RNA–Protein interactions for RNA: ENST00000506262.1

PDS5A-205, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-205ENST00000506262 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
PDS5A-205ENST00000506262 LMOD3Q0VAK6 560 aa17.8■□□□□ 0.44
PDS5A-205ENST00000506262 GPR162Q16538 588 aa17.8■□□□□ 0.44
PDS5A-205ENST00000506262 INTS5Q6P9B9 1019 aaKnown RBP17.8■□□□□ 0.44
PDS5A-205ENST00000506262 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
PDS5A-205ENST00000506262 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
PDS5A-205ENST00000506262 CHD4Q14839 1912 aa17.79■□□□□ 0.44
PDS5A-205ENST00000506262 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
PDS5A-205ENST00000506262 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
PDS5A-205ENST00000506262 USP42Q9H9J4 1324 aaKnown RBP17.78■□□□□ 0.44
PDS5A-205ENST00000506262 ANP32CO43423 234 aa17.78■□□□□ 0.44
PDS5A-205ENST00000506262 RIPK4P57078 832 aa17.78■□□□□ 0.44
PDS5A-205ENST00000506262 NLGN2Q8NFZ4 835 aa17.78■□□□□ 0.44
PDS5A-205ENST00000506262 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
PDS5A-205ENST00000506262 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
PDS5A-205ENST00000506262 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
PDS5A-205ENST00000506262 PARP3Q9Y6F1 533 aa17.78■□□□□ 0.44
PDS5A-205ENST00000506262 KCNQ3O43525 872 aa17.77■□□□□ 0.44
PDS5A-205ENST00000506262 GYS1P13807 737 aa17.77■□□□□ 0.44
PDS5A-205ENST00000506262 NEUROD2Q15784 382 aa17.77■□□□□ 0.44
PDS5A-205ENST00000506262 THUMPD2Q9BTF0 503 aaKnown RBP17.77■□□□□ 0.44
PDS5A-205ENST00000506262 A0A087WZG4 1122 aa17.76■□□□□ 0.43
PDS5A-205ENST00000506262 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
PDS5A-205ENST00000506262 RRP7AQ9Y3A4 280 aaKnown RBP17.76■□□□□ 0.43
PDS5A-205ENST00000506262 SCN7AQ01118 1682 aa17.76■□□□□ 0.43
PDS5A-205ENST00000506262 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
PDS5A-205ENST00000506262 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
PDS5A-205ENST00000506262 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
PDS5A-205ENST00000506262 MIS18AQ9NYP9 233 aa17.75■□□□□ 0.43
PDS5A-205ENST00000506262 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
PDS5A-205ENST00000506262 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
PDS5A-205ENST00000506262 N4BP2Q86UW6 1770 aaPredicted RBP17.74■□□□□ 0.43
PDS5A-205ENST00000506262 GOLGB1Q14789 3259 aaKnown RBP17.73■□□□□ 0.43
PDS5A-205ENST00000506262 FKBP8Q14318 412 aa17.73■□□□□ 0.43
PDS5A-205ENST00000506262 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
PDS5A-205ENST00000506262 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
PDS5A-205ENST00000506262 BCORQ6W2J9 1755 aa17.72■□□□□ 0.43
PDS5A-205ENST00000506262 YY1P25490 414 aa17.72■□□□□ 0.43
PDS5A-205ENST00000506262 AFDNP55196 1824 aaKnown RBP17.72■□□□□ 0.43
PDS5A-205ENST00000506262 A1BGP04217 495 aa17.71■□□□□ 0.43
PDS5A-205ENST00000506262 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-205ENST00000506262 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
PDS5A-205ENST00000506262 EIF5P55010 431 aaKnown RBP17.7■□□□□ 0.42
PDS5A-205ENST00000506262 WWC3Q9ULE0 1092 aa17.7■□□□□ 0.42
PDS5A-205ENST00000506262 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
PDS5A-205ENST00000506262 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
PDS5A-205ENST00000506262 NPHP1O15259 732 aa17.69■□□□□ 0.42
PDS5A-205ENST00000506262 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
PDS5A-205ENST00000506262 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
PDS5A-205ENST00000506262 TBC1D2BQ9UPU7 963 aa17.69■□□□□ 0.42
PDS5A-205ENST00000506262 USP16Q9Y5T5 823 aa17.69■□□□□ 0.42
PDS5A-205ENST00000506262 UTRNP46939 3433 aa17.69■□□□□ 0.42
PDS5A-205ENST00000506262 BICDL1Q6ZP65 573 aa17.68■□□□□ 0.42
PDS5A-205ENST00000506262 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
PDS5A-205ENST00000506262 DDR1Q08345 913 aa17.67■□□□□ 0.42
PDS5A-205ENST00000506262 DZIP3Q86Y13 1208 aaKnown RBP17.67■□□□□ 0.42
PDS5A-205ENST00000506262 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
PDS5A-205ENST00000506262 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
PDS5A-205ENST00000506262 ZNF652Q9Y2D9 606 aa17.66■□□□□ 0.42
PDS5A-205ENST00000506262 PXDNLA1KZ92 1463 aa17.66■□□□□ 0.42
PDS5A-205ENST00000506262 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
PDS5A-205ENST00000506262 POLRMTO00411 1230 aaKnown RBP17.65■□□□□ 0.42
PDS5A-205ENST00000506262 TGFB2P61812 414 aa17.65■□□□□ 0.42
PDS5A-205ENST00000506262 NFIXQ14938 502 aa17.65■□□□□ 0.42
PDS5A-205ENST00000506262 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
PDS5A-205ENST00000506262 APAF1O14727 1248 aa17.64■□□□□ 0.41
PDS5A-205ENST00000506262 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
PDS5A-205ENST00000506262 YBX3P16989 372 aaKnown RBP eCLIP17.64■□□□□ 0.416e-6■□□□□ 10.6
PDS5A-205ENST00000506262 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
PDS5A-205ENST00000506262 CARMIL3Q8ND23 1372 aa17.64■□□□□ 0.41
PDS5A-205ENST00000506262 A0A0G2JLW4 131 aa17.63■□□□□ 0.41
PDS5A-205ENST00000506262 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
PDS5A-205ENST00000506262 NGEFQ8N5V2 710 aa17.63■□□□□ 0.41
PDS5A-205ENST00000506262 SERPINB2P05120 415 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 MYL6BP14649 208 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 TM4SF1P30408 202 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 TBC1D9BQ66K14 1250 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
PDS5A-205ENST00000506262 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
PDS5A-205ENST00000506262 NUP98P52948 1817 aa17.61■□□□□ 0.41
PDS5A-205ENST00000506262 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
PDS5A-205ENST00000506262 CAMTA2O94983 1202 aa17.61■□□□□ 0.41
PDS5A-205ENST00000506262 DPEP1P16444 411 aa17.61■□□□□ 0.41
PDS5A-205ENST00000506262 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
PDS5A-205ENST00000506262 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
PDS5A-205ENST00000506262 NBPF26B4DH59 902 aa17.6■□□□□ 0.41
PDS5A-205ENST00000506262 NBPF10Q6P3W6 841 aaKnown RBP17.6■□□□□ 0.41
PDS5A-205ENST00000506262 NBPF15Q8N660 670 aa17.6■□□□□ 0.41
PDS5A-205ENST00000506262 CACNA1SQ13698 1873 aa17.6■□□□□ 0.41
PDS5A-205ENST00000506262 ERBB4Q15303 1308 aa17.59■□□□□ 0.41
PDS5A-205ENST00000506262 ST5P78524 1137 aa17.59■□□□□ 0.41
PDS5A-205ENST00000506262 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
PDS5A-205ENST00000506262 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.41
PDS5A-205ENST00000506262 NECTIN2Q92692 538 aa17.58■□□□□ 0.4
PDS5A-205ENST00000506262 PIM2Q9P1W9 311 aa17.58■□□□□ 0.4
PDS5A-205ENST00000506262 CHRNA5P30532 468 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms