RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 CALD1Q05682 793 aaKnown RBP25.58■■□□□ 1.69
SMAD1-211ENST00000512019 HNRNPUQ00839 825 aaKnown RBP eCLIP25.57■■□□□ 1.68
SMAD1-211ENST00000512019 SLC52A2Q9HAB3 445 aa25.57■■□□□ 1.68
SMAD1-211ENST00000512019 SALL2Q9Y467 1007 aaPredicted RBP25.57■■□□□ 1.68
SMAD1-211ENST00000512019 ATP10DQ9P241 1426 aa25.56■■□□□ 1.68
SMAD1-211ENST00000512019 WWC1Q8IX03 1113 aa25.56■■□□□ 1.68
SMAD1-211ENST00000512019 TJP1Q07157 1748 aa25.55■■□□□ 1.68
SMAD1-211ENST00000512019 THUMPD2Q9BTF0 503 aaKnown RBP25.55■■□□□ 1.68
SMAD1-211ENST00000512019 CICQ96RK0 1608 aaPredicted RBP25.55■■□□□ 1.68
SMAD1-211ENST00000512019 SIPA1L3O60292 1781 aaPredicted RBP25.54■■□□□ 1.68
SMAD1-211ENST00000512019 MMP10P09238 476 aa25.53■■□□□ 1.68
SMAD1-211ENST00000512019 RTCBQ9Y3I0 505 aaKnown RBP25.53■■□□□ 1.68
SMAD1-211ENST00000512019 TRAPPC3LQ5T215 181 aa25.52■■□□□ 1.68
SMAD1-211ENST00000512019 NFATC2IPQ8NCF5 419 aa25.52■■□□□ 1.68
SMAD1-211ENST00000512019 ARHGEF1Q92888 912 aaKnown RBP25.51■■□□□ 1.67
SMAD1-211ENST00000512019 CNTNAP4Q9C0A0 1308 aa25.51■■□□□ 1.67
SMAD1-211ENST00000512019 ADCY9O60503 1353 aa25.5■■□□□ 1.67
SMAD1-211ENST00000512019 TAF7Q15545 349 aaPredicted RBP25.5■■□□□ 1.67
SMAD1-211ENST00000512019 RC3H1Q5TC82 1133 aaKnown RBP25.5■■□□□ 1.67
SMAD1-211ENST00000512019 WDR63Q8IWG1 891 aa25.5■■□□□ 1.67
SMAD1-211ENST00000512019 PXDNLA1KZ92 1463 aa25.49■■□□□ 1.67
SMAD1-211ENST00000512019 IL16Q14005 1332 aa25.49■■□□□ 1.67
SMAD1-211ENST00000512019 PTCD1O75127 700 aaKnown RBP25.49■■□□□ 1.67
SMAD1-211ENST00000512019 BRCA1P38398 1863 aaKnown RBP25.49■■□□□ 1.67
SMAD1-211ENST00000512019 ZNF521Q96K83 1311 aa25.48■■□□□ 1.67
SMAD1-211ENST00000512019 RPS6KA4O75676 772 aa25.48■■□□□ 1.67
SMAD1-211ENST00000512019 BTBD11A6QL63 1104 aa25.47■■□□□ 1.67
SMAD1-211ENST00000512019 IFT57Q9NWB7 429 aa25.47■■□□□ 1.67
SMAD1-211ENST00000512019 BABAM1Q9NWV8 329 aa25.47■■□□□ 1.67
SMAD1-211ENST00000512019 ZBED9Q6R2W3 1325 aa25.46■■□□□ 1.67
SMAD1-211ENST00000512019 GYS1P13807 737 aa25.46■■□□□ 1.67
SMAD1-211ENST00000512019 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
SMAD1-211ENST00000512019 ADRA2BP18089 450 aa25.45■■□□□ 1.66
SMAD1-211ENST00000512019 GNAI1P63096 354 aa25.45■■□□□ 1.66
SMAD1-211ENST00000512019 NLGN1Q8N2Q7 840 aa25.45■■□□□ 1.66
SMAD1-211ENST00000512019 ZNF526Q8TF50 670 aaPredicted RBP25.45■■□□□ 1.66
SMAD1-211ENST00000512019 CFAP44Q96MT7 982 aa25.45■■□□□ 1.66
SMAD1-211ENST00000512019 RFC4P35249 363 aa25.44■■□□□ 1.66
SMAD1-211ENST00000512019 TTC5Q8N0Z6 440 aa25.44■■□□□ 1.66
SMAD1-211ENST00000512019 LAS1LQ9Y4W2 734 aaKnown RBP25.44■■□□□ 1.66
SMAD1-211ENST00000512019 KDM3BQ7LBC6 1761 aa25.44■■□□□ 1.66
SMAD1-211ENST00000512019 CRKLP46109 303 aaKnown RBP25.43■■□□□ 1.66
SMAD1-211ENST00000512019 TSPYL4Q9UJ04 414 aa25.43■■□□□ 1.66
SMAD1-211ENST00000512019 A0A0G2JLW4 131 aa25.42■■□□□ 1.66
SMAD1-211ENST00000512019 GOLGA2Q08379 1002 aa25.42■■□□□ 1.66
SMAD1-211ENST00000512019 GPBP1L1Q9HC44 474 aaPredicted RBP25.42■■□□□ 1.66
SMAD1-211ENST00000512019 CHL1O00533 1208 aa25.41■■□□□ 1.66
SMAD1-211ENST00000512019 ZNF853P0CG23 659 aa25.41■■□□□ 1.66
SMAD1-211ENST00000512019 ZNF790Q6PG37 636 aa25.41■■□□□ 1.66
SMAD1-211ENST00000512019 YTHDC1Q96MU7 727 aaKnown RBP25.41■■□□□ 1.66
SMAD1-211ENST00000512019 SRP68Q9UHB9 627 aaKnown RBP25.41■■□□□ 1.66
SMAD1-211ENST00000512019 SLC39A6Q13433 755 aa25.4■■□□□ 1.66
SMAD1-211ENST00000512019 MYH16Q9H6N6 1097 aa25.4■■□□□ 1.66
SMAD1-211ENST00000512019 MIS18AQ9NYP9 233 aa25.4■■□□□ 1.66
SMAD1-211ENST00000512019 UBR2Q8IWV8 1755 aa25.4■■□□□ 1.66
SMAD1-211ENST00000512019 TGFB2P61812 414 aa25.39■■□□□ 1.66
SMAD1-211ENST00000512019 CCDC87Q9NVE4 849 aa25.39■■□□□ 1.66
SMAD1-211ENST00000512019 KCPQ6ZWJ8 1503 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 ARFGEF1Q9Y6D6 1849 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 E9PSI1 815 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 DPEP1P16444 411 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 MBIPQ9NS73 344 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 BCS1LQ9Y276 419 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 PARP3Q9Y6F1 533 aa25.38■■□□□ 1.65
SMAD1-211ENST00000512019 INTS5Q6P9B9 1019 aaKnown RBP25.37■■□□□ 1.65
SMAD1-211ENST00000512019 FKBP8Q14318 412 aa25.36■■□□□ 1.65
SMAD1-211ENST00000512019 DNAJC10Q8IXB1 793 aa25.36■■□□□ 1.65
SMAD1-211ENST00000512019 FMNL2Q96PY5 1086 aa25.36■■□□□ 1.65
SMAD1-211ENST00000512019 USP42Q9H9J4 1324 aaKnown RBP25.36■■□□□ 1.65
SMAD1-211ENST00000512019 AFDNP55196 1824 aaKnown RBP25.35■■□□□ 1.65
SMAD1-211ENST00000512019 FANCIQ9NVI1 1328 aa25.35■■□□□ 1.65
SMAD1-211ENST00000512019 KCNQ3O43525 872 aa25.34■■□□□ 1.65
SMAD1-211ENST00000512019 DDR1Q08345 913 aa25.34■■□□□ 1.65
SMAD1-211ENST00000512019 SLFN5Q08AF3 891 aa25.33■■□□□ 1.65
SMAD1-211ENST00000512019 TSR2Q969E8 191 aaKnown RBP25.33■■□□□ 1.65
SMAD1-211ENST00000512019 ZNF496Q96IT1 587 aaPredicted RBP25.33■■□□□ 1.65
SMAD1-211ENST00000512019 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
SMAD1-211ENST00000512019 KCNA3P22001 575 aa25.32■■□□□ 1.64
SMAD1-211ENST00000512019 EIF4A1P60842 406 aaKnown RBP25.32■■□□□ 1.64
SMAD1-211ENST00000512019 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
SMAD1-211ENST00000512019 VSIG10Q8N0Z9 540 aa25.31■■□□□ 1.64
SMAD1-211ENST00000512019 ARHGAP27Q6ZUM4 889 aa25.3■■□□□ 1.64
SMAD1-211ENST00000512019 CDCA7LQ96GN5 454 aa25.3■■□□□ 1.64
SMAD1-211ENST00000512019 KIF3CO14782 793 aa25.29■■□□□ 1.64
SMAD1-211ENST00000512019 CYP19A1P11511 503 aaPredicted RBP25.29■■□□□ 1.64
SMAD1-211ENST00000512019 USPL1Q5W0Q7 1092 aa25.29■■□□□ 1.64
SMAD1-211ENST00000512019 SOS1Q07889 1333 aaPredicted RBP25.29■■□□□ 1.64
SMAD1-211ENST00000512019 CEP350Q5VT06 3117 aa25.28■■□□□ 1.64
SMAD1-211ENST00000512019 SNRPA1P09661 255 aaKnown RBP25.28■■□□□ 1.64
SMAD1-211ENST00000512019 TM4SF1P30408 202 aa25.27■■□□□ 1.64
SMAD1-211ENST00000512019 NRXN2Q9P2S2 1712 aa25.26■■□□□ 1.63
SMAD1-211ENST00000512019 SBF1O95248 1867 aa25.26■■□□□ 1.63
SMAD1-211ENST00000512019 POLRMTO00411 1230 aaKnown RBP25.26■■□□□ 1.63
SMAD1-211ENST00000512019 TRMT2AQ8IZ69 625 aaKnown RBP25.26■■□□□ 1.63
SMAD1-211ENST00000512019 TEX13AQ9BXU3 409 aaPredicted RBP25.26■■□□□ 1.63
SMAD1-211ENST00000512019 ZBTB1Q9Y2K1 713 aa25.26■■□□□ 1.63
SMAD1-211ENST00000512019 LAMB4A4D0S4 1761 aa25.26■■□□□ 1.63
SMAD1-211ENST00000512019 HOXB7P09629 217 aa25.25■■□□□ 1.63
SMAD1-211ENST00000512019 CHRNA5P30532 468 aa25.25■■□□□ 1.63
SMAD1-211ENST00000512019 DUSP27Q5VZP5 1158 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms