RNA–Protein interactions for RNA: ENST00000510106.5

CDK7-207, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-207ENST00000510106 PAPPAQ13219 1627 aa16.76■□□□□ 0.27
CDK7-207ENST00000510106 SCN11AQ9UI33 1791 aa16.75■□□□□ 0.27
CDK7-207ENST00000510106 PTGER2P43116 358 aa16.75■□□□□ 0.27
CDK7-207ENST00000510106 EIF5P55010 431 aaKnown RBP16.75■□□□□ 0.27
CDK7-207ENST00000510106 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
CDK7-207ENST00000510106 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
CDK7-207ENST00000510106 ITGB4P16144 1822 aa16.75■□□□□ 0.27
CDK7-207ENST00000510106 ZNF853P0CG23 659 aa16.74■□□□□ 0.27
CDK7-207ENST00000510106 ARXQ96QS3 562 aa16.74■□□□□ 0.27
CDK7-207ENST00000510106 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
CDK7-207ENST00000510106 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
CDK7-207ENST00000510106 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
CDK7-207ENST00000510106 FAM9BQ8IZU0 186 aa16.73■□□□□ 0.27
CDK7-207ENST00000510106 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
CDK7-207ENST00000510106 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
CDK7-207ENST00000510106 USP16Q9Y5T5 823 aa16.73■□□□□ 0.27
CDK7-207ENST00000510106 KCNQ3O43525 872 aa16.72■□□□□ 0.27
CDK7-207ENST00000510106 PHF14O94880 888 aa16.72■□□□□ 0.27
CDK7-207ENST00000510106 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
CDK7-207ENST00000510106 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
CDK7-207ENST00000510106 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
CDK7-207ENST00000510106 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
CDK7-207ENST00000510106 CD2APQ9Y5K6 639 aa16.71■□□□□ 0.27
CDK7-207ENST00000510106 C5P01031 1676 aa16.7■□□□□ 0.26
CDK7-207ENST00000510106 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
CDK7-207ENST00000510106 ZBTB1Q9Y2K1 713 aa16.7■□□□□ 0.26
CDK7-207ENST00000510106 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
CDK7-207ENST00000510106 GYS1P13807 737 aa16.69■□□□□ 0.26
CDK7-207ENST00000510106 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
CDK7-207ENST00000510106 C4BP0C0L5 1744 aa16.69■□□□□ 0.26
CDK7-207ENST00000510106 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
CDK7-207ENST00000510106 ERVV-1B6SEH8 477 aa16.68■□□□□ 0.26
CDK7-207ENST00000510106 A1BGP04217 495 aa16.68■□□□□ 0.26
CDK7-207ENST00000510106 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
CDK7-207ENST00000510106 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
CDK7-207ENST00000510106 TM4SF1P30408 202 aa16.66■□□□□ 0.26
CDK7-207ENST00000510106 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
CDK7-207ENST00000510106 MYH16Q9H6N6 1097 aa16.66■□□□□ 0.26
CDK7-207ENST00000510106 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
CDK7-207ENST00000510106 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
CDK7-207ENST00000510106 LRP5O75197 1615 aa16.66■□□□□ 0.26
CDK7-207ENST00000510106 COL15A1P39059 1388 aa16.65■□□□□ 0.26
CDK7-207ENST00000510106 SYT17Q9BSW7 474 aa16.65■□□□□ 0.26
CDK7-207ENST00000510106 DBF4Q9UBU7 674 aaPredicted RBP16.65■□□□□ 0.26
CDK7-207ENST00000510106 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
CDK7-207ENST00000510106 MMP10P09238 476 aa16.64■□□□□ 0.25
CDK7-207ENST00000510106 TGFB2P61812 414 aa16.64■□□□□ 0.25
CDK7-207ENST00000510106 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
CDK7-207ENST00000510106 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
CDK7-207ENST00000510106 DZIP3Q86Y13 1208 aaKnown RBP16.64■□□□□ 0.25
CDK7-207ENST00000510106 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDK7-207ENST00000510106 HYPKQ9NX55 129 aa16.64■□□□□ 0.25
CDK7-207ENST00000510106 SETDB2Q96T68 719 aa16.63■□□□□ 0.25
CDK7-207ENST00000510106 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
CDK7-207ENST00000510106 FKBP8Q14318 412 aa16.62■□□□□ 0.25
CDK7-207ENST00000510106 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
CDK7-207ENST00000510106 DUSP27Q5VZP5 1158 aa16.62■□□□□ 0.25
CDK7-207ENST00000510106 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
CDK7-207ENST00000510106 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
CDK7-207ENST00000510106 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
CDK7-207ENST00000510106 FHDC1Q9C0D6 1143 aaPredicted RBP16.62■□□□□ 0.25
CDK7-207ENST00000510106 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
CDK7-207ENST00000510106 PRAMEF22A3QJZ6 481 aa16.61■□□□□ 0.25
CDK7-207ENST00000510106 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
CDK7-207ENST00000510106 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
CDK7-207ENST00000510106 SIPA1L3O60292 1781 aaPredicted RBP16.6■□□□□ 0.25
CDK7-207ENST00000510106 E9PSI1 815 aa16.6■□□□□ 0.25
CDK7-207ENST00000510106 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
CDK7-207ENST00000510106 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
CDK7-207ENST00000510106 MIER1Q8N108 512 aa16.6■□□□□ 0.25
CDK7-207ENST00000510106 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
CDK7-207ENST00000510106 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
CDK7-207ENST00000510106 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
CDK7-207ENST00000510106 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
CDK7-207ENST00000510106 TPTE2Q6XPS3 522 aa16.59■□□□□ 0.25
CDK7-207ENST00000510106 SRP68Q9UHB9 627 aaKnown RBP16.59■□□□□ 0.25
CDK7-207ENST00000510106 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
CDK7-207ENST00000510106 TAF1LQ8IZX4 1826 aa16.59■□□□□ 0.25
CDK7-207ENST00000510106 NFIXQ14938 502 aa16.58■□□□□ 0.24
CDK7-207ENST00000510106 PDIA6Q15084 440 aa16.58■□□□□ 0.24
CDK7-207ENST00000510106 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
CDK7-207ENST00000510106 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
CDK7-207ENST00000510106 ZNF521Q96K83 1311 aa16.58■□□□□ 0.24
CDK7-207ENST00000510106 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
CDK7-207ENST00000510106 POLRMTO00411 1230 aaKnown RBP16.57■□□□□ 0.24
CDK7-207ENST00000510106 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
CDK7-207ENST00000510106 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
CDK7-207ENST00000510106 COL5A3P25940 1745 aaPredicted RBP16.56■□□□□ 0.24
CDK7-207ENST00000510106 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
CDK7-207ENST00000510106 SERPINB2P05120 415 aa16.56■□□□□ 0.24
CDK7-207ENST00000510106 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
CDK7-207ENST00000510106 MYL6BP14649 208 aa16.56■□□□□ 0.24
CDK7-207ENST00000510106 PARP10Q53GL7 1025 aa16.56■□□□□ 0.24
CDK7-207ENST00000510106 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
CDK7-207ENST00000510106 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
CDK7-207ENST00000510106 DDX58O95786 925 aaKnown RBP16.55■□□□□ 0.24
CDK7-207ENST00000510106 PDE6BP35913 854 aa16.55■□□□□ 0.24
CDK7-207ENST00000510106 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
CDK7-207ENST00000510106 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
CDK7-207ENST00000510106 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms