RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-223	ENST00000511898	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	MIS18A	Q9NYP9	233 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	SRP68	Q9UHB9	627 aa	Known RBP	10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	ZBTB1	Q9Y2K1	713 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	CD2AP	Q9Y5K6	639 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	USP16	Q9Y5T5	823 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	TJP1	Q07157	1748 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	UTRN	P46939	3433 aa		10.16	□□□□□ -0.78
BRD8-223	ENST00000511898	USP42	Q9H9J4	1324 aa	Known RBP	10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	PRAMEF22	A3QJZ6	481 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	STARD3NL	O95772	234 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	MMP10	P09238	476 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	ATXN8OS	P0DMR3	200 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	TM4SF1	P30408	202 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	TMPO	P42166	694 aa	Known RBP	10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	FKBP8	Q14318	412 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	CCDC184	Q52MB2	194 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	THUMPD2	Q9BTF0	503 aa	Known RBP	10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	BCL2L12	Q9HB09	334 aa		10.15	□□□□□ -0.78
BRD8-223	ENST00000511898	A1BG	P04217	495 aa		10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	NEFM	P07197	916 aa		10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	RIPK4	P57078	832 aa		10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	NARF	Q9UHQ1	456 aa		10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	GOLGB1	Q14789	3259 aa	Known RBP	10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	SIPA1L3	O60292	1781 aa	Predicted RBP	10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	UBR2	Q8IWV8	1755 aa		10.14	□□□□□ -0.79
BRD8-223	ENST00000511898	SNRPA1	P09661	255 aa	Known RBP	10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	CANX	P27824	592 aa	Known RBP	10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	DDR1	Q08345	913 aa		10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	USPL1	Q5W0Q7	1092 aa		10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	CCDC146	Q8IYE0	955 aa		10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	KLHL34	Q8N239	644 aa		10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	RUNDC1	Q96C34	613 aa		10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	TRIM35	Q9UPQ4	493 aa		10.13	□□□□□ -0.79
BRD8-223	ENST00000511898	MAPK8IP3	Q9UPT6	1336 aa		10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	NBPF26	B4DH59	902 aa		10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	IL6ST	P40189	918 aa	Predicted RBP	10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	EIF4A1	P60842	406 aa	Known RBP	10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	NBPF10	Q6P3W6	841 aa	Known RBP	10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	NBPF15	Q8N660	670 aa		10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	PNISR	Q8TF01	805 aa	Known RBP	10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	RRP7A	Q9Y3A4	280 aa	Known RBP	10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	VIRMA	Q69YN4	1812 aa	Known RBP	10.12	□□□□□ -0.79
BRD8-223	ENST00000511898	DCAF8L1	A6NGE4	600 aa		10.11	□□□□□ -0.79
BRD8-223	ENST00000511898	POLRMT	O00411	1230 aa	Known RBP	10.11	□□□□□ -0.79
BRD8-223	ENST00000511898	ZPR1	O75312	459 aa		10.11	□□□□□ -0.79
BRD8-223	ENST00000511898	GIGYF1	O75420	1035 aa	Predicted RBP	10.11	□□□□□ -0.79
BRD8-223	ENST00000511898	YBX3	P16989	372 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
BRD8-223	ENST00000511898	WDR43	Q15061	677 aa	Known RBP eCLIP	10.11	□□□□□ -0.79	6e-7	■■□□□ 12.2
BRD8-223	ENST00000511898	COL15A1	P39059	1388 aa		10.11	□□□□□ -0.79
BRD8-223	ENST00000511898	KCNA3	P22001	575 aa		10.1	□□□□□ -0.79
BRD8-223	ENST00000511898	PIP4K2A	P48426	406 aa	Predicted RBP	10.1	□□□□□ -0.79
BRD8-223	ENST00000511898	NFIX	Q14938	502 aa		10.1	□□□□□ -0.79
BRD8-223	ENST00000511898	GPR162	Q16538	588 aa		10.1	□□□□□ -0.79
BRD8-223	ENST00000511898	BABAM1	Q9NWV8	329 aa		10.1	□□□□□ -0.79
BRD8-223	ENST00000511898	TBC1D2B	Q9UPU7	963 aa		10.1	□□□□□ -0.79
BRD8-223	ENST00000511898	PARP3	Q9Y6F1	533 aa		10.1	□□□□□ -0.79
BRD8-223	ENST00000511898		A0A087WZG4	1122 aa		10.09	□□□□□ -0.79
BRD8-223	ENST00000511898	CHL1	O00533	1208 aa		10.09	□□□□□ -0.79
BRD8-223	ENST00000511898	CAMTA2	O94983	1202 aa		10.09	□□□□□ -0.79
BRD8-223	ENST00000511898	TGFB2	P61812	414 aa		10.09	□□□□□ -0.79
BRD8-223	ENST00000511898	NEUROD2	Q15784	382 aa		10.09	□□□□□ -0.79
BRD8-223	ENST00000511898		A0A0G2JLW4	131 aa		10.08	□□□□□ -0.8
BRD8-223	ENST00000511898	APAF1	O14727	1248 aa		10.08	□□□□□ -0.8
BRD8-223	ENST00000511898	LMOD3	Q0VAK6	560 aa		10.08	□□□□□ -0.8
BRD8-223	ENST00000511898	C10orf71	Q711Q0	1435 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	C4A	P0C0L4	1744 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	DLG5	Q8TDM6	1919 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	GRIN3B	O60391	1043 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	SERPINB2	P05120	415 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	DPEP1	P16444	411 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	YY1	P25490	414 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	TBC1D9B	Q66K14	1250 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	LRP10	Q7Z4F1	713 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	TSPYL4	Q9UJ04	414 aa		10.07	□□□□□ -0.8
BRD8-223	ENST00000511898	PXDNL	A1KZ92	1463 aa		10.06	□□□□□ -0.8
BRD8-223	ENST00000511898	ANP32C	O43423	234 aa		10.06	□□□□□ -0.8
BRD8-223	ENST00000511898	ZNF853	P0CG23	659 aa		10.06	□□□□□ -0.8
BRD8-223	ENST00000511898	PDIA6	Q15084	440 aa		10.06	□□□□□ -0.8
BRD8-223	ENST00000511898	DZIP3	Q86Y13	1208 aa	Known RBP	10.06	□□□□□ -0.8
BRD8-223	ENST00000511898	PELP1	Q8IZL8	1130 aa	Known RBP	10.06	□□□□□ -0.8
BRD8-223	ENST00000511898	RGL2	O15211	777 aa		10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	KRT24	Q2M2I5	525 aa		10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	CLEC4G	Q6UXB4	293 aa		10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	BICDL1	Q6ZP65	573 aa		10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	CFAP44	Q96MT7	982 aa		10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	WWC3	Q9ULE0	1092 aa		10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.05	□□□□□ -0.8
BRD8-223	ENST00000511898	CHRNA5	P30532	468 aa		10.04	□□□□□ -0.8
BRD8-223	ENST00000511898	HLF	Q16534	295 aa		10.04	□□□□□ -0.8
BRD8-223	ENST00000511898	KDM3B	Q7LBC6	1761 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	KIF13B	Q9NQT8	1826 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	PRR5L	Q6MZQ0	368 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	TTLL7	Q6ZT98	887 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	SETDB2	Q96T68	719 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	KIAA1551	Q9HCM1	1747 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	MRS2	Q9HD23	443 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	ERBB4	Q15303	1308 aa		10.03	□□□□□ -0.8
BRD8-223	ENST00000511898	ERVV-1	B6SEH8	477 aa		10.02	□□□□□ -0.81
BRD8-223	ENST00000511898	EIF2S2	P20042	333 aa	Known RBP	10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms