RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 NUP188Q5SRE5 1749 aa20.46■□□□□ 0.87
NFKB1-207ENST00000508584 GIGYF1O75420 1035 aaPredicted RBP20.45■□□□□ 0.86
NFKB1-207ENST00000508584 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
NFKB1-207ENST00000508584 API5Q9BZZ5 524 aaKnown RBP20.45■□□□□ 0.86
NFKB1-207ENST00000508584 BCL9O00512 1426 aa20.44■□□□□ 0.86
NFKB1-207ENST00000508584 TMOD3Q9NYL9 352 aa20.44■□□□□ 0.86
NFKB1-207ENST00000508584 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
NFKB1-207ENST00000508584 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
NFKB1-207ENST00000508584 PTPRCP08575 1304 aa20.43■□□□□ 0.86
NFKB1-207ENST00000508584 TOGARAM1Q9Y4F4 1720 aa20.42■□□□□ 0.86
NFKB1-207ENST00000508584 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
NFKB1-207ENST00000508584 MVPQ14764 893 aaKnown RBP20.42■□□□□ 0.86
NFKB1-207ENST00000508584 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
NFKB1-207ENST00000508584 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
NFKB1-207ENST00000508584 CCDC136Q96JN2 1154 aa20.42■□□□□ 0.86
NFKB1-207ENST00000508584 PTF1AQ7RTS3 328 aa20.41■□□□□ 0.86
NFKB1-207ENST00000508584 SPON1Q9HCB6 807 aa20.41■□□□□ 0.86
NFKB1-207ENST00000508584 ABCC4O15439 1325 aa20.4■□□□□ 0.86
NFKB1-207ENST00000508584 G2E3Q7L622 706 aa20.4■□□□□ 0.86
NFKB1-207ENST00000508584 TMEM57Q8N5G2 664 aa20.4■□□□□ 0.86
NFKB1-207ENST00000508584 KCNQ2O43526 872 aa20.39■□□□□ 0.85
NFKB1-207ENST00000508584 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
NFKB1-207ENST00000508584 AAMPQ13685 434 aa20.39■□□□□ 0.85
NFKB1-207ENST00000508584 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.85
NFKB1-207ENST00000508584 PIGBQ92521 554 aa20.39■□□□□ 0.85
NFKB1-207ENST00000508584 PPP1R1BQ9UD71 204 aaPredicted RBP20.39■□□□□ 0.85
NFKB1-207ENST00000508584 RGPD3A6NKT7 1758 aaPredicted RBP20.39■□□□□ 0.85
NFKB1-207ENST00000508584 RGPD4Q7Z3J3 1758 aa20.39■□□□□ 0.85
NFKB1-207ENST00000508584 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
NFKB1-207ENST00000508584 PRAMEF22A3QJZ6 481 aa20.38■□□□□ 0.85
NFKB1-207ENST00000508584 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
NFKB1-207ENST00000508584 FLIIQ13045 1269 aa20.37■□□□□ 0.85
NFKB1-207ENST00000508584 DBF4Q9UBU7 674 aaPredicted RBP20.37■□□□□ 0.85
NFKB1-207ENST00000508584 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
NFKB1-207ENST00000508584 PRIM1P49642 420 aaKnown RBP20.36■□□□□ 0.85
NFKB1-207ENST00000508584 PROM2Q8N271 834 aa20.36■□□□□ 0.85
NFKB1-207ENST00000508584 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
NFKB1-207ENST00000508584 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
NFKB1-207ENST00000508584 SBF2Q86WG5 1849 aa20.36■□□□□ 0.85
NFKB1-207ENST00000508584 TXNRD1Q16881 649 aa20.35■□□□□ 0.85
NFKB1-207ENST00000508584 SYTL4Q96C24 671 aaPredicted RBP20.35■□□□□ 0.85
NFKB1-207ENST00000508584 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
NFKB1-207ENST00000508584 PTCD1O75127 700 aaKnown RBP20.33■□□□□ 0.85
NFKB1-207ENST00000508584 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.85
NFKB1-207ENST00000508584 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
NFKB1-207ENST00000508584 ASAP1Q9ULH1 1129 aa20.33■□□□□ 0.85
NFKB1-207ENST00000508584 UBR2Q8IWV8 1755 aa20.33■□□□□ 0.84
NFKB1-207ENST00000508584 C5P01031 1676 aa20.32■□□□□ 0.84
NFKB1-207ENST00000508584 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
NFKB1-207ENST00000508584 ACSBG1Q96GR2 724 aa20.32■□□□□ 0.84
NFKB1-207ENST00000508584 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
NFKB1-207ENST00000508584 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
NFKB1-207ENST00000508584 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
NFKB1-207ENST00000508584 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
NFKB1-207ENST00000508584 USP16Q9Y5T5 823 aa20.32■□□□□ 0.84
NFKB1-207ENST00000508584 DOT1LQ8TEK3 1739 aa20.32■□□□□ 0.84
NFKB1-207ENST00000508584 ANXA1P04083 346 aa20.31■□□□□ 0.84
NFKB1-207ENST00000508584 PROSER3Q2NL68 480 aa20.31■□□□□ 0.84
NFKB1-207ENST00000508584 PDIA6Q15084 440 aa20.3■□□□□ 0.84
NFKB1-207ENST00000508584 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
NFKB1-207ENST00000508584 ITGB4P16144 1822 aa20.3■□□□□ 0.84
NFKB1-207ENST00000508584 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
NFKB1-207ENST00000508584 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
NFKB1-207ENST00000508584 F6X3S4 739 aa20.29■□□□□ 0.84
NFKB1-207ENST00000508584 CCT4P50991 539 aaKnown RBP20.29■□□□□ 0.84
NFKB1-207ENST00000508584 SLC15A2Q16348 729 aa20.29■□□□□ 0.84
NFKB1-207ENST00000508584 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
NFKB1-207ENST00000508584 SLC4A10Q6U841 1118 aa20.28■□□□□ 0.84
NFKB1-207ENST00000508584 RBM42Q9BTD8 480 aaKnown RBP20.28■□□□□ 0.84
NFKB1-207ENST00000508584 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
NFKB1-207ENST00000508584 ZBTB40Q9NUA8 1239 aa20.28■□□□□ 0.84
NFKB1-207ENST00000508584 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
NFKB1-207ENST00000508584 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
NFKB1-207ENST00000508584 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
NFKB1-207ENST00000508584 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
NFKB1-207ENST00000508584 MYL6BP14649 208 aa20.26■□□□□ 0.83
NFKB1-207ENST00000508584 PDGFDQ9GZP0 370 aaPredicted RBP20.26■□□□□ 0.83
NFKB1-207ENST00000508584 CACNA1FO60840 1977 aa20.25■□□□□ 0.83
NFKB1-207ENST00000508584 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
NFKB1-207ENST00000508584 CASZ1Q86V15 1759 aa20.24■□□□□ 0.83
NFKB1-207ENST00000508584 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
NFKB1-207ENST00000508584 DNAJC10Q8IXB1 793 aa20.24■□□□□ 0.83
NFKB1-207ENST00000508584 DNAAF4Q8WXU2 420 aa20.24■□□□□ 0.83
NFKB1-207ENST00000508584 SMARCC1Q92922 1105 aaPredicted RBP20.24■□□□□ 0.83
NFKB1-207ENST00000508584 ADCY9O60503 1353 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
NFKB1-207ENST00000508584 LRP10Q7Z4F1 713 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 XAGE3Q8WTP9 111 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
NFKB1-207ENST00000508584 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
NFKB1-207ENST00000508584 NBPF26B4DH59 902 aa20.22■□□□□ 0.83
NFKB1-207ENST00000508584 STARD3NLO95772 234 aa20.22■□□□□ 0.83
NFKB1-207ENST00000508584 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
NFKB1-207ENST00000508584 NBPF10Q6P3W6 841 aaKnown RBP20.22■□□□□ 0.83
NFKB1-207ENST00000508584 NBPF15Q8N660 670 aa20.22■□□□□ 0.83
NFKB1-207ENST00000508584 SLC4A9Q96Q91 983 aa20.22■□□□□ 0.83
NFKB1-207ENST00000508584 A1BGP04217 495 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms