RNA–Protein interactions for RNA: ENST00000507468.5

AFF1-206, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 1 (best)

Gene AFF1, Length 1,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-206ENST00000507468 RREB1Q92766 1687 aa27.07■■□□□ 1.92
AFF1-206ENST00000507468 A1BGP04217 495 aa27.06■■□□□ 1.92
AFF1-206ENST00000507468 CRKLP46109 303 aaKnown RBP27.06■■□□□ 1.92
AFF1-206ENST00000507468 HDGFL1Q5TGJ6 251 aa27.06■■□□□ 1.92
AFF1-206ENST00000507468 NECTIN2Q92692 538 aa27.06■■□□□ 1.92
AFF1-206ENST00000507468 COL5A3P25940 1745 aaPredicted RBP27.06■■□□□ 1.92
AFF1-206ENST00000507468 INTS5Q6P9B9 1019 aaKnown RBP27.06■■□□□ 1.92
AFF1-206ENST00000507468 LAMB4A4D0S4 1761 aa27.05■■□□□ 1.92
AFF1-206ENST00000507468 CNTNAP4Q9C0A0 1308 aa27.05■■□□□ 1.92
AFF1-206ENST00000507468 HMGB2P26583 209 aaKnown RBP27.04■■□□□ 1.92
AFF1-206ENST00000507468 RC3H1Q5TC82 1133 aaKnown RBP27.04■■□□□ 1.92
AFF1-206ENST00000507468 CCDC87Q9NVE4 849 aa27.04■■□□□ 1.92
AFF1-206ENST00000507468 ZBTB1Q9Y2K1 713 aa27.03■■□□□ 1.92
AFF1-206ENST00000507468 C4BP0C0L5 1744 aa27.03■■□□□ 1.92
AFF1-206ENST00000507468 NUP188Q5SRE5 1749 aa27.03■■□□□ 1.92
AFF1-206ENST00000507468 CT47B1P0C2W7 299 aaPredicted RBP27.02■■□□□ 1.92
AFF1-206ENST00000507468 PIP4K2AP48426 406 aaPredicted RBP27.02■■□□□ 1.92
AFF1-206ENST00000507468 MYH14Q7Z406 1995 aaKnown RBP27.01■■□□□ 1.92
AFF1-206ENST00000507468 NBPF26B4DH59 902 aa27.01■■□□□ 1.91
AFF1-206ENST00000507468 PDIA6Q15084 440 aa27.01■■□□□ 1.91
AFF1-206ENST00000507468 NBPF14Q5TI25 921 aa27.01■■□□□ 1.91
AFF1-206ENST00000507468 CCDC30Q5VVM6 783 aa27.01■■□□□ 1.91
AFF1-206ENST00000507468 NBPF10Q6P3W6 841 aaKnown RBP27.01■■□□□ 1.91
AFF1-206ENST00000507468 NBPF15Q8N660 670 aa27.01■■□□□ 1.91
AFF1-206ENST00000507468 AKT1S1Q96B36 256 aa27.01■■□□□ 1.91
AFF1-206ENST00000507468 SOCS7O14512 581 aa27■■□□□ 1.91
AFF1-206ENST00000507468 TCERG1O14776 1098 aaKnown RBP27■■□□□ 1.91
AFF1-206ENST00000507468 CANXP27824 592 aaKnown RBP27■■□□□ 1.91
AFF1-206ENST00000507468 ZNF827Q17R98 1081 aa27■■□□□ 1.91
AFF1-206ENST00000507468 CHMP4AQ9BY43 222 aa27■■□□□ 1.91
AFF1-206ENST00000507468 ANO8Q9HCE9 1232 aaPredicted RBP27■■□□□ 1.91
AFF1-206ENST00000507468 CHPF2Q9P2E5 772 aa27■■□□□ 1.91
AFF1-206ENST00000507468 ERBB4Q15303 1308 aa27■■□□□ 1.91
AFF1-206ENST00000507468 AK7Q96M32 723 aa27■■□□□ 1.91
AFF1-206ENST00000507468 GNPATO15228 680 aa26.98■■□□□ 1.91
AFF1-206ENST00000507468 ANXA1P04083 346 aa26.98■■□□□ 1.91
AFF1-206ENST00000507468 PROSER3Q2NL68 480 aa26.98■■□□□ 1.91
AFF1-206ENST00000507468 ZNF428Q96B54 188 aa26.98■■□□□ 1.91
AFF1-206ENST00000507468 DDX21Q9NR30 783 aaKnown RBP eCLIP26.98■■□□□ 1.91
AFF1-206ENST00000507468 DBF4Q9UBU7 674 aaPredicted RBP26.98■■□□□ 1.91
AFF1-206ENST00000507468 RPS6KA4O75676 772 aa26.97■■□□□ 1.91
AFF1-206ENST00000507468 MYL6BP14649 208 aa26.97■■□□□ 1.91
AFF1-206ENST00000507468 AMIGO3Q86WK7 504 aa26.97■■□□□ 1.91
AFF1-206ENST00000507468 SMIM5Q71RC9 77 aa26.96■■□□□ 1.91
AFF1-206ENST00000507468 LRP10Q7Z4F1 713 aa26.96■■□□□ 1.91
AFF1-206ENST00000507468 IL6STP40189 918 aaPredicted RBP26.95■■□□□ 1.91
AFF1-206ENST00000507468 EIF5P55010 431 aaKnown RBP26.95■■□□□ 1.91
AFF1-206ENST00000507468 SLC15A2Q16348 729 aa26.95■■□□□ 1.91
AFF1-206ENST00000507468 STK31Q9BXU1 1019 aa26.95■■□□□ 1.91
AFF1-206ENST00000507468 STK32BQ9NY57 414 aa26.95■■□□□ 1.91
AFF1-206ENST00000507468 RTCBQ9Y3I0 505 aaKnown RBP26.95■■□□□ 1.91
AFF1-206ENST00000507468 RARSP54136 660 aaKnown RBP26.94■■□□□ 1.9
AFF1-206ENST00000507468 SSH1Q8WYL5 1049 aa26.94■■□□□ 1.9
AFF1-206ENST00000507468 SLC4A2P04920 1241 aa26.93■■□□□ 1.9
AFF1-206ENST00000507468 TFCP2L1Q9NZI6 479 aa26.93■■□□□ 1.9
AFF1-206ENST00000507468 ALDH1L2Q3SY69 923 aa26.93■■□□□ 1.9
AFF1-206ENST00000507468 BCL2L13Q9BXK5 485 aa26.93■■□□□ 1.9
AFF1-206ENST00000507468 ZNF330Q9Y3S2 320 aaPredicted RBP26.93■■□□□ 1.9
AFF1-206ENST00000507468 HYPKQ9NX55 129 aa26.92■■□□□ 1.9
AFF1-206ENST00000507468 UBR3Q6ZT12 1888 aa26.91■■□□□ 1.9
AFF1-206ENST00000507468 PHF14O94880 888 aa26.91■■□□□ 1.9
AFF1-206ENST00000507468 MRPL50Q8N5N7 158 aaKnown RBP26.91■■□□□ 1.9
AFF1-206ENST00000507468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.9■■□□□ 1.9
AFF1-206ENST00000507468 SSFA2P28290 1259 aa26.9■■□□□ 1.9
AFF1-206ENST00000507468 PHAXQ9H814 394 aaKnown RBP26.9■■□□□ 1.9
AFF1-206ENST00000507468 COL15A1P39059 1388 aa26.89■■□□□ 1.9
AFF1-206ENST00000507468 G2E3Q7L622 706 aa26.89■■□□□ 1.9
AFF1-206ENST00000507468 SMC4Q9NTJ3 1288 aa26.89■■□□□ 1.9
AFF1-206ENST00000507468 TRAPPC3LQ5T215 181 aa26.88■■□□□ 1.89
AFF1-206ENST00000507468 ARHGEF1Q92888 912 aaKnown RBP26.88■■□□□ 1.89
AFF1-206ENST00000507468 PNPLA7Q6ZV29 1317 aa26.88■■□□□ 1.89
AFF1-206ENST00000507468 ADRA2BP18089 450 aa26.87■■□□□ 1.89
AFF1-206ENST00000507468 COPS6Q7L5N1 327 aa26.87■■□□□ 1.89
AFF1-206ENST00000507468 XAGE3Q8WTP9 111 aa26.87■■□□□ 1.89
AFF1-206ENST00000507468 RCAN3Q9UKA8 241 aa26.87■■□□□ 1.89
AFF1-206ENST00000507468 BCAR3O75815 825 aa26.87■■□□□ 1.89
AFF1-206ENST00000507468 AIMP1Q12904 312 aaKnown RBP26.87■■□□□ 1.89
AFF1-206ENST00000507468 TTLL7Q6ZT98 887 aa26.87■■□□□ 1.89
AFF1-206ENST00000507468 NPM2Q86SE8 214 aaKnown RBP26.87■■□□□ 1.89
AFF1-206ENST00000507468 TUBGCP6Q96RT7 1819 aa26.86■■□□□ 1.89
AFF1-206ENST00000507468 COL23A1Q86Y22 540 aaPredicted RBP26.86■■□□□ 1.89
AFF1-206ENST00000507468 TBC1D2BQ9UPU7 963 aa26.86■■□□□ 1.89
AFF1-206ENST00000507468 A0A087WZG4 1122 aa26.85■■□□□ 1.89
AFF1-206ENST00000507468 DZIP3Q86Y13 1208 aaKnown RBP26.85■■□□□ 1.89
AFF1-206ENST00000507468 FLAD1Q8NFF5 587 aa26.85■■□□□ 1.89
AFF1-206ENST00000507468 ARXQ96QS3 562 aa26.85■■□□□ 1.89
AFF1-206ENST00000507468 BRPF1P55201 1214 aaPredicted RBP26.84■■□□□ 1.89
AFF1-206ENST00000507468 FLIIQ13045 1269 aa26.84■■□□□ 1.89
AFF1-206ENST00000507468 CACNA1FO60840 1977 aa26.82■■□□□ 1.88
AFF1-206ENST00000507468 RFC4P35249 363 aa26.82■■□□□ 1.88
AFF1-206ENST00000507468 R3HDM1Q15032 1099 aaKnown RBP26.82■■□□□ 1.88
AFF1-206ENST00000507468 SRP68Q9UHB9 627 aaKnown RBP26.81■■□□□ 1.88
AFF1-206ENST00000507468 NARFQ9UHQ1 456 aa26.81■■□□□ 1.88
AFF1-206ENST00000507468 QSER1Q2KHR3 1735 aa26.81■■□□□ 1.88
AFF1-206ENST00000507468 KIF6Q6ZMV9 814 aa26.81■■□□□ 1.88
AFF1-206ENST00000507468 PDGFDQ9GZP0 370 aaPredicted RBP26.81■■□□□ 1.88
AFF1-206ENST00000507468 MAP3K15Q6ZN16 1313 aa26.8■■□□□ 1.88
AFF1-206ENST00000507468 MSH5O43196 834 aa26.8■■□□□ 1.88
AFF1-206ENST00000507468 CAMTA2O94983 1202 aa26.8■■□□□ 1.88
AFF1-206ENST00000507468 ZBTB3Q9H5J0 574 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms