RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 CRISPLD1Q9H336 500 aa10.72□□□□□ -0.69
CHD1-204ENST00000505982 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.69
CHD1-204ENST00000505982 BAG6P46379 1132 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 TLR1Q15399 786 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 SLFNL1Q499Z3 407 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 SLCO4C1Q6ZQN7 724 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 ADAMTS19Q8TE59 1207 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 ETNK1Q9HBU6 452 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
CHD1-204ENST00000505982 ACIN1Q9UKV3 1341 aaKnown RBP10.71□□□□□ -0.69
CHD1-204ENST00000505982 C2CD2LO14523 706 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 BNIP3LO60238 219 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 RFX1P22670 979 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 COL8A1P27658 744 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 FIGNL1Q6PIW4 674 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 PHTF2Q8N3S3 785 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 NDFIP2Q9NV92 336 aa10.7□□□□□ -0.7
CHD1-204ENST00000505982 CTBSQ01459 385 aa10.69□□□□□ -0.7
CHD1-204ENST00000505982 TSGA10IPQ3SY00 556 aa10.69□□□□□ -0.7
CHD1-204ENST00000505982 XP32Q5T750 250 aa10.69□□□□□ -0.7
CHD1-204ENST00000505982 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
CHD1-204ENST00000505982 SOX11P35716 441 aa10.68□□□□□ -0.7
CHD1-204ENST00000505982 SEMA3FQ13275 785 aa10.68□□□□□ -0.7
CHD1-204ENST00000505982 GRIN2CQ14957 1233 aa10.68□□□□□ -0.7
CHD1-204ENST00000505982 LINC00114Q6XXX2 140 aa10.68□□□□□ -0.7
CHD1-204ENST00000505982 TBC1D9Q6ZT07 1266 aa10.68□□□□□ -0.7
CHD1-204ENST00000505982 RNF135Q8IUD6 432 aa10.68□□□□□ -0.7
CHD1-204ENST00000505982 GNB5O14775 395 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 STAU1O95793 577 aaKnown RBP10.66□□□□□ -0.7
CHD1-204ENST00000505982 ARAFP10398 606 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 PLA2G4AP47712 749 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 C1orf216Q8TAB5 229 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 BTBD6Q96KE9 485 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 ALG2Q9H553 416 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 PCDHGC4Q9Y5F7 938 aa10.66□□□□□ -0.7
CHD1-204ENST00000505982 EPXP11678 715 aa10.65□□□□□ -0.7
CHD1-204ENST00000505982 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
CHD1-204ENST00000505982 PBXIP1Q96AQ6 731 aa10.65□□□□□ -0.7
CHD1-204ENST00000505982 PPP1R12CQ9BZL4 782 aa10.65□□□□□ -0.7
CHD1-204ENST00000505982 ZCCHC2Q9C0B9 1178 aaKnown RBP10.65□□□□□ -0.7
CHD1-204ENST00000505982 SUV39H2Q9H5I1 410 aa10.65□□□□□ -0.7
CHD1-204ENST00000505982 NLRP8Q86W28 1048 aa10.64□□□□□ -0.71
CHD1-204ENST00000505982 NIFKQ9BYG3 293 aaKnown RBP10.64□□□□□ -0.71
CHD1-204ENST00000505982 NOP53Q9NZM5 478 aaKnown RBP10.64□□□□□ -0.71
CHD1-204ENST00000505982 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.63□□□□□ -0.71
CHD1-204ENST00000505982 INHAP05111 366 aa10.63□□□□□ -0.71
CHD1-204ENST00000505982 FURINP09958 794 aa10.63□□□□□ -0.71
CHD1-204ENST00000505982 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
CHD1-204ENST00000505982 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
CHD1-204ENST00000505982 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
CHD1-204ENST00000505982 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
CHD1-204ENST00000505982 NEURL1BA8MQ27 555 aa10.62□□□□□ -0.71
CHD1-204ENST00000505982 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
CHD1-204ENST00000505982 GDF10P55107 478 aa10.62□□□□□ -0.71
CHD1-204ENST00000505982 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
CHD1-204ENST00000505982 ATXN7O15265 892 aaPredicted RBP10.61□□□□□ -0.71
CHD1-204ENST00000505982 SCNN1DP51172 638 aa10.61□□□□□ -0.71
CHD1-204ENST00000505982 PDE4CQ08493 712 aa10.61□□□□□ -0.71
CHD1-204ENST00000505982 DNAAF2Q9NVR5 837 aaKnown RBP10.61□□□□□ -0.71
CHD1-204ENST00000505982 DGKGP49619 791 aa10.6□□□□□ -0.71
CHD1-204ENST00000505982 SMTNP53814 917 aa10.6□□□□□ -0.71
CHD1-204ENST00000505982 MAP7D1Q3KQU3 841 aa10.6□□□□□ -0.71
CHD1-204ENST00000505982 TFIP11Q9UBB9 837 aaKnown RBP10.6□□□□□ -0.71
CHD1-204ENST00000505982 C1QTNF9BB2RNN3 333 aa10.59□□□□□ -0.71
CHD1-204ENST00000505982 ATP4AP20648 1035 aa10.59□□□□□ -0.71
CHD1-204ENST00000505982 ADH6P28332 368 aa10.59□□□□□ -0.71
CHD1-204ENST00000505982 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
CHD1-204ENST00000505982 ARSJQ5FYB0 599 aaPredicted RBP10.59□□□□□ -0.71
CHD1-204ENST00000505982 FAM182BQ5T319 152 aa10.59□□□□□ -0.71
CHD1-204ENST00000505982 UCN2Q96RP3 112 aa10.59□□□□□ -0.71
CHD1-204ENST00000505982 AVENQ9NQS1 362 aaPredicted RBP10.58□□□□□ -0.72
CHD1-204ENST00000505982 A0A1W2PNR3 127 aa10.57□□□□□ -0.72
CHD1-204ENST00000505982 MAPTP10636 758 aaKnown RBP10.57□□□□□ -0.72
CHD1-204ENST00000505982 TATP17735 454 aaPredicted RBP10.57□□□□□ -0.72
CHD1-204ENST00000505982 TNP2Q05952 138 aa10.57□□□□□ -0.72
CHD1-204ENST00000505982 CHSY3Q70JA7 882 aa10.57□□□□□ -0.72
CHD1-204ENST00000505982 CD163Q86VB7 1156 aa10.57□□□□□ -0.72
CHD1-204ENST00000505982 DCDC2BA2VCK2 349 aa10.56□□□□□ -0.72
CHD1-204ENST00000505982 KHNYNO15037 678 aaKnown RBP10.56□□□□□ -0.72
CHD1-204ENST00000505982 CD33P20138 364 aa10.55□□□□□ -0.72
CHD1-204ENST00000505982 PLPP7Q8NBV4 271 aa10.55□□□□□ -0.72
CHD1-204ENST00000505982 ZDHHC3Q9NYG2 299 aa10.55□□□□□ -0.72
CHD1-204ENST00000505982 SERTAD1Q9UHV2 236 aa10.55□□□□□ -0.72
CHD1-204ENST00000505982 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
CHD1-204ENST00000505982 CDK2AP1O14519 115 aa10.54□□□□□ -0.72
CHD1-204ENST00000505982 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
CHD1-204ENST00000505982 Q8N3U1 123 aa10.54□□□□□ -0.72
CHD1-204ENST00000505982 SLC4A9Q96Q91 983 aa10.54□□□□□ -0.72
CHD1-204ENST00000505982 MAFBQ9Y5Q3 323 aaPredicted RBP10.54□□□□□ -0.72
CHD1-204ENST00000505982 A6NJY4 79 aa10.53□□□□□ -0.72
CHD1-204ENST00000505982 CHRNA4P43681 627 aa10.53□□□□□ -0.72
CHD1-204ENST00000505982 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
CHD1-204ENST00000505982 KLF15Q9UIH9 416 aa10.53□□□□□ -0.72
CHD1-204ENST00000505982 PRR12Q9ULL5 1215 aa10.53□□□□□ -0.72
CHD1-204ENST00000505982 ATP9BO43861 1147 aa10.52□□□□□ -0.73
CHD1-204ENST00000505982 MTFR1Q15390 333 aa10.52□□□□□ -0.73
CHD1-204ENST00000505982 ZIC5Q96T25 663 aa10.52□□□□□ -0.73
CHD1-204ENST00000505982 CABP1Q9NZU7 370 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms