RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TRAPPC3LQ5T215 181 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 IFNL2Q8IZJ0 200 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 EYA1Q99502 592 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 CARD14Q9BXL6 1004 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 SCUBE2Q9NQ36 999 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 CCDC87Q9NVE4 849 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 RTCBQ9Y3I0 505 aaKnown RBP7.99□□□□□ -1.13
GYPB-208ENST00000507009 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 KIAA1551Q9HCM1 1747 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 TOMM70O94826 608 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 RFC4P35249 363 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 NKX1-1Q15270 411 aaPredicted RBP7.98□□□□□ -1.13
GYPB-208ENST00000507009 C9orf131Q5VYM1 1079 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 TMEM106CQ9BVX2 250 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
GYPB-208ENST00000507009 C4AP0C0L4 1744 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 WDR90Q96KV7 1748 aa7.98□□□□□ -1.13
GYPB-208ENST00000507009 KIF13BQ9NQT8 1826 aa7.97□□□□□ -1.13
GYPB-208ENST00000507009 PTCD1O75127 700 aaKnown RBP7.97□□□□□ -1.13
GYPB-208ENST00000507009 TGFB2P61812 414 aa7.97□□□□□ -1.13
GYPB-208ENST00000507009 CDCA8Q53HL2 280 aa7.97□□□□□ -1.13
GYPB-208ENST00000507009 NLGN1Q8N2Q7 840 aa7.97□□□□□ -1.13
GYPB-208ENST00000507009 ARHGEF1Q92888 912 aaKnown RBP7.97□□□□□ -1.13
GYPB-208ENST00000507009 RNF181Q9P0P0 153 aa7.97□□□□□ -1.13
GYPB-208ENST00000507009 KIF24Q5T7B8 1368 aa7.97□□□□□ -1.13
GYPB-208ENST00000507009 C10orf71Q711Q0 1435 aa7.96□□□□□ -1.13
GYPB-208ENST00000507009 GYS1P13807 737 aa7.96□□□□□ -1.14
GYPB-208ENST00000507009 CABP4P57796 275 aa7.96□□□□□ -1.14
GYPB-208ENST00000507009 IER5LQ5T953 404 aa7.96□□□□□ -1.14
GYPB-208ENST00000507009 RRAGCQ9HB90 399 aa7.96□□□□□ -1.14
GYPB-208ENST00000507009 SRP68Q9UHB9 627 aaKnown RBP7.96□□□□□ -1.14
GYPB-208ENST00000507009 KCPQ6ZWJ8 1503 aa7.96□□□□□ -1.14
GYPB-208ENST00000507009 ANKRD26Q9UPS8 1709 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 CHRNA5P30532 468 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
GYPB-208ENST00000507009 ZNF530Q6P9A1 599 aaPredicted RBP7.95□□□□□ -1.14
GYPB-208ENST00000507009 DNAJC5GQ8N7S2 189 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 POLKQ9UBT6 870 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 COL5A3P25940 1745 aaPredicted RBP7.95□□□□□ -1.14
GYPB-208ENST00000507009 NCAPD2Q15021 1401 aa7.95□□□□□ -1.14
GYPB-208ENST00000507009 BRCA1P38398 1863 aaKnown RBP7.94□□□□□ -1.14
GYPB-208ENST00000507009 RPS6KA4O75676 772 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 GSE1Q14687 1217 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 DALRD3Q5D0E6 543 aaKnown RBP7.94□□□□□ -1.14
GYPB-208ENST00000507009 COL13A1Q5TAT6 717 aaPredicted RBP7.94□□□□□ -1.14
GYPB-208ENST00000507009 RBM46Q8TBY0 533 aaKnown RBP7.94□□□□□ -1.14
GYPB-208ENST00000507009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.94□□□□□ -1.14
GYPB-208ENST00000507009 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 PCDHB8Q9UN66 801 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 KDRP35968 1356 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
GYPB-208ENST00000507009 POTEMA6NI47 508 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 KCNA3P22001 575 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 CRKLP46109 303 aaKnown RBP7.93□□□□□ -1.14
GYPB-208ENST00000507009 MTHFSP49914 203 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 RASSF7Q02833 373 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 PLEKHO1Q53GL0 409 aaPredicted RBP7.93□□□□□ -1.14
GYPB-208ENST00000507009 C1orf141Q5JVX7 400 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 CNTNAP4Q9C0A0 1308 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 PLEKHG2Q9H7P9 1386 aa7.93□□□□□ -1.14
GYPB-208ENST00000507009 MYH14Q7Z406 1995 aaKnown RBP7.93□□□□□ -1.14
GYPB-208ENST00000507009 ERVV-2B6SEH9 535 aa7.92□□□□□ -1.14
GYPB-208ENST00000507009 HSP90AB1P08238 724 aaKnown RBP7.92□□□□□ -1.14
GYPB-208ENST00000507009 DDR1Q08345 913 aa7.92□□□□□ -1.14
GYPB-208ENST00000507009 RC3H1Q5TC82 1133 aaKnown RBP7.92□□□□□ -1.14
GYPB-208ENST00000507009 TNS4Q8IZW8 715 aa7.92□□□□□ -1.14
GYPB-208ENST00000507009 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
GYPB-208ENST00000507009 KDM6AO15550 1401 aaPredicted RBP7.92□□□□□ -1.14
GYPB-208ENST00000507009 TNRC6CQ9HCJ0 1690 aaKnown RBP7.92□□□□□ -1.14
GYPB-208ENST00000507009 ZPR1O75312 459 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 FSTL1Q12841 308 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 POTEGQ6S5H5 508 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 AEBP1Q8IUX7 1158 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 USP42Q9H9J4 1324 aaKnown RBP7.91□□□□□ -1.14
GYPB-208ENST00000507009 TJP1Q07157 1748 aa7.91□□□□□ -1.14
GYPB-208ENST00000507009 SBF1O95248 1867 aa7.9□□□□□ -1.14
GYPB-208ENST00000507009 ZNF831Q5JPB2 1677 aa7.9□□□□□ -1.14
GYPB-208ENST00000507009 PLCG2P16885 1265 aa7.9□□□□□ -1.14
GYPB-208ENST00000507009 SMC1BQ8NDV3 1235 aa7.9□□□□□ -1.14
GYPB-208ENST00000507009 POLRMTO00411 1230 aaKnown RBP7.89□□□□□ -1.15
GYPB-208ENST00000507009 HSPA1AP0DMV8 641 aaKnown RBP7.89□□□□□ -1.15
GYPB-208ENST00000507009 HSPA1BP0DMV9 641 aaKnown RBP7.89□□□□□ -1.15
GYPB-208ENST00000507009 AMOTQ4VCS5 1084 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 SULT6B1Q6IMI4 303 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 BICDL1Q6ZP65 573 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 DNAJC10Q8IXB1 793 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 FAM163AQ96GL9 167 aaPredicted RBP7.89□□□□□ -1.15
GYPB-208ENST00000507009 PLSCR2Q9NRY7 297 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 CCDC88AQ3V6T2 1871 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
GYPB-208ENST00000507009 AFDNP55196 1824 aaKnown RBP7.88□□□□□ -1.15
GYPB-208ENST00000507009 IRX5P78411 483 aaPredicted RBP7.88□□□□□ -1.15
GYPB-208ENST00000507009 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms