RNA–Protein interactions for RNA: ENST00000505911.5

TCP11-222, Transcript of t-complex 11, human

TSL 1 (best)

Gene TCP11, Length 1,974 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-222	ENST00000505911	NPM2	Q86SE8	214 aa	Known RBP	18.94	■□□□□ 0.62
TCP11-222	ENST00000505911	QSER1	Q2KHR3	1735 aa		18.94	■□□□□ 0.62
TCP11-222	ENST00000505911	GIGYF1	O75420	1035 aa	Predicted RBP	18.93	■□□□□ 0.62
TCP11-222	ENST00000505911	IL16	Q14005	1332 aa		18.93	■□□□□ 0.62
TCP11-222	ENST00000505911	PHF14	O94880	888 aa		18.93	■□□□□ 0.62
TCP11-222	ENST00000505911	ZNF853	P0CG23	659 aa		18.93	■□□□□ 0.62
TCP11-222	ENST00000505911	RFC4	P35249	363 aa		18.92	■□□□□ 0.62
TCP11-222	ENST00000505911	CHMP4A	Q9BY43	222 aa		18.92	■□□□□ 0.62
TCP11-222	ENST00000505911	USP16	Q9Y5T5	823 aa		18.92	■□□□□ 0.62
TCP11-222	ENST00000505911	COL5A3	P25940	1745 aa	Predicted RBP	18.92	■□□□□ 0.62
TCP11-222	ENST00000505911	TJP1	Q07157	1748 aa		18.92	■□□□□ 0.62
TCP11-222	ENST00000505911		A0A087WZG4	1122 aa		18.92	■□□□□ 0.62
TCP11-222	ENST00000505911	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.92	■□□□□ 0.62
TCP11-222	ENST00000505911	ZBTB7A	O95365	584 aa		18.91	■□□□□ 0.62
TCP11-222	ENST00000505911	ARHGEF1	Q92888	912 aa	Known RBP	18.91	■□□□□ 0.62
TCP11-222	ENST00000505911	CANX	P27824	592 aa	Known RBP	18.9	■□□□□ 0.62
TCP11-222	ENST00000505911	IL6ST	P40189	918 aa	Predicted RBP	18.9	■□□□□ 0.62
TCP11-222	ENST00000505911	SALL2	Q9Y467	1007 aa	Predicted RBP	18.9	■□□□□ 0.62
TCP11-222	ENST00000505911	KDM3B	Q7LBC6	1761 aa		18.9	■□□□□ 0.62
TCP11-222	ENST00000505911	MBIP	Q9NS73	344 aa		18.9	■□□□□ 0.62
TCP11-222	ENST00000505911	ZBTB1	Q9Y2K1	713 aa		18.9	■□□□□ 0.62
TCP11-222	ENST00000505911	SOS1	Q07889	1333 aa	Predicted RBP	18.89	■□□□□ 0.61
TCP11-222	ENST00000505911	HOXB7	P09629	217 aa		18.89	■□□□□ 0.61
TCP11-222	ENST00000505911	POLD1	P28340	1107 aa		18.89	■□□□□ 0.61
TCP11-222	ENST00000505911	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.89	■□□□□ 0.61
TCP11-222	ENST00000505911	CASZ1	Q86V15	1759 aa		18.89	■□□□□ 0.61
TCP11-222	ENST00000505911	UBR3	Q6ZT12	1888 aa		18.89	■□□□□ 0.61
TCP11-222	ENST00000505911	NLGN1	Q8N2Q7	840 aa		18.88	■□□□□ 0.61
TCP11-222	ENST00000505911	ZPR1	O75312	459 aa		18.88	■□□□□ 0.61
TCP11-222	ENST00000505911	A1BG	P04217	495 aa		18.88	■□□□□ 0.61
TCP11-222	ENST00000505911	EIF5	P55010	431 aa	Known RBP	18.88	■□□□□ 0.61
TCP11-222	ENST00000505911	ERBB4	Q15303	1308 aa		18.87	■□□□□ 0.61
TCP11-222	ENST00000505911	PRAMEF22	A3QJZ6	481 aa		18.87	■□□□□ 0.61
TCP11-222	ENST00000505911	AMIGO3	Q86WK7	504 aa		18.87	■□□□□ 0.61
TCP11-222	ENST00000505911	SENP3-EIF4A1	A0A087X0R7	540 aa		18.86	■□□□□ 0.61
TCP11-222	ENST00000505911	MYH14	Q7Z406	1995 aa	Known RBP	18.86	■□□□□ 0.61
TCP11-222	ENST00000505911	TUBGCP6	Q96RT7	1819 aa		18.85	■□□□□ 0.61
TCP11-222	ENST00000505911	MYH16	Q9H6N6	1097 aa		18.85	■□□□□ 0.61
TCP11-222	ENST00000505911	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.85	■□□□□ 0.61
TCP11-222	ENST00000505911	NARF	Q9UHQ1	456 aa		18.85	■□□□□ 0.61
TCP11-222	ENST00000505911	COL15A1	P39059	1388 aa		18.85	■□□□□ 0.61
TCP11-222	ENST00000505911	SMIM5	Q71RC9	77 aa		18.84	■□□□□ 0.61
TCP11-222	ENST00000505911	DUSP27	Q5VZP5	1158 aa		18.84	■□□□□ 0.61
TCP11-222	ENST00000505911	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.84	■□□□□ 0.61
TCP11-222	ENST00000505911	USP42	Q9H9J4	1324 aa	Known RBP	18.84	■□□□□ 0.61
TCP11-222	ENST00000505911	EIF2S2	P20042	333 aa	Known RBP	18.83	■□□□□ 0.61
TCP11-222	ENST00000505911	PTGER2	P43116	358 aa		18.83	■□□□□ 0.61
TCP11-222	ENST00000505911	GOLGA2	Q08379	1002 aa		18.83	■□□□□ 0.61
TCP11-222	ENST00000505911	LRP5	O75197	1615 aa		18.82	■□□□□ 0.6
TCP11-222	ENST00000505911	GYS1	P13807	737 aa		18.82	■□□□□ 0.6
TCP11-222	ENST00000505911	ARX	Q96QS3	562 aa		18.82	■□□□□ 0.6
TCP11-222	ENST00000505911	SGIP1	Q9BQI5	828 aa		18.82	■□□□□ 0.6
TCP11-222	ENST00000505911	NBPF26	B4DH59	902 aa		18.81	■□□□□ 0.6
TCP11-222	ENST00000505911	RGL2	O15211	777 aa		18.81	■□□□□ 0.6
TCP11-222	ENST00000505911	NBPF10	Q6P3W6	841 aa	Known RBP	18.81	■□□□□ 0.6
TCP11-222	ENST00000505911	NBPF15	Q8N660	670 aa		18.81	■□□□□ 0.6
TCP11-222	ENST00000505911	ZNF521	Q96K83	1311 aa		18.81	■□□□□ 0.6
TCP11-222	ENST00000505911	HDGFL1	Q5TGJ6	251 aa		18.81	■□□□□ 0.6
TCP11-222	ENST00000505911	USPL1	Q5W0Q7	1092 aa		18.8	■□□□□ 0.6
TCP11-222	ENST00000505911	MSL1	Q68DK7	614 aa		18.8	■□□□□ 0.6
TCP11-222	ENST00000505911	DZIP3	Q86Y13	1208 aa	Known RBP	18.8	■□□□□ 0.6
TCP11-222	ENST00000505911	TSR2	Q969E8	191 aa	Known RBP	18.8	■□□□□ 0.6
TCP11-222	ENST00000505911	KRT24	Q2M2I5	525 aa		18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	DBF4	Q9UBU7	674 aa	Predicted RBP	18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	SRP68	Q9UHB9	627 aa	Known RBP	18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	LAMB4	A4D0S4	1761 aa		18.79	■□□□□ 0.6
TCP11-222	ENST00000505911		E9PSI1	815 aa		18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	TBC1D2B	Q9UPU7	963 aa		18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	ZNF652	Q9Y2D9	606 aa		18.79	■□□□□ 0.6
TCP11-222	ENST00000505911	MYL6B	P14649	208 aa		18.78	■□□□□ 0.6
TCP11-222	ENST00000505911	CLEC4G	Q6UXB4	293 aa		18.78	■□□□□ 0.6
TCP11-222	ENST00000505911	C8orf58	Q8NAV2	365 aa		18.78	■□□□□ 0.6
TCP11-222	ENST00000505911	FANCI	Q9NVI1	1328 aa		18.78	■□□□□ 0.6
TCP11-222	ENST00000505911	ELL2	O00472	640 aa	Predicted RBP	18.77	■□□□□ 0.6
TCP11-222	ENST00000505911	PIP4K2A	P48426	406 aa	Predicted RBP	18.77	■□□□□ 0.6
TCP11-222	ENST00000505911	CCDC30	Q5VVM6	783 aa		18.77	■□□□□ 0.6
TCP11-222	ENST00000505911	PARP3	Q9Y6F1	533 aa		18.77	■□□□□ 0.6
TCP11-222	ENST00000505911	TWISTNB	Q3B726	338 aa	Predicted RBP	18.77	■□□□□ 0.59
TCP11-222	ENST00000505911	KIF6	Q6ZMV9	814 aa		18.77	■□□□□ 0.59
TCP11-222	ENST00000505911	HYPK	Q9NX55	129 aa		18.77	■□□□□ 0.59
TCP11-222	ENST00000505911	ERVV-1	B6SEH8	477 aa		18.76	■□□□□ 0.59
TCP11-222	ENST00000505911	MMP10	P09238	476 aa		18.76	■□□□□ 0.59
TCP11-222	ENST00000505911	FKBP8	Q14318	412 aa		18.76	■□□□□ 0.59
TCP11-222	ENST00000505911	PDIA6	Q15084	440 aa		18.75	■□□□□ 0.59
TCP11-222	ENST00000505911	NECTIN2	Q92692	538 aa		18.75	■□□□□ 0.59
TCP11-222	ENST00000505911	COL24A1	Q17RW2	1714 aa		18.75	■□□□□ 0.59
TCP11-222	ENST00000505911	CAMTA2	O94983	1202 aa		18.75	■□□□□ 0.59
TCP11-222	ENST00000505911	TM4SF1	P30408	202 aa		18.75	■□□□□ 0.59
TCP11-222	ENST00000505911	STK31	Q9BXU1	1019 aa		18.74	■□□□□ 0.59
TCP11-222	ENST00000505911	C4A	P0C0L4	1744 aa		18.74	■□□□□ 0.59
TCP11-222	ENST00000505911	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	EXOSC9	Q06265	439 aa	Known RBP	18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	SLFN5	Q08AF3	891 aa		18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	BCL2L12	Q9HB09	334 aa		18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	CHPF2	Q9P2E5	772 aa		18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	TSPYL6	Q8N831	410 aa		18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	CD2AP	Q9Y5K6	639 aa		18.73	■□□□□ 0.59
TCP11-222	ENST00000505911	MAP3K15	Q6ZN16	1313 aa		18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms