RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 ADH6P28332 368 aa6.89□□□□□ -1.31
AC008539.1-201ENST00000507653 NLRP3Q96P20 1036 aa6.89□□□□□ -1.31
AC008539.1-201ENST00000507653 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
AC008539.1-201ENST00000507653 PRM3Q9NNZ6 103 aa6.89□□□□□ -1.31
AC008539.1-201ENST00000507653 ZBBXA8MT70 800 aa6.88□□□□□ -1.31
AC008539.1-201ENST00000507653 CLN3Q13286 438 aa6.88□□□□□ -1.31
AC008539.1-201ENST00000507653 GRIK4Q16099 956 aa6.88□□□□□ -1.31
AC008539.1-201ENST00000507653 A0A1B0GTH6 734 aa6.87□□□□□ -1.31
AC008539.1-201ENST00000507653 EPS8L1Q8TE68 723 aa6.87□□□□□ -1.31
AC008539.1-201ENST00000507653 GJD4Q96KN9 370 aaPredicted RBP6.87□□□□□ -1.31
AC008539.1-201ENST00000507653 TRIM34Q9BYJ4 488 aa6.87□□□□□ -1.31
AC008539.1-201ENST00000507653 HMX1Q9NP08 348 aaPredicted RBP6.87□□□□□ -1.31
AC008539.1-201ENST00000507653 HCN2Q9UL51 889 aa6.87□□□□□ -1.31
AC008539.1-201ENST00000507653 COL9A3Q14050 684 aaPredicted RBP6.86□□□□□ -1.31
AC008539.1-201ENST00000507653 ADGRE1Q14246 886 aa6.86□□□□□ -1.31
AC008539.1-201ENST00000507653 PCMTD2Q9NV79 361 aa6.86□□□□□ -1.31
AC008539.1-201ENST00000507653 PCDHB9Q9Y5E1 797 aa6.86□□□□□ -1.31
AC008539.1-201ENST00000507653 PHKA2P46019 1235 aa6.85□□□□□ -1.31
AC008539.1-201ENST00000507653 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
AC008539.1-201ENST00000507653 EFHC2Q5JST6 749 aa6.84□□□□□ -1.31
AC008539.1-201ENST00000507653 MTMR14Q8NCE2 650 aa6.84□□□□□ -1.31
AC008539.1-201ENST00000507653 CSB-PGBD3P0DP91 1061 aa6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 FLIIQ13045 1269 aa6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 PGBD3Q8N328 593 aa6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 AVENQ9NQS1 362 aaPredicted RBP6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 NDUFB9Q9Y6M9 179 aa6.83□□□□□ -1.32
AC008539.1-201ENST00000507653 MSX1P28360 303 aa6.82□□□□□ -1.32
AC008539.1-201ENST00000507653 TXNRD3Q86VQ6 643 aa6.82□□□□□ -1.32
AC008539.1-201ENST00000507653 SSBP4Q9BWG4 385 aaPredicted RBP6.82□□□□□ -1.32
AC008539.1-201ENST00000507653 DNAAF2Q9NVR5 837 aaKnown RBP6.82□□□□□ -1.32
AC008539.1-201ENST00000507653 OAS3Q9Y6K5 1087 aaKnown RBP6.82□□□□□ -1.32
AC008539.1-201ENST00000507653 NR1H3Q13133 447 aa6.81□□□□□ -1.32
AC008539.1-201ENST00000507653 TRIM28Q13263 835 aaKnown RBP6.81□□□□□ -1.32
AC008539.1-201ENST00000507653 MCM6Q14566 821 aa6.81□□□□□ -1.32
AC008539.1-201ENST00000507653 CYP2U1Q7Z449 544 aa6.81□□□□□ -1.32
AC008539.1-201ENST00000507653 CCER1Q8TC90 406 aaPredicted RBP6.81□□□□□ -1.32
AC008539.1-201ENST00000507653 C9orf172C9J069 976 aa6.8□□□□□ -1.32
AC008539.1-201ENST00000507653 GPR37L1O60883 481 aa6.8□□□□□ -1.32
AC008539.1-201ENST00000507653 SELPP16109 830 aa6.8□□□□□ -1.32
AC008539.1-201ENST00000507653 SNRKQ9NRH2 765 aa6.8□□□□□ -1.32
AC008539.1-201ENST00000507653 GTF2E1P29083 439 aaPredicted RBP6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 ERVK-9P63128 1117 aa6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 FAM182BQ5T319 152 aa6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 CC2D2BQ6DHV5 1058 aa6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 MDFIQ99750 246 aa6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 CRISPLD1Q9H336 500 aa6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 ARHGEF10LQ9HCE6 1279 aa6.79□□□□□ -1.32
AC008539.1-201ENST00000507653 GIGYF1O75420 1035 aaPredicted RBP6.78□□□□□ -1.32
AC008539.1-201ENST00000507653 MYCP01106 439 aaPredicted RBP6.78□□□□□ -1.32
AC008539.1-201ENST00000507653 FBXO45P0C2W1 286 aa6.78□□□□□ -1.32
AC008539.1-201ENST00000507653 SSTR4P31391 388 aa6.77□□□□□ -1.33
AC008539.1-201ENST00000507653 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
AC008539.1-201ENST00000507653 ZCCHC2Q9C0B9 1178 aaKnown RBP6.77□□□□□ -1.33
AC008539.1-201ENST00000507653 PCDHGC4Q9Y5F7 938 aa6.77□□□□□ -1.33
AC008539.1-201ENST00000507653 ELOA3CA0A087WX78 387 aaPredicted RBP6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 ELOA3DA6NLF2 546 aaPredicted RBP6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 CD33P20138 364 aa6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 CD97P48960 835 aa6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 NRG1Q02297 640 aaPredicted RBP6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 ELOA3BQ3SY89 546 aa6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 C4orf17Q53FE4 359 aa6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 ZNF468Q5VIY5 522 aaPredicted RBP6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 ELOA3Q8NG57 546 aa6.76□□□□□ -1.33
AC008539.1-201ENST00000507653 NID1P14543 1247 aa6.75□□□□□ -1.33
AC008539.1-201ENST00000507653 EIF4G2P78344 907 aaKnown RBP eCLIP6.75□□□□□ -1.33
AC008539.1-201ENST00000507653 FIGNL1Q6PIW4 674 aa6.75□□□□□ -1.33
AC008539.1-201ENST00000507653 PRDM6Q9NQX0 595 aa6.75□□□□□ -1.33
AC008539.1-201ENST00000507653 PCDHB11Q9Y5F2 797 aa6.75□□□□□ -1.33
AC008539.1-201ENST00000507653 M0R082 166 aa6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 GP2P55259 537 aaKnown RBP6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 CENPCQ03188 943 aa6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 C8orf86Q6ZUL3 223 aa6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 ZNF417Q8TAU3 575 aa6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 SIRT1Q96EB6 747 aa6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 ZNF587Q96SQ5 575 aaPredicted RBP6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 RAB6BQ9NRW1 208 aa6.74□□□□□ -1.33
AC008539.1-201ENST00000507653 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 GNRH1P01148 92 aa6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 MAPTP10636 758 aaKnown RBP6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 SCTRP47872 440 aa6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 TNP2Q05952 138 aa6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 WASHC4Q2M389 1173 aa6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 LENG1Q96BZ8 264 aaPredicted RBP6.73□□□□□ -1.33
AC008539.1-201ENST00000507653 DCDC2BA2VCK2 349 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 TRAK2O60296 914 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 IL2RAP01589 272 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 SOX11P35716 441 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 ESCO1Q5FWF5 840 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 SHISA2Q6UWI4 295 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 CNKSR1Q969H4 720 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 ZSCAN10Q96SZ4 725 aaPredicted RBP6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 ESYT1Q9BSJ8 1104 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 OSBPL3Q9H4L5 887 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 STARD13Q9Y3M8 1113 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 HRH3Q9Y5N1 445 aa6.72□□□□□ -1.33
AC008539.1-201ENST00000507653 ATXN7O15265 892 aaPredicted RBP6.71□□□□□ -1.34
AC008539.1-201ENST00000507653 IRF5Q13568 498 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms