RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
TRIM6-208ENST00000506134 UBR2Q8IWV8 1755 aa12.76□□□□□ -0.37
TRIM6-208ENST00000506134 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
TRIM6-208ENST00000506134 TSPYL6Q8N831 410 aa12.75□□□□□ -0.37
TRIM6-208ENST00000506134 LINC00116Q8NCU8 138 aa12.75□□□□□ -0.37
TRIM6-208ENST00000506134 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
TRIM6-208ENST00000506134 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
TRIM6-208ENST00000506134 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
TRIM6-208ENST00000506134 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
TRIM6-208ENST00000506134 DSG3P32926 999 aa12.73□□□□□ -0.37
TRIM6-208ENST00000506134 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
TRIM6-208ENST00000506134 STARD3NLO95772 234 aa12.72□□□□□ -0.37
TRIM6-208ENST00000506134 A1BGP04217 495 aa12.72□□□□□ -0.37
TRIM6-208ENST00000506134 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
TRIM6-208ENST00000506134 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
TRIM6-208ENST00000506134 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
TRIM6-208ENST00000506134 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
TRIM6-208ENST00000506134 VAMP4O75379 141 aa12.71□□□□□ -0.37
TRIM6-208ENST00000506134 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
TRIM6-208ENST00000506134 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.37
TRIM6-208ENST00000506134 SMIM5Q71RC9 77 aa12.71□□□□□ -0.37
TRIM6-208ENST00000506134 TJP1Q07157 1748 aa12.71□□□□□ -0.38
TRIM6-208ENST00000506134 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.38
TRIM6-208ENST00000506134 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
TRIM6-208ENST00000506134 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
TRIM6-208ENST00000506134 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
TRIM6-208ENST00000506134 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
TRIM6-208ENST00000506134 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
TRIM6-208ENST00000506134 C5P01031 1676 aa12.7□□□□□ -0.38
TRIM6-208ENST00000506134 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
TRIM6-208ENST00000506134 HOXB7P09629 217 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
TRIM6-208ENST00000506134 NBPF14Q5TI25 921 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
TRIM6-208ENST00000506134 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
TRIM6-208ENST00000506134 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
TRIM6-208ENST00000506134 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 GNPATO15228 680 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
TRIM6-208ENST00000506134 PDIA6Q15084 440 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 ZBTB1Q9Y2K1 713 aa12.69□□□□□ -0.38
TRIM6-208ENST00000506134 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
TRIM6-208ENST00000506134 RREB1Q92766 1687 aa12.68□□□□□ -0.38
TRIM6-208ENST00000506134 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
TRIM6-208ENST00000506134 ANXA1P04083 346 aa12.68□□□□□ -0.38
TRIM6-208ENST00000506134 AK7Q96M32 723 aa12.68□□□□□ -0.38
TRIM6-208ENST00000506134 STK32BQ9NY57 414 aa12.68□□□□□ -0.38
TRIM6-208ENST00000506134 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
TRIM6-208ENST00000506134 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
TRIM6-208ENST00000506134 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
TRIM6-208ENST00000506134 MYL6BP14649 208 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 CCDC30Q5VVM6 783 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 TFCP2L1Q9NZI6 479 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 CHPF2Q9P2E5 772 aa12.67□□□□□ -0.38
TRIM6-208ENST00000506134 PHF14O94880 888 aa12.66□□□□□ -0.38
TRIM6-208ENST00000506134 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
TRIM6-208ENST00000506134 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
TRIM6-208ENST00000506134 ZNF330Q9Y3S2 320 aaPredicted RBP12.66□□□□□ -0.38
TRIM6-208ENST00000506134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
TRIM6-208ENST00000506134 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
TRIM6-208ENST00000506134 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
TRIM6-208ENST00000506134 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
TRIM6-208ENST00000506134 COL23A1Q86Y22 540 aaPredicted RBP12.65□□□□□ -0.38
TRIM6-208ENST00000506134 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
TRIM6-208ENST00000506134 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM6-208ENST00000506134 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
TRIM6-208ENST00000506134 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
TRIM6-208ENST00000506134 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
TRIM6-208ENST00000506134 ARXQ96QS3 562 aa12.64□□□□□ -0.39
TRIM6-208ENST00000506134 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
TRIM6-208ENST00000506134 ERBB4Q15303 1308 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
TRIM6-208ENST00000506134 ABCB7O75027 752 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
TRIM6-208ENST00000506134 AIMP1Q12904 312 aaKnown RBP12.63□□□□□ -0.39
TRIM6-208ENST00000506134 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 G2E3Q7L622 706 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 STK31Q9BXU1 1019 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
TRIM6-208ENST00000506134 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
TRIM6-208ENST00000506134 SSFA2P28290 1259 aa12.62□□□□□ -0.39
TRIM6-208ENST00000506134 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
TRIM6-208ENST00000506134 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
TRIM6-208ENST00000506134 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
TRIM6-208ENST00000506134 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
TRIM6-208ENST00000506134 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
TRIM6-208ENST00000506134 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
TRIM6-208ENST00000506134 A0A087WZG4 1122 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms