RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 RAB6BQ9NRW1 208 aa6.81□□□□□ -1.32
COL4A3BP-205ENST00000508692 CEP126Q9P2H0 1117 aa6.81□□□□□ -1.32
COL4A3BP-205ENST00000508692 USTQ9Y2C2 406 aa6.81□□□□□ -1.32
COL4A3BP-205ENST00000508692 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 C2CD2LO14523 706 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 GNB5O14775 395 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 ATG7O95352 703 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 GGA1Q9UJY5 639 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 PHF24Q9UPV7 400 aa6.8□□□□□ -1.32
COL4A3BP-205ENST00000508692 BMP4P12644 408 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 SKIP12755 728 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 TRIM26Q12899 539 aaPredicted RBP6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 MAP7D1Q3KQU3 841 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 SLCO4C1Q6ZQN7 724 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 SEMA6BQ9H3T3 888 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 RUBCNLQ9H714 662 aa6.79□□□□□ -1.32
COL4A3BP-205ENST00000508692 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
COL4A3BP-205ENST00000508692 DOC2BQ14184 412 aa6.78□□□□□ -1.32
COL4A3BP-205ENST00000508692 ZMYM1Q5SVZ6 1142 aa6.78□□□□□ -1.32
COL4A3BP-205ENST00000508692 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
COL4A3BP-205ENST00000508692 PODXL2Q9NZ53 605 aa6.78□□□□□ -1.32
COL4A3BP-205ENST00000508692 PCDHB11Q9Y5F2 797 aa6.78□□□□□ -1.32
COL4A3BP-205ENST00000508692 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 USP17L5A8MUK1 530 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 IL2RAP01589 272 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 DGKGP49619 791 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 CTBSQ01459 385 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 RNF135Q8IUD6 432 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 PHTF2Q8N3S3 785 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 BTBD6Q96KE9 485 aa6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 ATXN7L1Q9ULK2 861 aaPredicted RBP6.77□□□□□ -1.33
COL4A3BP-205ENST00000508692 USP17L3A6NCW0 530 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 USP17L4A6NCW7 530 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 EPXP11678 715 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 KANK4Q5T7N3 995 aaPredicted RBP6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 USP17L2Q6R6M4 530 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 USP17L1Q7RTZ2 530 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 CNKSR1Q969H4 720 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 CHIC2Q9UKJ5 165 aa6.76□□□□□ -1.33
COL4A3BP-205ENST00000508692 PIK3CDO00329 1044 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 PIK3R2O00459 728 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 FGFR3P22607 806 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 CENPCQ03188 943 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 ELOAQ14241 798 aaKnown RBP6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 PGBD3Q8N328 593 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 ESYT1Q9BSJ8 1104 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 NDFIP2Q9NV92 336 aa6.75□□□□□ -1.33
COL4A3BP-205ENST00000508692 BNIP3LO60238 219 aa6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 MSX1P28360 303 aa6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 C4orf17Q53FE4 359 aa6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 CDCA8Q53HL2 280 aa6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 LARP1Q6PKG0 1096 aaKnown RBP6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 ZSCAN10Q96SZ4 725 aaPredicted RBP6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 NOP53Q9NZM5 478 aaKnown RBP6.74□□□□□ -1.33
COL4A3BP-205ENST00000508692 NEURL1BA8MQ27 555 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 BRD1O95696 1058 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 GNRH1P01148 92 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 EML3Q32P44 896 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 FOXD4L6Q3SYB3 417 aaPredicted RBP6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 EFHC2Q5JST6 749 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 B4GALNT3Q6L9W6 998 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 FOXD4L3Q6VB84 417 aaPredicted RBP6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 TRIM50Q86XT4 487 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 AEBP1Q8IUX7 1158 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 FHDC1Q9C0D6 1143 aaPredicted RBP6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 ESF1Q9H501 851 aaKnown RBP6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 MKRN1Q9UHC7 482 aaKnown RBP6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 HRH3Q9Y5N1 445 aa6.73□□□□□ -1.33
COL4A3BP-205ENST00000508692 SCO2A0A1W2PP80 73 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 FAM196BA6NMK8 535 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 KCNA1Q09470 495 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 GNASQ5JWF2 1037 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 SIRT1Q96EB6 747 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 KRTAP4-12Q9BQ66 201 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 NOD1Q9Y239 953 aa6.72□□□□□ -1.33
COL4A3BP-205ENST00000508692 ARAFP10398 606 aa6.71□□□□□ -1.34
COL4A3BP-205ENST00000508692 NCOA4Q13772 614 aa6.71□□□□□ -1.34
COL4A3BP-205ENST00000508692 TMEM214Q6NUQ4 689 aaKnown RBP6.71□□□□□ -1.34
COL4A3BP-205ENST00000508692 CHSY3Q70JA7 882 aa6.71□□□□□ -1.34
COL4A3BP-205ENST00000508692 DEPDC4Q8N2C3 294 aa6.71□□□□□ -1.34
COL4A3BP-205ENST00000508692 DOLKQ9UPQ8 538 aa6.71□□□□□ -1.34
COL4A3BP-205ENST00000508692 RASA1P20936 1047 aa6.7□□□□□ -1.34
COL4A3BP-205ENST00000508692 GATA4P43694 442 aa6.7□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP4Q13107 963 aa6.7□□□□□ -1.34
COL4A3BP-205ENST00000508692 CDCA7Q9BWT1 371 aaPredicted RBP6.7□□□□□ -1.34
COL4A3BP-205ENST00000508692 TMEM88BA6NKF7 163 aa6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 RSPO4Q2I0M5 234 aaPredicted RBP6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 LARGE2Q8N3Y3 721 aa6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 FAM200AQ8TCP9 573 aa6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 TRIM11Q96F44 468 aa6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 XAGE2Q96GT9 111 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms