RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 MORC1Q86VD1 984 aa9.34□□□□□ -0.91
CAST-232ENST00000510500 STAG1Q8WVM7 1258 aa9.34□□□□□ -0.91
CAST-232ENST00000510500 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
CAST-232ENST00000510500 THRAP3Q9Y2W1 955 aaKnown RBP9.34□□□□□ -0.91
CAST-232ENST00000510500 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
CAST-232ENST00000510500 POM121CA8CG34 1229 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 POU5F1BQ06416 359 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 UBE4AQ14139 1066 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 BMS1Q14692 1282 aaKnown RBP9.33□□□□□ -0.92
CAST-232ENST00000510500 ZNF771Q7L3S4 317 aaPredicted RBP9.33□□□□□ -0.92
CAST-232ENST00000510500 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 ZNF579Q8NAF0 562 aaKnown RBP9.33□□□□□ -0.92
CAST-232ENST00000510500 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
CAST-232ENST00000510500 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 DDX56Q9NY93 547 aaKnown RBP9.33□□□□□ -0.92
CAST-232ENST00000510500 C7P10643 843 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 INHBEP58166 350 aa9.33□□□□□ -0.92
CAST-232ENST00000510500 EEA1Q15075 1411 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 TPPPO94811 219 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 FGAP02671 866 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 IRX1P78414 480 aaPredicted RBP9.32□□□□□ -0.92
CAST-232ENST00000510500 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 MAPRE1Q15691 268 aaKnown RBP9.32□□□□□ -0.92
CAST-232ENST00000510500 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 VPS37AQ8NEZ2 397 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 C17orf50Q8WW18 174 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 SGIP1Q9BQI5 828 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
CAST-232ENST00000510500 MINK1Q8N4C8 1332 aaPredicted RBP9.32□□□□□ -0.92
CAST-232ENST00000510500 ERICH4A6NGS2 130 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 NAT2P11245 290 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 COL6A1P12109 1028 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TEKT1Q969V4 418 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 IQCGQ9H095 443 aaKnown RBP9.31□□□□□ -0.92
CAST-232ENST00000510500 CASS4Q9NQ75 786 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 IFT57Q9NWB7 429 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 ETAA1Q9NY74 926 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 PRKAG2Q9UGJ0 569 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 ODF2LQ9ULJ1 636 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
CAST-232ENST00000510500 CAND2O75155 1236 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 CCDC175P0C221 793 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TGFB3P10600 412 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TRAF1Q13077 416 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 SAFB2Q14151 953 aaKnown RBP eCLIP9.31□□□□□ -0.92
CAST-232ENST00000510500 KCTD2Q14681 263 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 E2F5Q15329 346 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 CCDC70Q6NSX1 233 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TRIM74Q86UV6 250 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TRIM73Q86UV7 250 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 HSCBQ8IWL3 235 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TDRD7Q8NHU6 1098 aaKnown RBP9.31□□□□□ -0.92
CAST-232ENST00000510500 CCDC47Q96A33 483 aaKnown RBP9.31□□□□□ -0.92
CAST-232ENST00000510500 KIF2CQ99661 725 aa9.31□□□□□ -0.92
CAST-232ENST00000510500 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
CAST-232ENST00000510500 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
CAST-232ENST00000510500 HSD3B2P26439 372 aa9.3□□□□□ -0.92
CAST-232ENST00000510500 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.92
CAST-232ENST00000510500 FILIP1LQ4L180 1135 aa9.3□□□□□ -0.92
CAST-232ENST00000510500 ZNF394Q53GI3 561 aa9.3□□□□□ -0.92
CAST-232ENST00000510500 TTC39BQ5VTQ0 682 aaPredicted RBP9.3□□□□□ -0.92
CAST-232ENST00000510500 TATDN2Q93075 761 aa9.3□□□□□ -0.92
CAST-232ENST00000510500 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
CAST-232ENST00000510500 HTATSF1O43719 755 aaKnown RBP9.29□□□□□ -0.92
CAST-232ENST00000510500 KINO60870 393 aaKnown RBP9.29□□□□□ -0.92
CAST-232ENST00000510500 OATP04181 439 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 LDHCP07864 332 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
CAST-232ENST00000510500 ALDH1B1P30837 517 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.92
CAST-232ENST00000510500 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
CAST-232ENST00000510500 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 B4GALNT3Q6L9W6 998 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 BHMTQ93088 406 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
CAST-232ENST00000510500 DEF6Q9H4E7 631 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 ZHX3Q9H4I2 956 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 VEZTQ9HBM0 779 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 AKAP2Q9Y2D5 859 aa9.29□□□□□ -0.92
CAST-232ENST00000510500 UQCRHLA0A096LP55 91 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 ECEL1O95672 775 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 UQCRHP07919 91 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 VIL1P09327 827 aaKnown RBP9.28□□□□□ -0.92
CAST-232ENST00000510500 ATP2B1P20020 1258 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 ATP6V1AP38606 617 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 JAZF1Q86VZ6 243 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 TTC30AQ86WT1 665 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 PHC3Q8NDX5 983 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 CHMP7Q8WUX9 453 aaPredicted RBP9.28□□□□□ -0.92
CAST-232ENST00000510500 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 RUNDC1Q96C34 613 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 MUC3BQ9H195 1237 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 ZSWIM4Q9H7M6 989 aa9.28□□□□□ -0.92
CAST-232ENST00000510500 CWC15Q9P013 229 aaKnown RBP9.28□□□□□ -0.92
CAST-232ENST00000510500 RSPH14Q9UHP6 348 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms