RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 MKRN3Q13064 507 aaKnown RBP14.3□□□□□ -0.12
PDGFRA-205ENST00000507536 SMARCC1Q92922 1105 aaPredicted RBP14.3□□□□□ -0.12
PDGFRA-205ENST00000507536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDGFRA-205ENST00000507536 CD2APQ9Y5K6 639 aa14.3□□□□□ -0.12
PDGFRA-205ENST00000507536 ADCY9O60503 1353 aa14.3□□□□□ -0.12
PDGFRA-205ENST00000507536 PLEKHG2Q9H7P9 1386 aa14.3□□□□□ -0.12
PDGFRA-205ENST00000507536 LOC102724428A0A0B4J2F2 783 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 PHKG2P15735 406 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 SIK1P57059 783 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 ITPK1Q13572 414 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 EIF4A2Q14240 407 aaKnown RBP14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 FLAD1Q8NFF5 587 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 OCEL1Q9H607 264 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 ASAP1Q9ULH1 1129 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 SPG7Q9UQ90 795 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 ARFGEF1Q9Y6D6 1849 aa14.29□□□□□ -0.12
PDGFRA-205ENST00000507536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
PDGFRA-205ENST00000507536 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
PDGFRA-205ENST00000507536 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
PDGFRA-205ENST00000507536 AK7Q96M32 723 aa14.28□□□□□ -0.12
PDGFRA-205ENST00000507536 ATP10DQ9P241 1426 aa14.28□□□□□ -0.12
PDGFRA-205ENST00000507536 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
PDGFRA-205ENST00000507536 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
PDGFRA-205ENST00000507536 GRIN3BO60391 1043 aa14.27□□□□□ -0.13
PDGFRA-205ENST00000507536 PHF14O94880 888 aa14.27□□□□□ -0.13
PDGFRA-205ENST00000507536 SSFA2P28290 1259 aa14.27□□□□□ -0.13
PDGFRA-205ENST00000507536 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
PDGFRA-205ENST00000507536 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
PDGFRA-205ENST00000507536 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
PDGFRA-205ENST00000507536 SLC4A9Q96Q91 983 aa14.26□□□□□ -0.13
PDGFRA-205ENST00000507536 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
PDGFRA-205ENST00000507536 TMOD3Q9NYL9 352 aa14.26□□□□□ -0.13
PDGFRA-205ENST00000507536 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
PDGFRA-205ENST00000507536 PXDNLA1KZ92 1463 aa14.25□□□□□ -0.13
PDGFRA-205ENST00000507536 HMGB2P26583 209 aaKnown RBP14.24□□□□□ -0.13
PDGFRA-205ENST00000507536 TNNT2P45379 298 aaPredicted RBP14.24□□□□□ -0.13
PDGFRA-205ENST00000507536 AFDNP55196 1824 aaKnown RBP14.23□□□□□ -0.13
PDGFRA-205ENST00000507536 GNPATO15228 680 aa14.23□□□□□ -0.13
PDGFRA-205ENST00000507536 MAMSTRQ6ZN01 415 aa14.23□□□□□ -0.13
PDGFRA-205ENST00000507536 EFCAB3Q8N7B9 438 aa14.23□□□□□ -0.13
PDGFRA-205ENST00000507536 C10orf71Q711Q0 1435 aa14.23□□□□□ -0.13
PDGFRA-205ENST00000507536 SBF1O95248 1867 aa14.23□□□□□ -0.13
PDGFRA-205ENST00000507536 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
PDGFRA-205ENST00000507536 ATP6V1AP38606 617 aa14.22□□□□□ -0.13
PDGFRA-205ENST00000507536 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.13
PDGFRA-205ENST00000507536 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
PDGFRA-205ENST00000507536 PANK3Q9H999 370 aa14.21□□□□□ -0.13
PDGFRA-205ENST00000507536 SCUBE2Q9NQ36 999 aa14.21□□□□□ -0.13
PDGFRA-205ENST00000507536 WWC3Q9ULE0 1092 aa14.21□□□□□ -0.13
PDGFRA-205ENST00000507536 DLEC1Q9Y238 1755 aa14.2□□□□□ -0.14
PDGFRA-205ENST00000507536 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
PDGFRA-205ENST00000507536 SIPA1L3O60292 1781 aaPredicted RBP14.19□□□□□ -0.14
PDGFRA-205ENST00000507536 ERVV-2B6SEH9 535 aa14.19□□□□□ -0.14
PDGFRA-205ENST00000507536 MMP10P09238 476 aa14.19□□□□□ -0.14
PDGFRA-205ENST00000507536 PCNTO95613 3336 aa14.19□□□□□ -0.14
PDGFRA-205ENST00000507536 MRC1P22897 1456 aa14.18□□□□□ -0.14
PDGFRA-205ENST00000507536 NRXN2Q9P2S2 1712 aa14.18□□□□□ -0.14
PDGFRA-205ENST00000507536 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
PDGFRA-205ENST00000507536 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
PDGFRA-205ENST00000507536 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
PDGFRA-205ENST00000507536 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDGFRA-205ENST00000507536 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
PDGFRA-205ENST00000507536 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
PDGFRA-205ENST00000507536 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
PDGFRA-205ENST00000507536 ARHGEF1Q92888 912 aaKnown RBP14.16□□□□□ -0.14
PDGFRA-205ENST00000507536 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
PDGFRA-205ENST00000507536 RTCBQ9Y3I0 505 aaKnown RBP14.16□□□□□ -0.14
PDGFRA-205ENST00000507536 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
PDGFRA-205ENST00000507536 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
PDGFRA-205ENST00000507536 GYS1P13807 737 aa14.15□□□□□ -0.14
PDGFRA-205ENST00000507536 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
PDGFRA-205ENST00000507536 DPY19L2Q6NUT2 758 aa14.15□□□□□ -0.14
PDGFRA-205ENST00000507536 GPBP1L1Q9HC44 474 aaPredicted RBP14.15□□□□□ -0.14
PDGFRA-205ENST00000507536 RPS6KA4O75676 772 aa14.14□□□□□ -0.15
PDGFRA-205ENST00000507536 AMOTQ4VCS5 1084 aa14.14□□□□□ -0.15
PDGFRA-205ENST00000507536 TRAPPC3LQ5T215 181 aa14.14□□□□□ -0.15
PDGFRA-205ENST00000507536 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
PDGFRA-205ENST00000507536 STK24Q9Y6E0 443 aa14.14□□□□□ -0.15
PDGFRA-205ENST00000507536 ANKRD31Q8N7Z5 1873 aa14.13□□□□□ -0.15
PDGFRA-205ENST00000507536 STK25O00506 426 aa14.13□□□□□ -0.15
PDGFRA-205ENST00000507536 IL13P35225 146 aa14.13□□□□□ -0.15
PDGFRA-205ENST00000507536 WDR90Q96KV7 1748 aa14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 KIF3CO14782 793 aa14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 CABP4P57796 275 aa14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 SULT6B1Q6IMI4 303 aa14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 MORC1Q86VD1 984 aa14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 NLGN1Q8N2Q7 840 aa14.12□□□□□ -0.15
PDGFRA-205ENST00000507536 SCN7AQ01118 1682 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 TNRC6CQ9HCJ0 1690 aaKnown RBP14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 A0A0G2JLW4 131 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 KCNA3P22001 575 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 MTHFSP49914 203 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 TGFB2P61812 414 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 TIAM2Q8IVF5 1701 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 NFATC2IPQ8NCF5 419 aa14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 COL3A1P02461 1466 aaPredicted RBP14.11□□□□□ -0.15
PDGFRA-205ENST00000507536 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms