RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 UPF1Q92900 1129 aaKnown RBP eCLIP7.77□□□□□ -1.16
SCLT1-207ENST00000506233 CRBNQ96SW2 442 aa7.77□□□□□ -1.16
SCLT1-207ENST00000506233 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
SCLT1-207ENST00000506233 REM2Q8IYK8 340 aaPredicted RBP7.77□□□□□ -1.17
SCLT1-207ENST00000506233 PLCH1Q4KWH8 1693 aa7.77□□□□□ -1.17
SCLT1-207ENST00000506233 KIF12Q96FN5 646 aa7.77□□□□□ -1.17
SCLT1-207ENST00000506233 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
SCLT1-207ENST00000506233 FANCIQ9NVI1 1328 aa7.77□□□□□ -1.17
SCLT1-207ENST00000506233 PPP2R2DQ66LE6 453 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 GJD4Q96KN9 370 aaPredicted RBP7.76□□□□□ -1.17
SCLT1-207ENST00000506233 TRPC6Q9Y210 931 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 TCF3P15923 654 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 SCNN1AP37088 669 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 SPATA32Q96LK8 384 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 LTBP4Q8N2S1 1624 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 MRC1P22897 1456 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 TMPOP42166 694 aaKnown RBP7.76□□□□□ -1.17
SCLT1-207ENST00000506233 DPY19L2Q6NUT2 758 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCLT1-207ENST00000506233 RUNDC1Q96C34 613 aa7.76□□□□□ -1.17
SCLT1-207ENST00000506233 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
SCLT1-207ENST00000506233 SALL2Q9Y467 1007 aaPredicted RBP7.76□□□□□ -1.17
SCLT1-207ENST00000506233 LMOD1P29536 600 aaPredicted RBP7.75□□□□□ -1.17
SCLT1-207ENST00000506233 EIF4A2Q14240 407 aaKnown RBP7.75□□□□□ -1.17
SCLT1-207ENST00000506233 CACNA1FO60840 1977 aa7.75□□□□□ -1.17
SCLT1-207ENST00000506233 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
SCLT1-207ENST00000506233 TNNT2P45379 298 aaPredicted RBP7.75□□□□□ -1.17
SCLT1-207ENST00000506233 PDE4CQ08493 712 aa7.75□□□□□ -1.17
SCLT1-207ENST00000506233 LAMB4A4D0S4 1761 aa7.75□□□□□ -1.17
SCLT1-207ENST00000506233 RRS1Q15050 365 aaKnown RBP7.75□□□□□ -1.17
SCLT1-207ENST00000506233 PLPP6Q8IY26 295 aa7.75□□□□□ -1.17
SCLT1-207ENST00000506233 TSPYL6Q8N831 410 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 SLAIN2Q9P270 581 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 ATP10DQ9P241 1426 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 VAC14Q08AM6 782 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 CSPP1Q1MSJ5 1256 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 WDR63Q8IWG1 891 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 HMX1Q9NP08 348 aaPredicted RBP7.74□□□□□ -1.17
SCLT1-207ENST00000506233 PCDHB15Q9Y5E8 787 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 MAP3K19Q56UN5 1328 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 IGSF1Q8N6C5 1336 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 HEG1Q9ULI3 1381 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 PITPNM1O00562 1244 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 ZNF662Q6ZS27 426 aa7.74□□□□□ -1.17
SCLT1-207ENST00000506233 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
SCLT1-207ENST00000506233 C8orf34Q49A92 452 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 MORC1Q86VD1 984 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 TFIP11Q9UBB9 837 aaKnown RBP7.73□□□□□ -1.17
SCLT1-207ENST00000506233 PHLPP1O60346 1717 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 RREB1Q92766 1687 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 GOLGA2Q08379 1002 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 TSR2Q969E8 191 aaKnown RBP7.73□□□□□ -1.17
SCLT1-207ENST00000506233 CICQ96RK0 1608 aaPredicted RBP7.73□□□□□ -1.17
SCLT1-207ENST00000506233 CEMIPQ8WUJ3 1361 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 METTL3Q86U44 580 aaKnown RBP7.73□□□□□ -1.17
SCLT1-207ENST00000506233 STK32AQ8WU08 396 aa7.73□□□□□ -1.17
SCLT1-207ENST00000506233 FAM83GA6ND36 823 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 MAP3K9P80192 1104 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 SIRT2Q8IXJ6 389 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 GIPC2Q8TF65 315 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 ZMIZ1Q9ULJ6 1067 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 ARHGEF10O15013 1369 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 BRD2P25440 801 aaKnown RBP7.72□□□□□ -1.17
SCLT1-207ENST00000506233 PTGER2P43116 358 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 IL16Q14005 1332 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 ITGB4P16144 1822 aa7.72□□□□□ -1.17
SCLT1-207ENST00000506233 KDM4AO75164 1064 aa7.71□□□□□ -1.17
SCLT1-207ENST00000506233 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
SCLT1-207ENST00000506233 THUMPD2Q9BTF0 503 aaKnown RBP7.71□□□□□ -1.18
SCLT1-207ENST00000506233 PPP1R1BQ9UD71 204 aaPredicted RBP7.71□□□□□ -1.18
SCLT1-207ENST00000506233 ARFGEF2Q9Y6D5 1785 aa7.71□□□□□ -1.18
SCLT1-207ENST00000506233 TSR1Q2NL82 804 aaKnown RBP7.71□□□□□ -1.18
SCLT1-207ENST00000506233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.71□□□□□ -1.18
SCLT1-207ENST00000506233 AXIN2Q9Y2T1 843 aa7.71□□□□□ -1.18
SCLT1-207ENST00000506233 DRC1Q96MC2 740 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 SBNO1A3KN83 1393 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 DCCP43146 1447 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 FOXO3O43524 673 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 VAMP4O75379 141 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 RTL5Q5HYW3 569 aaPredicted RBP7.7□□□□□ -1.18
SCLT1-207ENST00000506233 C2orf72A6NCS6 295 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 ILDR1Q86SU0 546 aaPredicted RBP7.7□□□□□ -1.18
SCLT1-207ENST00000506233 SREK1Q8WXA9 508 aaKnown RBP7.7□□□□□ -1.18
SCLT1-207ENST00000506233 BCL2L13Q9BXK5 485 aa7.7□□□□□ -1.18
SCLT1-207ENST00000506233 DDX60Q8IY21 1712 aaKnown RBP7.69□□□□□ -1.18
SCLT1-207ENST00000506233 KRT24Q2M2I5 525 aa7.69□□□□□ -1.18
SCLT1-207ENST00000506233 CERS3Q8IU89 383 aa7.69□□□□□ -1.18
SCLT1-207ENST00000506233 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
SCLT1-207ENST00000506233 SLIT2O94813 1529 aa7.69□□□□□ -1.18
SCLT1-207ENST00000506233 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
SCLT1-207ENST00000506233 COL4A1P02462 1669 aa7.69□□□□□ -1.18
SCLT1-207ENST00000506233 AP1G2O75843 785 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 ATG7O95352 703 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 SEC24BO95487 1268 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 ALG2Q9H553 416 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
SCLT1-207ENST00000506233 C8orf58Q8NAV2 365 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms