RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 EML1O00423 815 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 TLR1Q15399 786 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 BRPF3Q9ULD4 1205 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 LRFN2Q9ULH4 789 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 CHMP3Q9Y3E7 222 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 USP3Q9Y6I4 520 aa8.86□□□□□ -0.99
HMGB1P47-201ENST00000511281 RECKO95980 971 aa8.85□□□□□ -0.99
HMGB1P47-201ENST00000511281 P4HBP07237 508 aaKnown RBP8.85□□□□□ -0.99
HMGB1P47-201ENST00000511281 SLC19A1P41440 591 aa8.85□□□□□ -0.99
HMGB1P47-201ENST00000511281 FGD1P98174 961 aa8.85□□□□□ -0.99
HMGB1P47-201ENST00000511281 TAGLNQ01995 201 aaKnown RBP8.85□□□□□ -0.99
HMGB1P47-201ENST00000511281 RAB6BQ9NRW1 208 aa8.85□□□□□ -0.99
HMGB1P47-201ENST00000511281 MRPL58Q14197 206 aaKnown RBP8.84□□□□□ -0.99
HMGB1P47-201ENST00000511281 TBCELQ5QJ74 424 aa8.84□□□□□ -0.99
HMGB1P47-201ENST00000511281 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
HMGB1P47-201ENST00000511281 ZDHHC1Q8WTX9 485 aa8.84□□□□□ -0.99
HMGB1P47-201ENST00000511281 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
HMGB1P47-201ENST00000511281 SERTM1A2A2V5 107 aa8.83□□□□□ -1
HMGB1P47-201ENST00000511281 BRD2P25440 801 aaKnown RBP8.83□□□□□ -1
HMGB1P47-201ENST00000511281 PTGIRP43119 386 aa8.83□□□□□ -1
HMGB1P47-201ENST00000511281 PDE3BQ13370 1112 aa8.83□□□□□ -1
HMGB1P47-201ENST00000511281 NNTQ13423 1086 aa8.83□□□□□ -1
HMGB1P47-201ENST00000511281 RTN1Q16799 776 aa8.83□□□□□ -1
HMGB1P47-201ENST00000511281 PPARGC1BQ86YN6 1023 aaKnown RBP8.83□□□□□ -1
HMGB1P47-201ENST00000511281 PRKD2Q9BZL6 878 aa8.83□□□□□ -1
HMGB1P47-201ENST00000511281 NOS2P35228 1153 aa8.82□□□□□ -1
HMGB1P47-201ENST00000511281 CENPCQ03188 943 aa8.82□□□□□ -1
HMGB1P47-201ENST00000511281 CCDC87Q9NVE4 849 aa8.82□□□□□ -1
HMGB1P47-201ENST00000511281 C1orf53Q5VUE5 145 aa8.81□□□□□ -1
HMGB1P47-201ENST00000511281 ZNF598Q86UK7 904 aaKnown RBP8.81□□□□□ -1
HMGB1P47-201ENST00000511281 SPNS2Q8IVW8 549 aa8.81□□□□□ -1
HMGB1P47-201ENST00000511281 GJD3Q8N144 294 aa8.81□□□□□ -1
HMGB1P47-201ENST00000511281 C8orf37Q96NL8 207 aa8.81□□□□□ -1
HMGB1P47-201ENST00000511281 PKD2L1Q9P0L9 805 aa8.81□□□□□ -1
HMGB1P47-201ENST00000511281 ALDH1A1P00352 501 aa8.8□□□□□ -1
HMGB1P47-201ENST00000511281 EHHADHQ08426 723 aa8.8□□□□□ -1
HMGB1P47-201ENST00000511281 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
HMGB1P47-201ENST00000511281 FAM26DQ5JW98 314 aa8.8□□□□□ -1
HMGB1P47-201ENST00000511281 ALDH16A1Q8IZ83 802 aa8.8□□□□□ -1
HMGB1P47-201ENST00000511281 SNIP1Q8TAD8 396 aaKnown RBP8.8□□□□□ -1
HMGB1P47-201ENST00000511281 ZBTB39O15060 712 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 GPR182O15218 404 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
HMGB1P47-201ENST00000511281 MZF1P28698 734 aaPredicted RBP8.79□□□□□ -1
HMGB1P47-201ENST00000511281 GPC1P35052 558 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 USP5P45974 858 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 PLCB3Q01970 1234 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 CBLBQ13191 982 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 L3MBTL2Q969R5 705 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 ITPKCQ96DU7 683 aa8.79□□□□□ -1
HMGB1P47-201ENST00000511281 ITGAEP38570 1179 aa8.78□□□□□ -1
HMGB1P47-201ENST00000511281 SH3PXD2AQ5TCZ1 1133 aa8.78□□□□□ -1
HMGB1P47-201ENST00000511281 ZNF697Q5TEC3 545 aa8.78□□□□□ -1
HMGB1P47-201ENST00000511281 WASF2Q9Y6W5 498 aa8.78□□□□□ -1
HMGB1P47-201ENST00000511281 TIMP2P16035 220 aa8.77□□□□□ -1.01
HMGB1P47-201ENST00000511281 ETFBKMTQ8IXQ9 262 aa8.77□□□□□ -1.01
HMGB1P47-201ENST00000511281 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
HMGB1P47-201ENST00000511281 ZIC2O95409 532 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 LDLRAD1Q5T700 205 aa8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 TMC4Q7Z404 712 aa8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 RHBDD1Q8TEB9 315 aa8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 NLRP3Q96P20 1036 aa8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 ZSCAN10Q96SZ4 725 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 GRIP2Q9C0E4 1043 aa8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 V9GY48 417 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P47-201ENST00000511281 DGKZQ13574 1117 aa8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 ENOX2Q16206 610 aaKnown RBP8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 C7orf43Q8WVR3 580 aa8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 IFT43Q96FT9 208 aa8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 PHACTR1Q9C0D0 580 aa8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 ZNF232Q9UNY5 417 aa8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 GPC6Q9Y625 555 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P47-201ENST00000511281 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 SCAMP3O14828 347 aaKnown RBP8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 PDGFAP04085 211 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 ZAP70P43403 619 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 DAB2P98082 770 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 AAMPQ13685 434 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 ATCAYQ86WG3 371 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 BACH2Q9BYV9 841 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 POLIQ9UNA4 740 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 HCN4Q9Y3Q4 1203 aa8.74□□□□□ -1.01
HMGB1P47-201ENST00000511281 MEN1O00255 615 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 GDF9O60383 454 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 RNF144AP50876 292 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 WDR4P57081 412 aaKnown RBP8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 HIF1AQ16665 826 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 FBF1Q8TES7 1133 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 AGBL1Q96MI9 1066 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms