RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
TRIO-212ENST00000508717 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
TRIO-212ENST00000508717 TSPYL6Q8N831 410 aa17.02■□□□□ 0.32
TRIO-212ENST00000508717 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
TRIO-212ENST00000508717 VAMP4O75379 141 aa17.01■□□□□ 0.31
TRIO-212ENST00000508717 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
TRIO-212ENST00000508717 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
TRIO-212ENST00000508717 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
TRIO-212ENST00000508717 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
TRIO-212ENST00000508717 C4BP0C0L5 1744 aa17■□□□□ 0.31
TRIO-212ENST00000508717 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
TRIO-212ENST00000508717 KCNQ4P56696 695 aa17■□□□□ 0.31
TRIO-212ENST00000508717 INTS5Q6P9B9 1019 aaKnown RBP17■□□□□ 0.31
TRIO-212ENST00000508717 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
TRIO-212ENST00000508717 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
TRIO-212ENST00000508717 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
TRIO-212ENST00000508717 IL6STP40189 918 aaPredicted RBP16.98■□□□□ 0.31
TRIO-212ENST00000508717 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
TRIO-212ENST00000508717 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
TRIO-212ENST00000508717 ADRA2BP18089 450 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
TRIO-212ENST00000508717 PDIA6Q15084 440 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 LRP10Q7Z4F1 713 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 DDX21Q9NR30 783 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRIO-212ENST00000508717 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
TRIO-212ENST00000508717 ZBTB1Q9Y2K1 713 aa16.97■□□□□ 0.31
TRIO-212ENST00000508717 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
TRIO-212ENST00000508717 A1BGP04217 495 aa16.96■□□□□ 0.31
TRIO-212ENST00000508717 SSFA2P28290 1259 aa16.96■□□□□ 0.31
TRIO-212ENST00000508717 ZNF827Q17R98 1081 aa16.96■□□□□ 0.31
TRIO-212ENST00000508717 NBPF14Q5TI25 921 aa16.96■□□□□ 0.31
TRIO-212ENST00000508717 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
TRIO-212ENST00000508717 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
TRIO-212ENST00000508717 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
TRIO-212ENST00000508717 EIF2S2P20042 333 aaKnown RBP16.95■□□□□ 0.3
TRIO-212ENST00000508717 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
TRIO-212ENST00000508717 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
TRIO-212ENST00000508717 AK7Q96M32 723 aa16.95■□□□□ 0.3
TRIO-212ENST00000508717 STK32BQ9NY57 414 aa16.95■□□□□ 0.3
TRIO-212ENST00000508717 QSER1Q2KHR3 1735 aa16.94■□□□□ 0.3
TRIO-212ENST00000508717 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
TRIO-212ENST00000508717 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
TRIO-212ENST00000508717 UBR3Q6ZT12 1888 aa16.94■□□□□ 0.3
TRIO-212ENST00000508717 RGL2O15211 777 aa16.93■□□□□ 0.3
TRIO-212ENST00000508717 HYPKQ9NX55 129 aa16.93■□□□□ 0.3
TRIO-212ENST00000508717 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
TRIO-212ENST00000508717 GNPATO15228 680 aa16.92■□□□□ 0.3
TRIO-212ENST00000508717 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
TRIO-212ENST00000508717 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
TRIO-212ENST00000508717 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
TRIO-212ENST00000508717 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
TRIO-212ENST00000508717 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
TRIO-212ENST00000508717 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
TRIO-212ENST00000508717 COL15A1P39059 1388 aa16.9■□□□□ 0.3
TRIO-212ENST00000508717 A0A087WZG4 1122 aa16.9■□□□□ 0.3
TRIO-212ENST00000508717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
TRIO-212ENST00000508717 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
TRIO-212ENST00000508717 PROSER3Q2NL68 480 aa16.9■□□□□ 0.3
TRIO-212ENST00000508717 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
TRIO-212ENST00000508717 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
TRIO-212ENST00000508717 SSH1Q8WYL5 1049 aa16.89■□□□□ 0.29
TRIO-212ENST00000508717 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
TRIO-212ENST00000508717 MRPL50Q8N5N7 158 aaKnown RBP16.88■□□□□ 0.29
TRIO-212ENST00000508717 NECTIN2Q92692 538 aa16.88■□□□□ 0.29
TRIO-212ENST00000508717 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
TRIO-212ENST00000508717 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
TRIO-212ENST00000508717 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
TRIO-212ENST00000508717 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
TRIO-212ENST00000508717 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
TRIO-212ENST00000508717 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
TRIO-212ENST00000508717 SLC16A10Q8TF71 515 aa16.87■□□□□ 0.29
TRIO-212ENST00000508717 ANXA1P04083 346 aa16.86■□□□□ 0.29
TRIO-212ENST00000508717 MYL6BP14649 208 aa16.86■□□□□ 0.29
TRIO-212ENST00000508717 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
TRIO-212ENST00000508717 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
TRIO-212ENST00000508717 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
TRIO-212ENST00000508717 RFC4P35249 363 aa16.85■□□□□ 0.29
TRIO-212ENST00000508717 CLEC4GQ6UXB4 293 aa16.85■□□□□ 0.29
TRIO-212ENST00000508717 DZIP3Q86Y13 1208 aaKnown RBP16.85■□□□□ 0.29
TRIO-212ENST00000508717 XAGE3Q8WTP9 111 aa16.85■□□□□ 0.29
TRIO-212ENST00000508717 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
TRIO-212ENST00000508717 FLIIQ13045 1269 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 G2E3Q7L622 706 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 PTPRCP08575 1304 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
TRIO-212ENST00000508717 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
TRIO-212ENST00000508717 PHF14O94880 888 aa16.83■□□□□ 0.28
TRIO-212ENST00000508717 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
TRIO-212ENST00000508717 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
TRIO-212ENST00000508717 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
TRIO-212ENST00000508717 PLBD2Q8NHP8 589 aa16.83■□□□□ 0.28
TRIO-212ENST00000508717 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
TRIO-212ENST00000508717 TBC1D2BQ9UPU7 963 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms