RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 ADAMTS8Q9UP79 889 aa20.53■□□□□ 0.88
COL1A1-211ENST00000507689 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
COL1A1-211ENST00000507689 PARP3Q9Y6F1 533 aa20.53■□□□□ 0.88
COL1A1-211ENST00000507689 MMP10P09238 476 aa20.52■□□□□ 0.88
COL1A1-211ENST00000507689 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
COL1A1-211ENST00000507689 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
COL1A1-211ENST00000507689 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
COL1A1-211ENST00000507689 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
COL1A1-211ENST00000507689 SIPA1L3O60292 1781 aaPredicted RBP20.51■□□□□ 0.87
COL1A1-211ENST00000507689 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
COL1A1-211ENST00000507689 SOS1Q07889 1333 aaPredicted RBP20.51■□□□□ 0.87
COL1A1-211ENST00000507689 GPR162Q16538 588 aa20.5■□□□□ 0.87
COL1A1-211ENST00000507689 USP42Q9H9J4 1324 aaKnown RBP20.5■□□□□ 0.87
COL1A1-211ENST00000507689 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
COL1A1-211ENST00000507689 COL15A1P39059 1388 aa20.49■□□□□ 0.87
COL1A1-211ENST00000507689 KCNQ3O43525 872 aa20.49■□□□□ 0.87
COL1A1-211ENST00000507689 GYS1P13807 737 aa20.49■□□□□ 0.87
COL1A1-211ENST00000507689 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
COL1A1-211ENST00000507689 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
COL1A1-211ENST00000507689 THUMPD2Q9BTF0 503 aaKnown RBP20.48■□□□□ 0.87
COL1A1-211ENST00000507689 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
COL1A1-211ENST00000507689 IL6STP40189 918 aaPredicted RBP20.47■□□□□ 0.87
COL1A1-211ENST00000507689 USPL1Q5W0Q7 1092 aa20.47■□□□□ 0.87
COL1A1-211ENST00000507689 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
COL1A1-211ENST00000507689 SRP68Q9UHB9 627 aaKnown RBP20.47■□□□□ 0.87
COL1A1-211ENST00000507689 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
COL1A1-211ENST00000507689 BABAM1Q9NWV8 329 aa20.46■□□□□ 0.87
COL1A1-211ENST00000507689 DLG5Q8TDM6 1919 aa20.46■□□□□ 0.87
COL1A1-211ENST00000507689 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
COL1A1-211ENST00000507689 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
COL1A1-211ENST00000507689 A1BGP04217 495 aa20.44■□□□□ 0.86
COL1A1-211ENST00000507689 EIF5P55010 431 aaKnown RBP20.44■□□□□ 0.86
COL1A1-211ENST00000507689 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
COL1A1-211ENST00000507689 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
COL1A1-211ENST00000507689 FKBP8Q14318 412 aa20.43■□□□□ 0.86
COL1A1-211ENST00000507689 NLGN2Q8NFZ4 835 aa20.43■□□□□ 0.86
COL1A1-211ENST00000507689 C4AP0C0L4 1744 aa20.42■□□□□ 0.86
COL1A1-211ENST00000507689 NPHP1O15259 732 aa20.41■□□□□ 0.86
COL1A1-211ENST00000507689 EIF4A1P60842 406 aaKnown RBP20.41■□□□□ 0.86
COL1A1-211ENST00000507689 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
COL1A1-211ENST00000507689 APAF1O14727 1248 aa20.4■□□□□ 0.86
COL1A1-211ENST00000507689 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
COL1A1-211ENST00000507689 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
COL1A1-211ENST00000507689 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
COL1A1-211ENST00000507689 PRAMEF22A3QJZ6 481 aa20.39■□□□□ 0.85
COL1A1-211ENST00000507689 GIGYF1O75420 1035 aaPredicted RBP20.39■□□□□ 0.85
COL1A1-211ENST00000507689 TGFB2P61812 414 aa20.39■□□□□ 0.85
COL1A1-211ENST00000507689 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
COL1A1-211ENST00000507689 YY1P25490 414 aa20.37■□□□□ 0.85
COL1A1-211ENST00000507689 TRIM35Q9UPQ4 493 aa20.37■□□□□ 0.85
COL1A1-211ENST00000507689 TM4SF1P30408 202 aa20.36■□□□□ 0.85
COL1A1-211ENST00000507689 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
COL1A1-211ENST00000507689 NFIXQ14938 502 aa20.36■□□□□ 0.85
COL1A1-211ENST00000507689 SETDB2Q96T68 719 aa20.36■□□□□ 0.85
COL1A1-211ENST00000507689 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
COL1A1-211ENST00000507689 POLRMTO00411 1230 aaKnown RBP20.35■□□□□ 0.85
COL1A1-211ENST00000507689 KIF6Q6ZMV9 814 aa20.35■□□□□ 0.85
COL1A1-211ENST00000507689 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 CHL1O00533 1208 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 SERPINB2P05120 415 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
COL1A1-211ENST00000507689 GNAI1P63096 354 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 DDR1Q08345 913 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
COL1A1-211ENST00000507689 MYL6BP14649 208 aa20.33■□□□□ 0.85
COL1A1-211ENST00000507689 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
COL1A1-211ENST00000507689 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.84
COL1A1-211ENST00000507689 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
COL1A1-211ENST00000507689 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
COL1A1-211ENST00000507689 CARMIL3Q8ND23 1372 aa20.32■□□□□ 0.84
COL1A1-211ENST00000507689 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 A0A0G2JLW4 131 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 RGL2O15211 777 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 NBPF10Q6P3W6 841 aaKnown RBP20.31■□□□□ 0.84
COL1A1-211ENST00000507689 NBPF15Q8N660 670 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 CHMP4AQ9BY43 222 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 IFT57Q9NWB7 429 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
COL1A1-211ENST00000507689 ST5P78524 1137 aa20.3■□□□□ 0.84
COL1A1-211ENST00000507689 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
COL1A1-211ENST00000507689 DPEP1P16444 411 aa20.29■□□□□ 0.84
COL1A1-211ENST00000507689 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
COL1A1-211ENST00000507689 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
COL1A1-211ENST00000507689 PIM2Q9P1W9 311 aa20.29■□□□□ 0.84
COL1A1-211ENST00000507689 BCS1LQ9Y276 419 aa20.29■□□□□ 0.84
COL1A1-211ENST00000507689 HOXB7P09629 217 aa20.28■□□□□ 0.84
COL1A1-211ENST00000507689 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
COL1A1-211ENST00000507689 NBPF5PQ86XG9 351 aaPredicted RBP20.28■□□□□ 0.84
COL1A1-211ENST00000507689 PDZRN3Q9UPQ7 1066 aa20.28■□□□□ 0.84
COL1A1-211ENST00000507689 SCN7AQ01118 1682 aa20.28■□□□□ 0.84
COL1A1-211ENST00000507689 PXDNLA1KZ92 1463 aa20.27■□□□□ 0.84
COL1A1-211ENST00000507689 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
COL1A1-211ENST00000507689 PDE6BP35913 854 aa20.27■□□□□ 0.84
COL1A1-211ENST00000507689 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
COL1A1-211ENST00000507689 NECTIN2Q92692 538 aa20.27■□□□□ 0.84
COL1A1-211ENST00000507689 MBIPQ9NS73 344 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms