RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.639e-25■■□□□ 12.2
RACK1-216ENST00000507273 RFC4P35249 363 aa11.13□□□□□ -0.63
RACK1-216ENST00000507273 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
RACK1-216ENST00000507273 BCORQ6W2J9 1755 aa11.13□□□□□ -0.63
RACK1-216ENST00000507273 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
RACK1-216ENST00000507273 FKBP8Q14318 412 aa11.12□□□□□ -0.63
RACK1-216ENST00000507273 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
RACK1-216ENST00000507273 TTC5Q8N0Z6 440 aa11.12□□□□□ -0.63
RACK1-216ENST00000507273 NLGN1Q8N2Q7 840 aa11.12□□□□□ -0.63
RACK1-216ENST00000507273 BCL2L12Q9HB09 334 aa11.12□□□□□ -0.63
RACK1-216ENST00000507273 COL15A1P39059 1388 aa11.12□□□□□ -0.63
RACK1-216ENST00000507273 PRAMEF22A3QJZ6 481 aa11.11□□□□□ -0.63
RACK1-216ENST00000507273 DDR1Q08345 913 aa11.11□□□□□ -0.63
RACK1-216ENST00000507273 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
RACK1-216ENST00000507273 PXDNLA1KZ92 1463 aa11.11□□□□□ -0.63
RACK1-216ENST00000507273 DCAF8L1A6NGE4 600 aa11.1□□□□□ -0.63
RACK1-216ENST00000507273 YY1P25490 414 aa11.1□□□□□ -0.63
RACK1-216ENST00000507273 TM4SF1P30408 202 aa11.1□□□□□ -0.63
RACK1-216ENST00000507273 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
RACK1-216ENST00000507273 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
RACK1-216ENST00000507273 FMNL2Q96PY5 1086 aa11.1□□□□□ -0.63
RACK1-216ENST00000507273 THUMPD2Q9BTF0 503 aaKnown RBP11.1□□□□□ -0.63
RACK1-216ENST00000507273 STARD3NLO95772 234 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 A1BGP04217 495 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
RACK1-216ENST00000507273 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
RACK1-216ENST00000507273 GPR162Q16538 588 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 MIS18AQ9NYP9 233 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 ARFGEF1Q9Y6D6 1849 aa11.09□□□□□ -0.63
RACK1-216ENST00000507273 ANKRD31Q8N7Z5 1873 aa11.08□□□□□ -0.64
RACK1-216ENST00000507273 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
RACK1-216ENST00000507273 POLRMTO00411 1230 aaKnown RBP11.08□□□□□ -0.64
RACK1-216ENST00000507273 TEX13AQ9BXU3 409 aaPredicted RBP11.08□□□□□ -0.64
RACK1-216ENST00000507273 IL6STP40189 918 aaPredicted RBP11.07□□□□□ -0.64
RACK1-216ENST00000507273 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
RACK1-216ENST00000507273 NFIXQ14938 502 aa11.07□□□□□ -0.64
RACK1-216ENST00000507273 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
RACK1-216ENST00000507273 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
RACK1-216ENST00000507273 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
RACK1-216ENST00000507273 MAPK8IP3Q9UPT6 1336 aa11.07□□□□□ -0.64
RACK1-216ENST00000507273 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 ZPR1O75312 459 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 SNRPA1P09661 255 aaKnown RBP11.06□□□□□ -0.64
RACK1-216ENST00000507273 KCNA3P22001 575 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
RACK1-216ENST00000507273 TGFB2P61812 414 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
RACK1-216ENST00000507273 CCDC146Q8IYE0 955 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
RACK1-216ENST00000507273 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 CAMTA2O94983 1202 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 NEFMP07197 916 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 RIPK4P57078 832 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 EIF4A1P60842 406 aaKnown RBP11.05□□□□□ -0.64
RACK1-216ENST00000507273 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
RACK1-216ENST00000507273 NUP98P52948 1817 aa11.05□□□□□ -0.64
RACK1-216ENST00000507273 CARMIL3Q8ND23 1372 aa11.04□□□□□ -0.64
RACK1-216ENST00000507273 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
RACK1-216ENST00000507273 A0A087WZG4 1122 aa11.04□□□□□ -0.64
RACK1-216ENST00000507273 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
RACK1-216ENST00000507273 GIGYF1O75420 1035 aaPredicted RBP11.04□□□□□ -0.64
RACK1-216ENST00000507273 DPEP1P16444 411 aa11.04□□□□□ -0.64
RACK1-216ENST00000507273 TBC1D9BQ66K14 1250 aa11.04□□□□□ -0.64
RACK1-216ENST00000507273 RUNDC1Q96C34 613 aa11.04□□□□□ -0.64
RACK1-216ENST00000507273 ZNF784Q8NCA9 323 aaPredicted RBP11.03□□□□□ -0.64
RACK1-216ENST00000507273 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
RACK1-216ENST00000507273 SBF1O95248 1867 aa11.02□□□□□ -0.64
RACK1-216ENST00000507273 SERPINB2P05120 415 aa11.02□□□□□ -0.65
RACK1-216ENST00000507273 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
RACK1-216ENST00000507273 ADCY9O60503 1353 aa11.02□□□□□ -0.65
RACK1-216ENST00000507273 CHRNA5P30532 468 aa11.01□□□□□ -0.65
RACK1-216ENST00000507273 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
RACK1-216ENST00000507273 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
RACK1-216ENST00000507273 CACNA1SQ13698 1873 aa11.01□□□□□ -0.65
RACK1-216ENST00000507273 NEUROD2Q15784 382 aa11□□□□□ -0.65
RACK1-216ENST00000507273 BICDL1Q6ZP65 573 aa11□□□□□ -0.65
RACK1-216ENST00000507273 LRP10Q7Z4F1 713 aa11□□□□□ -0.65
RACK1-216ENST00000507273 BABAM1Q9NWV8 329 aa11□□□□□ -0.65
RACK1-216ENST00000507273 TSPYL4Q9UJ04 414 aa11□□□□□ -0.65
RACK1-216ENST00000507273 ARFGEF2Q9Y6D5 1785 aa11□□□□□ -0.65
RACK1-216ENST00000507273 CHL1O00533 1208 aa10.99□□□□□ -0.65
RACK1-216ENST00000507273 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
RACK1-216ENST00000507273 PDIA6Q15084 440 aa10.99□□□□□ -0.65
RACK1-216ENST00000507273 HLFQ16534 295 aa10.99□□□□□ -0.65
RACK1-216ENST00000507273 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
RACK1-216ENST00000507273 BCS1LQ9Y276 419 aa10.99□□□□□ -0.65
RACK1-216ENST00000507273 TNRC6CQ9HCJ0 1690 aaKnown RBP10.98□□□□□ -0.65
RACK1-216ENST00000507273 CCDC88AQ3V6T2 1871 aa10.98□□□□□ -0.65
RACK1-216ENST00000507273 KRT24Q2M2I5 525 aa10.98□□□□□ -0.65
RACK1-216ENST00000507273 CLEC4GQ6UXB4 293 aa10.98□□□□□ -0.65
RACK1-216ENST00000507273 TTLL7Q6ZT98 887 aa10.98□□□□□ -0.65
RACK1-216ENST00000507273 CCDC24Q8N4L8 307 aa10.98□□□□□ -0.65
RACK1-216ENST00000507273 PIM2Q9P1W9 311 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms