RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 KCNQ4P56696 695 aa25.86■■□□□ 1.73
USP53-203ENST00000507597 CCDC30Q5VVM6 783 aa25.86■■□□□ 1.73
USP53-203ENST00000507597 LINC00116Q8NCU8 138 aa25.86■■□□□ 1.73
USP53-203ENST00000507597 ZNF428Q96B54 188 aa25.86■■□□□ 1.73
USP53-203ENST00000507597 USP16Q9Y5T5 823 aa25.86■■□□□ 1.73
USP53-203ENST00000507597 CRKLP46109 303 aaKnown RBP25.85■■□□□ 1.73
USP53-203ENST00000507597 HDGFL1Q5TGJ6 251 aa25.85■■□□□ 1.73
USP53-203ENST00000507597 C8orf58Q8NAV2 365 aa25.85■■□□□ 1.73
USP53-203ENST00000507597 RTCBQ9Y3I0 505 aaKnown RBP25.85■■□□□ 1.73
USP53-203ENST00000507597 ELL2O00472 640 aaPredicted RBP25.84■■□□□ 1.73
USP53-203ENST00000507597 TFCP2L1Q9NZI6 479 aa25.84■■□□□ 1.73
USP53-203ENST00000507597 CICQ96RK0 1608 aaPredicted RBP25.84■■□□□ 1.73
USP53-203ENST00000507597 SLC15A2Q16348 729 aa25.83■■□□□ 1.73
USP53-203ENST00000507597 STK31Q9BXU1 1019 aa25.83■■□□□ 1.73
USP53-203ENST00000507597 RPS6KA4O75676 772 aa25.82■■□□□ 1.72
USP53-203ENST00000507597 RREB1Q92766 1687 aa25.82■■□□□ 1.72
USP53-203ENST00000507597 A0A087WZG4 1122 aa25.81■■□□□ 1.72
USP53-203ENST00000507597 GNPATO15228 680 aa25.81■■□□□ 1.72
USP53-203ENST00000507597 ADRA2BP18089 450 aa25.81■■□□□ 1.72
USP53-203ENST00000507597 KRT24Q2M2I5 525 aa25.81■■□□□ 1.72
USP53-203ENST00000507597 DBF4Q9UBU7 674 aaPredicted RBP25.81■■□□□ 1.72
USP53-203ENST00000507597 C5P01031 1676 aa25.8■■□□□ 1.72
USP53-203ENST00000507597 PRAMEF22A3QJZ6 481 aa25.8■■□□□ 1.72
USP53-203ENST00000507597 SSFA2P28290 1259 aa25.8■■□□□ 1.72
USP53-203ENST00000507597 IL6STP40189 918 aaPredicted RBP25.8■■□□□ 1.72
USP53-203ENST00000507597 AKT1S1Q96B36 256 aa25.8■■□□□ 1.72
USP53-203ENST00000507597 VAMP4O75379 141 aa25.79■■□□□ 1.72
USP53-203ENST00000507597 CANXP27824 592 aaKnown RBP25.79■■□□□ 1.72
USP53-203ENST00000507597 TRAPPC3LQ5T215 181 aa25.79■■□□□ 1.72
USP53-203ENST00000507597 TSPYL6Q8N831 410 aa25.79■■□□□ 1.72
USP53-203ENST00000507597 TJP1Q07157 1748 aa25.78■■□□□ 1.72
USP53-203ENST00000507597 A1BGP04217 495 aa25.78■■□□□ 1.72
USP53-203ENST00000507597 INTS5Q6P9B9 1019 aaKnown RBP25.78■■□□□ 1.72
USP53-203ENST00000507597 DDX21Q9NR30 783 aaKnown RBP eCLIP25.78■■□□□ 1.722e-8■■■■□ 24.8
USP53-203ENST00000507597 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
USP53-203ENST00000507597 HYPKQ9NX55 129 aa25.77■■□□□ 1.72
USP53-203ENST00000507597 ZBTB1Q9Y2K1 713 aa25.77■■□□□ 1.72
USP53-203ENST00000507597 NECTIN2Q92692 538 aa25.76■■□□□ 1.71
USP53-203ENST00000507597 TAF1LQ8IZX4 1826 aa25.76■■□□□ 1.71
USP53-203ENST00000507597 LAMB4A4D0S4 1761 aa25.75■■□□□ 1.71
USP53-203ENST00000507597 NUP188Q5SRE5 1749 aa25.75■■□□□ 1.71
USP53-203ENST00000507597 COL5A3P25940 1745 aaPredicted RBP25.74■■□□□ 1.71
USP53-203ENST00000507597 RFC4P35249 363 aa25.74■■□□□ 1.71
USP53-203ENST00000507597 ZNF827Q17R98 1081 aa25.74■■□□□ 1.71
USP53-203ENST00000507597 ZNF330Q9Y3S2 320 aaPredicted RBP25.74■■□□□ 1.71
USP53-203ENST00000507597 MSH5O43196 834 aa25.73■■□□□ 1.71
USP53-203ENST00000507597 MYL6BP14649 208 aa25.73■■□□□ 1.71
USP53-203ENST00000507597 EIF5P55010 431 aaKnown RBP25.73■■□□□ 1.71
USP53-203ENST00000507597 ALDH1L2Q3SY69 923 aa25.73■■□□□ 1.71
USP53-203ENST00000507597 ANO8Q9HCE9 1232 aaPredicted RBP25.73■■□□□ 1.71
USP53-203ENST00000507597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.72■■□□□ 1.71
USP53-203ENST00000507597 ARXQ96QS3 562 aa25.72■■□□□ 1.71
USP53-203ENST00000507597 CHPF2Q9P2E5 772 aa25.72■■□□□ 1.71
USP53-203ENST00000507597 ZPR1O75312 459 aa25.71■■□□□ 1.71
USP53-203ENST00000507597 PHF14O94880 888 aa25.71■■□□□ 1.71
USP53-203ENST00000507597 KIF6Q6ZMV9 814 aa25.71■■□□□ 1.71
USP53-203ENST00000507597 SLC4A2P04920 1241 aa25.7■■□□□ 1.7
USP53-203ENST00000507597 SLC16A10Q8TF71 515 aa25.7■■□□□ 1.7
USP53-203ENST00000507597 COL15A1P39059 1388 aa25.69■■□□□ 1.7
USP53-203ENST00000507597 NBPF26B4DH59 902 aa25.69■■□□□ 1.7
USP53-203ENST00000507597 DDX58O95786 925 aaKnown RBP25.69■■□□□ 1.7
USP53-203ENST00000507597 NBPF10Q6P3W6 841 aaKnown RBP25.69■■□□□ 1.7
USP53-203ENST00000507597 NBPF15Q8N660 670 aa25.69■■□□□ 1.7
USP53-203ENST00000507597 DZIP3Q86Y13 1208 aaKnown RBP25.68■■□□□ 1.7
USP53-203ENST00000507597 ARHGEF1Q92888 912 aaKnown RBP25.68■■□□□ 1.7
USP53-203ENST00000507597 R3HDM1Q15032 1099 aaKnown RBP25.67■■□□□ 1.7
USP53-203ENST00000507597 PDIA6Q15084 440 aa25.67■■□□□ 1.7
USP53-203ENST00000507597 ZNF652Q9Y2D9 606 aa25.67■■□□□ 1.7
USP53-203ENST00000507597 RGL2O15211 777 aa25.66■■□□□ 1.7
USP53-203ENST00000507597 PIP4K2AP48426 406 aaPredicted RBP25.66■■□□□ 1.7
USP53-203ENST00000507597 NARFQ9UHQ1 456 aa25.66■■□□□ 1.7
USP53-203ENST00000507597 PNPLA7Q6ZV29 1317 aa25.65■■□□□ 1.7
USP53-203ENST00000507597 COPS6Q7L5N1 327 aa25.65■■□□□ 1.7
USP53-203ENST00000507597 COL23A1Q86Y22 540 aaPredicted RBP25.65■■□□□ 1.7
USP53-203ENST00000507597 SMC4Q9NTJ3 1288 aa25.65■■□□□ 1.7
USP53-203ENST00000507597 ERVV-1B6SEH8 477 aa25.64■■□□□ 1.7
USP53-203ENST00000507597 AIMP1Q12904 312 aaKnown RBP25.64■■□□□ 1.7
USP53-203ENST00000507597 MYH14Q7Z406 1995 aaKnown RBP25.64■■□□□ 1.69
USP53-203ENST00000507597 RARSP54136 660 aaKnown RBP25.63■■□□□ 1.69
USP53-203ENST00000507597 XAGE3Q8WTP9 111 aa25.63■■□□□ 1.69
USP53-203ENST00000507597 TCERG1O14776 1098 aaKnown RBP25.62■■□□□ 1.69
USP53-203ENST00000507597 ANXA1P04083 346 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 PROSER3Q2NL68 480 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 CLEC4GQ6UXB4 293 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 ANKRD13DQ6ZTN6 518 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 NLGN1Q8N2Q7 840 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 SSH1Q8WYL5 1049 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 TBC1D2BQ9UPU7 963 aa25.62■■□□□ 1.69
USP53-203ENST00000507597 QSER1Q2KHR3 1735 aa25.61■■□□□ 1.69
USP53-203ENST00000507597 BRPF1P55201 1214 aaPredicted RBP25.61■■□□□ 1.69
USP53-203ENST00000507597 FLIIQ13045 1269 aa25.61■■□□□ 1.69
USP53-203ENST00000507597 HSP90AB3PQ58FF7 597 aa25.61■■□□□ 1.69
USP53-203ENST00000507597 UBR3Q6ZT12 1888 aa25.61■■□□□ 1.69
USP53-203ENST00000507597 MAP3K15Q6ZN16 1313 aa25.61■■□□□ 1.69
USP53-203ENST00000507597 KIF16BQ96L93 1317 aa25.61■■□□□ 1.69
USP53-203ENST00000507597 USP42Q9H9J4 1324 aaKnown RBP25.61■■□□□ 1.69
USP53-203ENST00000507597 IPO8O15397 1037 aaKnown RBP25.6■■□□□ 1.69
USP53-203ENST00000507597 LRP10Q7Z4F1 713 aa25.6■■□□□ 1.69
USP53-203ENST00000507597 RIC3Q7Z5B4 369 aa25.6■■□□□ 1.69
USP53-203ENST00000507597 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms