RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
PAPD4-212ENST00000509227 HRH3Q9Y5N1 445 aa8.85□□□□□ -0.99
PAPD4-212ENST00000509227 IL2RAP01589 272 aa8.84□□□□□ -0.99
PAPD4-212ENST00000509227 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
PAPD4-212ENST00000509227 PRRT3Q5FWE3 981 aa8.84□□□□□ -0.99
PAPD4-212ENST00000509227 GNASQ5JWF2 1037 aa8.84□□□□□ -0.99
PAPD4-212ENST00000509227 FAM182BQ5T319 152 aa8.83□□□□□ -1
PAPD4-212ENST00000509227 RAB6BQ9NRW1 208 aa8.83□□□□□ -1
PAPD4-212ENST00000509227 PCDHB9Q9Y5E1 797 aa8.83□□□□□ -1
PAPD4-212ENST00000509227 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
PAPD4-212ENST00000509227 H2AFB2P0C5Z0 115 aa8.82□□□□□ -1
PAPD4-212ENST00000509227 MCTP1Q6DN14 999 aa8.82□□□□□ -1
PAPD4-212ENST00000509227 DNAAF2Q9NVR5 837 aaKnown RBP8.82□□□□□ -1
PAPD4-212ENST00000509227 PCDHGC4Q9Y5F7 938 aa8.82□□□□□ -1
PAPD4-212ENST00000509227 COBLO75128 1261 aa8.81□□□□□ -1
PAPD4-212ENST00000509227 GTF2E1P29083 439 aaPredicted RBP8.81□□□□□ -1
PAPD4-212ENST00000509227 MCM6Q14566 821 aa8.81□□□□□ -1
PAPD4-212ENST00000509227 FHDC1Q9C0D6 1143 aaPredicted RBP8.81□□□□□ -1
PAPD4-212ENST00000509227 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
PAPD4-212ENST00000509227 TMEM214Q6NUQ4 689 aaKnown RBP8.8□□□□□ -1
PAPD4-212ENST00000509227 BANK1Q8NDB2 785 aa8.8□□□□□ -1
PAPD4-212ENST00000509227 NACC1Q96RE7 527 aa8.8□□□□□ -1
PAPD4-212ENST00000509227 ZCCHC2Q9C0B9 1178 aaKnown RBP8.8□□□□□ -1
PAPD4-212ENST00000509227 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
PAPD4-212ENST00000509227 ZBBXA8MT70 800 aa8.79□□□□□ -1
PAPD4-212ENST00000509227 XAGE2Q96GT9 111 aa8.79□□□□□ -1
PAPD4-212ENST00000509227 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
PAPD4-212ENST00000509227 PCDHB11Q9Y5F2 797 aa8.78□□□□□ -1
PAPD4-212ENST00000509227 NLRP8Q86W28 1048 aa8.77□□□□□ -1.01
PAPD4-212ENST00000509227 HCN2Q9UL51 889 aa8.77□□□□□ -1.01
PAPD4-212ENST00000509227 YBX3P16989 372 aaKnown RBP eCLIP8.76□□□□□ -1.01
PAPD4-212ENST00000509227 TXKP42681 527 aa8.76□□□□□ -1.01
PAPD4-212ENST00000509227 ZNF468Q5VIY5 522 aaPredicted RBP8.76□□□□□ -1.01
PAPD4-212ENST00000509227 RHBDD1Q8TEB9 315 aa8.76□□□□□ -1.01
PAPD4-212ENST00000509227 ATXN7O15265 892 aaPredicted RBP8.75□□□□□ -1.01
PAPD4-212ENST00000509227 PAX4O43316 350 aa8.75□□□□□ -1.01
PAPD4-212ENST00000509227 MAPTP10636 758 aaKnown RBP8.75□□□□□ -1.01
PAPD4-212ENST00000509227 MCCD1P59942 119 aaPredicted RBP8.75□□□□□ -1.01
PAPD4-212ENST00000509227 TNP2Q05952 138 aa8.75□□□□□ -1.01
PAPD4-212ENST00000509227 VAC14Q08AM6 782 aa8.75□□□□□ -1.01
PAPD4-212ENST00000509227 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
PAPD4-212ENST00000509227 ELOA3DA6NLF2 546 aaPredicted RBP8.74□□□□□ -1.01
PAPD4-212ENST00000509227 CD33P20138 364 aa8.74□□□□□ -1.01
PAPD4-212ENST00000509227 ELOA3BQ3SY89 546 aa8.74□□□□□ -1.01
PAPD4-212ENST00000509227 ELOA3Q8NG57 546 aa8.74□□□□□ -1.01
PAPD4-212ENST00000509227 NDUFB9Q9Y6M9 179 aa8.74□□□□□ -1.01
PAPD4-212ENST00000509227 COL17A1Q9UMD9 1497 aaPredicted RBP8.73□□□□□ -1.01
PAPD4-212ENST00000509227 PCBP4P57723 403 aaKnown RBP8.73□□□□□ -1.01
PAPD4-212ENST00000509227 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
PAPD4-212ENST00000509227 C1orf216Q8TAB5 229 aa8.73□□□□□ -1.01
PAPD4-212ENST00000509227 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
PAPD4-212ENST00000509227 STAU1O95793 577 aaKnown RBP8.72□□□□□ -1.01
PAPD4-212ENST00000509227 ALAS2P22557 587 aa8.72□□□□□ -1.01
PAPD4-212ENST00000509227 ABL2P42684 1182 aa8.72□□□□□ -1.01
PAPD4-212ENST00000509227 NR1H3Q13133 447 aa8.72□□□□□ -1.01
PAPD4-212ENST00000509227 TRIM28Q13263 835 aaKnown RBP8.72□□□□□ -1.01
PAPD4-212ENST00000509227 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
PAPD4-212ENST00000509227 TBC1D9Q6ZT07 1266 aa8.72□□□□□ -1.01
PAPD4-212ENST00000509227 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
PAPD4-212ENST00000509227 CDCA7Q9BWT1 371 aaPredicted RBP8.72□□□□□ -1.01
PAPD4-212ENST00000509227 DCDC2BA2VCK2 349 aa8.71□□□□□ -1.02
PAPD4-212ENST00000509227 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
PAPD4-212ENST00000509227 ESCO1Q5FWF5 840 aa8.71□□□□□ -1.02
PAPD4-212ENST00000509227 MDFIQ99750 246 aa8.71□□□□□ -1.02
PAPD4-212ENST00000509227 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.02
PAPD4-212ENST00000509227 POM121CA8CG34 1229 aa8.7□□□□□ -1.02
PAPD4-212ENST00000509227 ELNP15502 786 aa8.7□□□□□ -1.02
PAPD4-212ENST00000509227 ATP4AP20648 1035 aa8.7□□□□□ -1.02
PAPD4-212ENST00000509227 ZNF592Q92610 1267 aa8.7□□□□□ -1.02
PAPD4-212ENST00000509227 CCDC85AQ96PX6 553 aaPredicted RBP8.7□□□□□ -1.02
PAPD4-212ENST00000509227 PRR12Q9ULL5 1215 aa8.7□□□□□ -1.02
PAPD4-212ENST00000509227 C9orf172C9J069 976 aa8.69□□□□□ -1.02
PAPD4-212ENST00000509227 ADGRE1Q14246 886 aa8.69□□□□□ -1.02
PAPD4-212ENST00000509227 GRIK4Q16099 956 aa8.69□□□□□ -1.02
PAPD4-212ENST00000509227 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
PAPD4-212ENST00000509227 KHNYNO15037 678 aaKnown RBP8.68□□□□□ -1.02
PAPD4-212ENST00000509227 ADAMTS19Q8TE59 1207 aa8.68□□□□□ -1.02
PAPD4-212ENST00000509227 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
PAPD4-212ENST00000509227 SOCS7O14512 581 aa8.67□□□□□ -1.02
PAPD4-212ENST00000509227 MYCP01106 439 aaPredicted RBP8.67□□□□□ -1.02
PAPD4-212ENST00000509227 FAM157BP0CG42 384 aa8.67□□□□□ -1.02
PAPD4-212ENST00000509227 PLA2G4AP47712 749 aa8.67□□□□□ -1.02
PAPD4-212ENST00000509227 M0R082 166 aa8.66□□□□□ -1.02
PAPD4-212ENST00000509227 MBTPS1Q14703 1052 aa8.66□□□□□ -1.02
PAPD4-212ENST00000509227 TMEM132AQ24JP5 1023 aa8.66□□□□□ -1.02
PAPD4-212ENST00000509227 ZNF417Q8TAU3 575 aa8.66□□□□□ -1.02
PAPD4-212ENST00000509227 ZNF587Q96SQ5 575 aaPredicted RBP8.66□□□□□ -1.02
PAPD4-212ENST00000509227 RNF112Q9ULX5 631 aa8.66□□□□□ -1.02
PAPD4-212ENST00000509227 ARID1BQ8NFD5 2236 aaPredicted RBP8.66□□□□□ -1.02
PAPD4-212ENST00000509227 A0A1W2PNR3 127 aa8.65□□□□□ -1.02
PAPD4-212ENST00000509227 TXNRD3Q86VQ6 643 aa8.65□□□□□ -1.02
PAPD4-212ENST00000509227 KRTAP4-9Q9BYQ8 210 aa8.65□□□□□ -1.02
PAPD4-212ENST00000509227 ADARB2-AS1A8MUL3 147 aa8.64□□□□□ -1.03
PAPD4-212ENST00000509227 TLR1Q15399 786 aa8.64□□□□□ -1.03
PAPD4-212ENST00000509227 PHTF2Q8N3S3 785 aa8.64□□□□□ -1.03
PAPD4-212ENST00000509227 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
PAPD4-212ENST00000509227 NID1P14543 1247 aa8.63□□□□□ -1.03
PAPD4-212ENST00000509227 LAMC2Q13753 1193 aa8.63□□□□□ -1.03
PAPD4-212ENST00000509227 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
PAPD4-212ENST00000509227 SIN3BO75182 1162 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms