RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 BICD2Q8TD16 824 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 ARXQ96QS3 562 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 FAM107BQ9H098 131 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 GNAT3A8MTJ3 354 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 GLRX3O76003 335 aaKnown RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 TMOD2Q9NZR1 351 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 PCP11498 1178 aaKnown RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 SSFA2P28290 1259 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 GNAQP50148 359 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 NFE2L2Q16236 605 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 TTC12Q9H892 705 aaPredicted RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 KINO60870 393 aaKnown RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 LDHCP07864 332 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 EPS15P42566 896 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 CHD2O14647 1828 aaKnown RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 NF2P35240 595 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 MMP14P50281 582 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 FERMT1Q9BQL6 677 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 NALCNQ8IZF0 1738 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 KIDINS220Q9ULH0 1771 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 CNGA1P29973 690 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 SASS6Q6UVJ0 657 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 IQSEC3Q9UPP2 1182 aaPredicted RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 ZNF713Q8N859 430 aaPredicted RBP5.82□□□□□ -1.48
PTPN13-209ENST00000511467 KIF1BPQ96EK5 621 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 PLVAPQ9BX97 442 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 SMTNL1A8MU46 457 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 VPS36Q86VN1 386 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 KIF13AQ9H1H9 1805 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 KIF5BP33176 963 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 GBP3Q9H0R5 595 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 C14orf93Q9H972 538 aaKnown RBP5.81□□□□□ -1.48
PTPN13-209ENST00000511467 FLAD1Q8NFF5 587 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 SIN3AQ96ST3 1273 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 TRAK1Q9UPV9 953 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 ZNF189O75820 626 aaPredicted RBP5.81□□□□□ -1.48
PTPN13-209ENST00000511467 FAM177A1Q8N128 213 aaPredicted RBP5.81□□□□□ -1.48
PTPN13-209ENST00000511467 EHBP1Q8NDI1 1231 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 FLT4P35916 1363 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 GOLIM4O00461 696 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 RIC3Q7Z5B4 369 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 SMC3Q9UQE7 1217 aa5.81□□□□□ -1.48
PTPN13-209ENST00000511467 AXDND1Q5T1B0 1012 aaPredicted RBP5.81□□□□□ -1.48
PTPN13-209ENST00000511467 TNPO1Q92973 898 aaKnown RBP5.81□□□□□ -1.48
PTPN13-209ENST00000511467 CETN1Q12798 172 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 CCAR1Q8IX12 1150 aaKnown RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 NCOA3Q9Y6Q9 1424 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 MYH7BA7E2Y1 1941 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 TMC4Q7Z404 712 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC39Q9UFE4 941 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 RNF123Q5XPI4 1314 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 PTCH1Q13635 1447 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 SEMA3FQ13275 785 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 FKBP5Q13451 457 aaPredicted RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 WASHC4Q2M389 1173 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 ODF2Q5BJF6 829 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 SCAND2PQ9GZW5 306 aaPredicted RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 CNNM2Q9H8M5 875 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 TMOD4Q9NZQ9 345 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 CHMP3Q9Y3E7 222 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 PPRC1Q5VV67 1664 aaKnown RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 ARHGEF28Q8N1W1 1705 aaKnown RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 WDR78Q5VTH9 848 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC112Q8NEF3 446 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 CGNQ9P2M7 1197 aaKnown RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 GOLGA6L7A0A1B0GV03 622 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 TOM1O60784 492 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 IMMTQ16891 758 aaKnown RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 PARD3Q8TEW0 1356 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 POTEB2H3BUK9 544 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 PRPHP41219 470 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 MLECQ14165 292 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 DBF4Q9UBU7 674 aaPredicted RBP5.8□□□□□ -1.48
PTPN13-209ENST00000511467 PZPP20742 1482 aa5.8□□□□□ -1.48
PTPN13-209ENST00000511467 ZBTB7CA1YPR0 619 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 MAP9Q49MG5 647 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 ZNF397Q8NF99 534 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 BAG3O95817 575 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 IGHMBP2P38935 993 aaKnown RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 AMPD3Q01432 767 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 DUSP27Q5VZP5 1158 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 FAM114A1Q8IWE2 563 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC150Q8NCX0 1101 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 LTN1O94822 1766 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 IFI16Q16666 785 aaKnown RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 HSP90B2PQ58FF3 399 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 PROSER2Q86WR7 435 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 ORC3Q9UBD5 711 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 MAST3O60307 1309 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 NLRP6P59044 892 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 TAF7Q15545 349 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 TBX22Q9Y458 520 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 ABCC3O15438 1527 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 MRE11P49959 708 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 PPP4R3AQ6IN85 833 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 ZSCAN16Q9H4T2 348 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 VIMP08670 466 aaKnown RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 USP8P40818 1118 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms