RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 XAGE2Q96GT9 111 aa8□□□□□ -1.13
HMGB3P13-201ENST00000511263 OXCT2Q9BYC2 517 aaPredicted RBP8□□□□□ -1.13
HMGB3P13-201ENST00000511263 INHAP05111 366 aa7.99□□□□□ -1.13
HMGB3P13-201ENST00000511263 RFX1P22670 979 aa7.99□□□□□ -1.13
HMGB3P13-201ENST00000511263 ZSCAN10Q96SZ4 725 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P13-201ENST00000511263 TIMELESSQ9UNS1 1208 aa7.99□□□□□ -1.13
HMGB3P13-201ENST00000511263 KRBA1A5PL33 1030 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 CENPCQ03188 943 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 TLR1Q15399 786 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 GALNT6Q8NCL4 622 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 LRRC4BQ9NT99 713 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 NSFL1CQ9UNZ2 370 aaKnown RBP7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 CHMP3Q9Y3E7 222 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 PCDHGA11Q9Y5H2 935 aa7.98□□□□□ -1.13
HMGB3P13-201ENST00000511263 ARID3CA6NKF2 412 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 M0R2N6 131 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 PPP1R15AO75807 674 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 UBAP2LQ14157 1087 aaKnown RBP7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 CCDC102BQ68D86 513 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 TPCN2Q8NHX9 752 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 KLRG1Q96E93 195 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 ETNK1Q9HBU6 452 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 HRH3Q9Y5N1 445 aa7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 ACIN1Q9UKV3 1341 aaKnown RBP7.97□□□□□ -1.13
HMGB3P13-201ENST00000511263 COL8A1P27658 744 aa7.96□□□□□ -1.14
HMGB3P13-201ENST00000511263 MAP2K3P46734 347 aa7.96□□□□□ -1.14
HMGB3P13-201ENST00000511263 SEC13P55735 322 aa7.96□□□□□ -1.14
HMGB3P13-201ENST00000511263 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.14
HMGB3P13-201ENST00000511263 SIX5Q8N196 739 aa7.96□□□□□ -1.14
HMGB3P13-201ENST00000511263 STAU1O95793 577 aaKnown RBP7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 SMTNP53814 917 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 CCDC82Q8N4S0 544 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 RHBDD1Q8TEB9 315 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 PBXIP1Q96AQ6 731 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 CFHR5Q9BXR6 569 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 RUBCNLQ9H714 662 aa7.95□□□□□ -1.14
HMGB3P13-201ENST00000511263 C2CD2LO14523 706 aa7.94□□□□□ -1.14
HMGB3P13-201ENST00000511263 SCNN1DP51172 638 aa7.94□□□□□ -1.14
HMGB3P13-201ENST00000511263 C4orf17Q53FE4 359 aa7.94□□□□□ -1.14
HMGB3P13-201ENST00000511263 ZNF594Q96JF6 807 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P13-201ENST00000511263 NIFKQ9BYG3 293 aaKnown RBP7.94□□□□□ -1.14
HMGB3P13-201ENST00000511263 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P13-201ENST00000511263 A6NJY4 79 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L15C9J2P7 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L10C9JJH3 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L13C9JLJ4 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L12C9JPN9 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L11C9JVI0 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L21D6R901 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L18D6R9N7 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L22D6RA61 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L17D6RBQ6 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L19D6RCP7 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L20D6RJB6 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 CDK2AP1O14519 115 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 HOXB4P17483 251 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 USP17L24Q0WX57 530 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 KANK4Q5T7N3 995 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 PPARGC1BQ86YN6 1023 aaKnown RBP7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 ANKMY2Q8IV38 441 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 SERTAD1Q9UHV2 236 aa7.93□□□□□ -1.14
HMGB3P13-201ENST00000511263 A0A1B0GTH6 734 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 TMEM229AB2RXF0 380 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 BAG6P46379 1132 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 CLDN10P78369 228 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 GAS2L2Q8NHY3 880 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 ABHD17AQ96GS6 310 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 SUV39H2Q9H5I1 410 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 RRAGCQ9HB90 399 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 ZNF358Q9NW07 568 aa7.92□□□□□ -1.14
HMGB3P13-201ENST00000511263 K7ELQ4 463 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 ZBTB7BO15156 539 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 MSX1P28360 303 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 PDE4CQ08493 712 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 PTK7Q13308 1070 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 ELOAQ14241 798 aaKnown RBP7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 MTFR1Q15390 333 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 NBPF1Q3BBV0 1214 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 C1orf216Q8TAB5 229 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 MKL2Q9ULH7 1088 aa7.91□□□□□ -1.14
HMGB3P13-201ENST00000511263 SUPT5HO00267 1087 aaKnown RBP7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 ATG7O95352 703 aa7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 FURINP09958 794 aa7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 CTBSQ01459 385 aa7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 HINFPQ9BQA5 517 aa7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
HMGB3P13-201ENST00000511263 BNIP3LO60238 219 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 DPYDQ12882 1025 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 CRTC2Q53ET0 693 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 LINC00114Q6XXX2 140 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 PGBD3Q8N328 593 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms