN2Q92692 538 aa21.58■■□□□ 1.05
DDX41-213ENST00000512027 ANXA1P04083 346 aa21.57■■□□□ 1.04
DDX41-213ENST00000512027 PRR5LQ6MZQ0 368 aa21.57■■□□□ 1.04
DDX41-213ENST00000512027 TTLL7Q6ZT98 887 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms