RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 AIDAQ96BJ3 306 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 ABHD17AQ96GS6 310 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 DCAF5Q96JK2 942 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 SLC4A9Q96Q91 983 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 ZMYND15Q9H091 742 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 NDFIP2Q9NV92 336 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 NOD1Q9Y239 953 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 COG6Q9Y2V7 657 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 PCDHGC4Q9Y5F7 938 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 MYO15BQ96JP2 1530 aa7.11□□□□□ -1.27
TOPBP1-208ENST00000511439 A6NJY4 79 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 RAD21O60216 631 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 BNIP3LO60238 219 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 TATP17735 454 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 MTFR1Q15390 333 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 SLCO4C1Q6ZQN7 724 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 EDARADDQ8WWZ3 215 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 ZDHHC3Q9NYG2 299 aa7.1□□□□□ -1.27
TOPBP1-208ENST00000511439 A6NJR5 290 aa7.09□□□□□ -1.27
TOPBP1-208ENST00000511439 MSTNO14793 375 aa7.09□□□□□ -1.27
TOPBP1-208ENST00000511439 POM121Q96HA1 1249 aa7.09□□□□□ -1.27
TOPBP1-208ENST00000511439 ZCCHC2Q9C0B9 1178 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-208ENST00000511439 SERTAD1Q9UHV2 236 aa7.09□□□□□ -1.27
TOPBP1-208ENST00000511439 TMEM229AB2RXF0 380 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 ATXN7O15265 892 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 ARAFP10398 606 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 SKIP12755 728 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 ATP4AP20648 1035 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 AMPD1P23109 780 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 PLA2G4EQ3MJ16 856 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 ARSJQ5FYB0 599 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 THOC2Q8NI27 1593 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-208ENST00000511439 SHISA8B8ZZ34 492 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 FAM182BQ5T319 152 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 ALG2Q9H553 416 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 AVENQ9NQS1 362 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 DNAAF2Q9NVR5 837 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 CABP1Q9NZU7 370 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 GGA1Q9UJY5 639 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 PCDHGA11Q9Y5H2 935 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 GJA3Q9Y6H8 435 aa7.07□□□□□ -1.28
TOPBP1-208ENST00000511439 A0A1W2PNR3 127 aa7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 C2CD2LO14523 706 aa7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 GTF2IP78347 998 aa7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 CTBSQ01459 385 aa7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 PSME1Q06323 249 aa7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 IQSEC3Q9UPP2 1182 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-208ENST00000511439 PIK3CDO00329 1044 aa7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 EPXP11678 715 aa7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 ADH6P28332 368 aa7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 SNRPNP63162 240 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 C1orf229Q6ZS94 237 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 TRIM50Q86XT4 487 aa7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 ZNF295-AS1Q8N0V1 137 aa7.05□□□□□ -1.28
TOPBP1-208ENST00000511439 BAZ1AQ9NRL2 1556 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 MAPTP10636 758 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 TNP2Q05952 138 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 LAMC2Q13753 1193 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 NCOA4Q13772 614 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 BICDL1Q6ZP65 573 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 SPOCK3Q9BQ16 436 aa7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 SCHIP1Q9P0W5 487 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-208ENST00000511439 RIMBP3CA6NJZ7 1639 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 RIMBP3BA6NNM3 1639 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 RIMBP3Q9UFD9 1639 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 DCDC2BA2VCK2 349 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 USP17L5A8MUK1 530 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 GNB5O14775 395 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 ATP1A2P50993 1020 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 ZIC5Q96T25 663 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 ZNF358Q9NW07 568 aa7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-208ENST00000511439 NEURL1BA8MQ27 555 aa7.02□□□□□ -1.29
TOPBP1-208ENST00000511439 TEAD4Q15561 434 aa7.02□□□□□ -1.29
TOPBP1-208ENST00000511439 BTBD6Q96KE9 485 aa7.02□□□□□ -1.29
TOPBP1-208ENST00000511439 PRR12Q9ULL5 1215 aa7.02□□□□□ -1.29
TOPBP1-208ENST00000511439 PLEKHM2Q8IWE5 1019 aa7.01□□□□□ -1.29
TOPBP1-208ENST00000511439 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
TOPBP1-208ENST00000511439 NEUROD4Q9HD90 331 aa7.01□□□□□ -1.29
TOPBP1-208ENST00000511439 MARK1Q9P0L2 795 aa7.01□□□□□ -1.29
TOPBP1-208ENST00000511439 CHMP3Q9Y3E7 222 aa7.01□□□□□ -1.29
TOPBP1-208ENST00000511439 PROCP04070 461 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 CD33P20138 364 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 NOS2P35228 1153 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 DGKGP49619 791 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 GRIN2CQ14957 1233 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 ZNF468Q5VIY5 522 aaPredicted RBP7□□□□□ -1.29
TOPBP1-208ENST00000511439 LINC00114Q6XXX2 140 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 L3MBTL2Q969R5 705 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 USP3Q9Y6I4 520 aa7□□□□□ -1.29
TOPBP1-208ENST00000511439 ITGB2P05107 769 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms