RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 ATXN7L1Q9ULK2 861 aaPredicted RBP7.29□□□□□ -1.24
SMAD1-205ENST00000506626 CSB-PGBD3P0DP91 1061 aa7.28□□□□□ -1.24
SMAD1-205ENST00000506626 BMP4P12644 408 aa7.28□□□□□ -1.24
SMAD1-205ENST00000506626 RSPO4Q2I0M5 234 aaPredicted RBP7.28□□□□□ -1.24
SMAD1-205ENST00000506626 WASHC4Q2M389 1173 aa7.28□□□□□ -1.24
SMAD1-205ENST00000506626 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
SMAD1-205ENST00000506626 PGBD3Q8N328 593 aa7.28□□□□□ -1.24
SMAD1-205ENST00000506626 RUBCNLQ9H714 662 aa7.28□□□□□ -1.24
SMAD1-205ENST00000506626 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
SMAD1-205ENST00000506626 MSX1P28360 303 aa7.27□□□□□ -1.25
SMAD1-205ENST00000506626 SCNN1DP51172 638 aa7.27□□□□□ -1.25
SMAD1-205ENST00000506626 MCM6Q14566 821 aa7.27□□□□□ -1.25
SMAD1-205ENST00000506626 NKAPLQ5M9Q1 402 aa7.27□□□□□ -1.25
SMAD1-205ENST00000506626 GDF10P55107 478 aa7.26□□□□□ -1.25
SMAD1-205ENST00000506626 EFHC2Q5JST6 749 aa7.26□□□□□ -1.25
SMAD1-205ENST00000506626 PLPP7Q8NBV4 271 aa7.26□□□□□ -1.25
SMAD1-205ENST00000506626 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
SMAD1-205ENST00000506626 BTBD11A6QL63 1104 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 INHAP05111 366 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 ARAFP10398 606 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 FGFR3P22607 806 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 SOX11P35716 441 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 PLA2G4AP47712 749 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 CTBSQ01459 385 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 MAP7D1Q3KQU3 841 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 CRISPLD1Q9H336 500 aa7.25□□□□□ -1.25
SMAD1-205ENST00000506626 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 BNIP3LO60238 219 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 GATA4P43694 442 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 SEMA3FQ13275 785 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
SMAD1-205ENST00000506626 TRIM11Q96F44 468 aa7.23□□□□□ -1.25
SMAD1-205ENST00000506626 ZFP64Q9NPA5 681 aa7.23□□□□□ -1.25
SMAD1-205ENST00000506626 ATP4AP20648 1035 aa7.22□□□□□ -1.25
SMAD1-205ENST00000506626 SMTNP53814 917 aa7.22□□□□□ -1.25
SMAD1-205ENST00000506626 NIFKQ9BYG3 293 aaKnown RBP7.22□□□□□ -1.25
SMAD1-205ENST00000506626 DNAAF2Q9NVR5 837 aaKnown RBP7.22□□□□□ -1.25
SMAD1-205ENST00000506626 NEURL1BA8MQ27 555 aa7.21□□□□□ -1.26
SMAD1-205ENST00000506626 TMEM229AB2RXF0 380 aa7.21□□□□□ -1.26
SMAD1-205ENST00000506626 SPATA31C1P0DKV0 1188 aa7.21□□□□□ -1.26
SMAD1-205ENST00000506626 C1orf216Q8TAB5 229 aa7.21□□□□□ -1.26
SMAD1-205ENST00000506626 TPSG1Q9NRR2 321 aa7.21□□□□□ -1.26
SMAD1-205ENST00000506626 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
SMAD1-205ENST00000506626 PIK3CDO00329 1044 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 DYRK3O43781 588 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 FIGNL1Q6PIW4 674 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 ZNF295-AS1Q8N0V1 137 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 KLF15Q9UIH9 416 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 HCN2Q9UL51 889 aa7.2□□□□□ -1.26
SMAD1-205ENST00000506626 MTFR1Q15390 333 aa7.19□□□□□ -1.26
SMAD1-205ENST00000506626 NLRP8Q86W28 1048 aa7.19□□□□□ -1.26
SMAD1-205ENST00000506626 FCHSD1Q86WN1 690 aa7.19□□□□□ -1.26
SMAD1-205ENST00000506626 SLC4A9Q96Q91 983 aa7.19□□□□□ -1.26
SMAD1-205ENST00000506626 ZCCHC2Q9C0B9 1178 aaKnown RBP7.19□□□□□ -1.26
SMAD1-205ENST00000506626 A6NJY4 79 aa7.18□□□□□ -1.26
SMAD1-205ENST00000506626 EML3Q32P44 896 aa7.18□□□□□ -1.26
SMAD1-205ENST00000506626 AIDAQ96BJ3 306 aa7.18□□□□□ -1.26
SMAD1-205ENST00000506626 IQSEC3Q9UPP2 1182 aaPredicted RBP7.18□□□□□ -1.26
SMAD1-205ENST00000506626 PCDHGC4Q9Y5F7 938 aa7.18□□□□□ -1.26
SMAD1-205ENST00000506626 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
SMAD1-205ENST00000506626 USP3Q9Y6I4 520 aa7.18□□□□□ -1.26
SMAD1-205ENST00000506626 CDK2AP1O14519 115 aa7.17□□□□□ -1.26
SMAD1-205ENST00000506626 SKIP12755 728 aa7.17□□□□□ -1.26
SMAD1-205ENST00000506626 NBPF1Q3BBV0 1214 aa7.17□□□□□ -1.26
SMAD1-205ENST00000506626 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
SMAD1-205ENST00000506626 ALG2Q9H553 416 aa7.17□□□□□ -1.26
SMAD1-205ENST00000506626 A0A1W2PNR3 127 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-205ENST00000506626 ADH6P28332 368 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 GTF2IP78347 998 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 ARSJQ5FYB0 599 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-205ENST00000506626 NFATC2IPQ8NCF5 419 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 GOLGA2P5Q9HBQ8 144 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 AVENQ9NQS1 362 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-205ENST00000506626 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
SMAD1-205ENST00000506626 DCDC2BA2VCK2 349 aa7.15□□□□□ -1.26
SMAD1-205ENST00000506626 MAPTP10636 758 aaKnown RBP7.15□□□□□ -1.26
SMAD1-205ENST00000506626 TATP17735 454 aaPredicted RBP7.15□□□□□ -1.26
SMAD1-205ENST00000506626 PRSS36Q5K4E3 855 aa7.15□□□□□ -1.26
SMAD1-205ENST00000506626 CABP1Q9NZU7 370 aa7.15□□□□□ -1.26
SMAD1-205ENST00000506626 BACH1O14867 736 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 LZTS3O60299 673 aaPredicted RBP7.14□□□□□ -1.27
SMAD1-205ENST00000506626 PRKCSHP14314 528 aaPredicted RBP7.14□□□□□ -1.27
SMAD1-205ENST00000506626 TNP2Q05952 138 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 NCOA4Q13772 614 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 FAM182BQ5T319 152 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 NBPF11Q86T75 865 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 WWC1Q8IX03 1113 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 ZIC5Q96T25 663 aa7.14□□□□□ -1.27
SMAD1-205ENST00000506626 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
SMAD1-205ENST00000506626 CD33P20138 364 aa7.13□□□□□ -1.27
SMAD1-205ENST00000506626 PSME1Q06323 249 aa7.13□□□□□ -1.27
SMAD1-205ENST00000506626 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
SMAD1-205ENST00000506626 SCHIP1Q9P0W5 487 aaPredicted RBP7.13□□□□□ -1.27
SMAD1-205ENST00000506626 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms