RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
SH3TC1-220ENST00000511002 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
SH3TC1-220ENST00000511002 BTBD11A6QL63 1104 aa20.47■□□□□ 0.87
SH3TC1-220ENST00000511002 MMP10P09238 476 aa20.47■□□□□ 0.87
SH3TC1-220ENST00000511002 RFC4P35249 363 aa20.47■□□□□ 0.87
SH3TC1-220ENST00000511002 TMPOP42166 694 aaKnown RBP20.47■□□□□ 0.87
SH3TC1-220ENST00000511002 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
SH3TC1-220ENST00000511002 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
SH3TC1-220ENST00000511002 APAF1O14727 1248 aa20.46■□□□□ 0.87
SH3TC1-220ENST00000511002 THUMPD2Q9BTF0 503 aaKnown RBP20.46■□□□□ 0.87
SH3TC1-220ENST00000511002 USP42Q9H9J4 1324 aaKnown RBP20.46■□□□□ 0.87
SH3TC1-220ENST00000511002 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
SH3TC1-220ENST00000511002 PRAMEF22A3QJZ6 481 aa20.44■□□□□ 0.86
SH3TC1-220ENST00000511002 RIPK4P57078 832 aa20.44■□□□□ 0.86
SH3TC1-220ENST00000511002 FKBP8Q14318 412 aa20.44■□□□□ 0.86
SH3TC1-220ENST00000511002 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
SH3TC1-220ENST00000511002 MIS18AQ9NYP9 233 aa20.44■□□□□ 0.86
SH3TC1-220ENST00000511002 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
SH3TC1-220ENST00000511002 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
SH3TC1-220ENST00000511002 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
SH3TC1-220ENST00000511002 COL15A1P39059 1388 aa20.43■□□□□ 0.86
SH3TC1-220ENST00000511002 DCAF8L1A6NGE4 600 aa20.42■□□□□ 0.86
SH3TC1-220ENST00000511002 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
SH3TC1-220ENST00000511002 NLGN1Q8N2Q7 840 aa20.42■□□□□ 0.86
SH3TC1-220ENST00000511002 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 KIF13BQ9NQT8 1826 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 A1BGP04217 495 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.864e-6■■■□□ 14.8
SH3TC1-220ENST00000511002 USPL1Q5W0Q7 1092 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 WWC3Q9ULE0 1092 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 USP16Q9Y5T5 823 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
SH3TC1-220ENST00000511002 PIP4K2AP48426 406 aaPredicted RBP20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 DDR1Q08345 913 aa20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 GPR162Q16538 588 aa20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 TRIM35Q9UPQ4 493 aa20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 UTRNP46939 3433 aa20.4■□□□□ 0.86
SH3TC1-220ENST00000511002 STARD3NLO95772 234 aa20.39■□□□□ 0.85
SH3TC1-220ENST00000511002 C10orf71Q711Q0 1435 aa20.38■□□□□ 0.85
SH3TC1-220ENST00000511002 YY1P25490 414 aa20.38■□□□□ 0.85
SH3TC1-220ENST00000511002 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
SH3TC1-220ENST00000511002 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
SH3TC1-220ENST00000511002 N4BP2Q86UW6 1770 aaPredicted RBP20.38■□□□□ 0.85
SH3TC1-220ENST00000511002 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
SH3TC1-220ENST00000511002 CHD4Q14839 1912 aa20.37■□□□□ 0.85
SH3TC1-220ENST00000511002 GOLGB1Q14789 3259 aaKnown RBP20.36■□□□□ 0.85
SH3TC1-220ENST00000511002 ZPR1O75312 459 aa20.36■□□□□ 0.85
SH3TC1-220ENST00000511002 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
SH3TC1-220ENST00000511002 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
SH3TC1-220ENST00000511002 PXDNLA1KZ92 1463 aa20.36■□□□□ 0.85
SH3TC1-220ENST00000511002 AFDNP55196 1824 aaKnown RBP20.35■□□□□ 0.85
SH3TC1-220ENST00000511002 SNRPA1P09661 255 aaKnown RBP20.35■□□□□ 0.85
SH3TC1-220ENST00000511002 TM4SF1P30408 202 aa20.35■□□□□ 0.85
SH3TC1-220ENST00000511002 PARP3Q9Y6F1 533 aa20.35■□□□□ 0.85
SH3TC1-220ENST00000511002 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
SH3TC1-220ENST00000511002 POLRMTO00411 1230 aaKnown RBP20.34■□□□□ 0.85
SH3TC1-220ENST00000511002 NFIXQ14938 502 aa20.34■□□□□ 0.85
SH3TC1-220ENST00000511002 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
SH3TC1-220ENST00000511002 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
SH3TC1-220ENST00000511002 LAMB4A4D0S4 1761 aa20.34■□□□□ 0.85
SH3TC1-220ENST00000511002 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
SH3TC1-220ENST00000511002 IL6STP40189 918 aaPredicted RBP20.32■□□□□ 0.84
SH3TC1-220ENST00000511002 EIF4A1P60842 406 aaKnown RBP20.32■□□□□ 0.84
SH3TC1-220ENST00000511002 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
SH3TC1-220ENST00000511002 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
SH3TC1-220ENST00000511002 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
SH3TC1-220ENST00000511002 NRXN2Q9P2S2 1712 aa20.31■□□□□ 0.84
SH3TC1-220ENST00000511002 A0A0G2JLW4 131 aa20.31■□□□□ 0.84
SH3TC1-220ENST00000511002 CCDC27Q2M243 656 aa20.3■□□□□ 0.84
SH3TC1-220ENST00000511002 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
SH3TC1-220ENST00000511002 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
SH3TC1-220ENST00000511002 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
SH3TC1-220ENST00000511002 A0A087WZG4 1122 aa20.29■□□□□ 0.84
SH3TC1-220ENST00000511002 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
SH3TC1-220ENST00000511002 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
SH3TC1-220ENST00000511002 DPEP1P16444 411 aa20.29■□□□□ 0.84
SH3TC1-220ENST00000511002 TBC1D9BQ66K14 1250 aa20.29■□□□□ 0.84
SH3TC1-220ENST00000511002 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
SH3TC1-220ENST00000511002 CARMIL3Q8ND23 1372 aa20.27■□□□□ 0.84
SH3TC1-220ENST00000511002 KCNA3P22001 575 aa20.27■□□□□ 0.84
SH3TC1-220ENST00000511002 TGFB2P61812 414 aa20.27■□□□□ 0.84
SH3TC1-220ENST00000511002 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
SH3TC1-220ENST00000511002 TSPYL4Q9UJ04 414 aa20.27■□□□□ 0.84
SH3TC1-220ENST00000511002 SERPINB2P05120 415 aa20.26■□□□□ 0.83
SH3TC1-220ENST00000511002 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
SH3TC1-220ENST00000511002 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
SH3TC1-220ENST00000511002 CHRNA5P30532 468 aa20.25■□□□□ 0.83
SH3TC1-220ENST00000511002 KRT24Q2M2I5 525 aa20.24■□□□□ 0.83
SH3TC1-220ENST00000511002 CCDC24Q8N4L8 307 aa20.24■□□□□ 0.83
SH3TC1-220ENST00000511002 NGEFQ8N5V2 710 aa20.24■□□□□ 0.83
SH3TC1-220ENST00000511002 ANKRD31Q8N7Z5 1873 aa20.24■□□□□ 0.83
SH3TC1-220ENST00000511002 ZNF521Q96K83 1311 aa20.24■□□□□ 0.83
SH3TC1-220ENST00000511002 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-220ENST00000511002 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
SH3TC1-220ENST00000511002 CHL1O00533 1208 aa20.22■□□□□ 0.83
SH3TC1-220ENST00000511002 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
SH3TC1-220ENST00000511002 ZNF784Q8NCA9 323 aaPredicted RBP20.22■□□□□ 0.83
SH3TC1-220ENST00000511002 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms