RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 BAG4O95429 457 aaKnown RBP20.79■□□□□ 0.92
LIN54-204ENST00000505397 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
LIN54-204ENST00000505397 CHMP4AQ9BY43 222 aa20.78■□□□□ 0.92
LIN54-204ENST00000505397 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
LIN54-204ENST00000505397 NECTIN2Q92692 538 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 SALL3Q9BXA9 1300 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 MEGF6O75095 1541 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 F6X3S4 739 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 REC8O95072 547 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 NUCB2P80303 420 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
LIN54-204ENST00000505397 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.91
LIN54-204ENST00000505397 GOLGA6L22H0YM25 854 aa20.77■□□□□ 0.91
LIN54-204ENST00000505397 CLCN1P35523 988 aa20.77■□□□□ 0.91
LIN54-204ENST00000505397 PDE1AP54750 535 aa20.77■□□□□ 0.91
LIN54-204ENST00000505397 KLHL40Q2TBA0 621 aa20.77■□□□□ 0.91
LIN54-204ENST00000505397 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
LIN54-204ENST00000505397 ADAMTS7Q9UKP4 1686 aa20.76■□□□□ 0.91
LIN54-204ENST00000505397 SIPA1L3O60292 1781 aaPredicted RBP20.76■□□□□ 0.91
LIN54-204ENST00000505397 APBB1O00213 710 aa20.76■□□□□ 0.91
LIN54-204ENST00000505397 CWC22Q9HCG8 908 aaKnown RBP20.76■□□□□ 0.91
LIN54-204ENST00000505397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.915e-8■□□□□ 10.8
LIN54-204ENST00000505397 ERC2O15083 957 aa20.75■□□□□ 0.91
LIN54-204ENST00000505397 HOXB7P09629 217 aa20.75■□□□□ 0.91
LIN54-204ENST00000505397 FLIIQ13045 1269 aa20.75■□□□□ 0.91
LIN54-204ENST00000505397 SCN11AQ9UI33 1791 aa20.75■□□□□ 0.91
LIN54-204ENST00000505397 GNAI2P04899 355 aa20.75■□□□□ 0.91
LIN54-204ENST00000505397 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
LIN54-204ENST00000505397 SLC4A10Q6U841 1118 aa20.74■□□□□ 0.91
LIN54-204ENST00000505397 ST18O60284 1047 aa20.74■□□□□ 0.91
LIN54-204ENST00000505397 N4BP2Q86UW6 1770 aaPredicted RBP20.74■□□□□ 0.91
LIN54-204ENST00000505397 PKD1L3Q7Z443 1732 aa20.74■□□□□ 0.91
LIN54-204ENST00000505397 WDR17Q8IZU2 1322 aa20.73■□□□□ 0.91
LIN54-204ENST00000505397 IFNL2Q8IZJ0 200 aa20.73■□□□□ 0.91
LIN54-204ENST00000505397 PARP4Q9UKK3 1724 aaKnown RBP20.72■□□□□ 0.91
LIN54-204ENST00000505397 AK9Q5TCS8 1911 aa20.72■□□□□ 0.91
LIN54-204ENST00000505397 PHKG2P15735 406 aa20.72■□□□□ 0.91
LIN54-204ENST00000505397 EIF2S2P20042 333 aaKnown RBP20.72■□□□□ 0.91
LIN54-204ENST00000505397 TOM1L2Q6ZVM7 507 aa20.72■□□□□ 0.91
LIN54-204ENST00000505397 COL5A2P05997 1499 aaPredicted RBP20.71■□□□□ 0.91
LIN54-204ENST00000505397 KCNQ3O43525 872 aa20.71■□□□□ 0.91
LIN54-204ENST00000505397 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.9
LIN54-204ENST00000505397 GNAI3P08754 354 aa20.7■□□□□ 0.9
LIN54-204ENST00000505397 ATP8B2P98198 1209 aa20.7■□□□□ 0.9
LIN54-204ENST00000505397 PXDNLA1KZ92 1463 aa20.7■□□□□ 0.9
LIN54-204ENST00000505397 DDX49Q9Y6V7 483 aaKnown RBP20.69■□□□□ 0.9
LIN54-204ENST00000505397 PKP1Q13835 747 aa20.69■□□□□ 0.9
LIN54-204ENST00000505397 LMBRD1Q9NUN5 540 aa20.69■□□□□ 0.9
LIN54-204ENST00000505397 EXOC6BQ9Y2D4 811 aa20.69■□□□□ 0.9
LIN54-204ENST00000505397 KDM6AO15550 1401 aaPredicted RBP20.69■□□□□ 0.9
LIN54-204ENST00000505397 LRRCC1Q9C099 1032 aa20.69■□□□□ 0.9
LIN54-204ENST00000505397 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
LIN54-204ENST00000505397 SLC52A2Q9HAB3 445 aa20.68■□□□□ 0.9
LIN54-204ENST00000505397 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 ZNF445P59923 1031 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 ZDHHC9Q9Y397 364 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 IL17RAQ96F46 866 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
LIN54-204ENST00000505397 ESYT1Q9BSJ8 1104 aa20.66■□□□□ 0.9
LIN54-204ENST00000505397 CHPF2Q9P2E5 772 aa20.66■□□□□ 0.9
LIN54-204ENST00000505397 ESPNB1AK53 854 aa20.66■□□□□ 0.9
LIN54-204ENST00000505397 MX1P20591 662 aa20.66■□□□□ 0.9
LIN54-204ENST00000505397 EVA1CP58658 441 aa20.66■□□□□ 0.9
LIN54-204ENST00000505397 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
LIN54-204ENST00000505397 CYP27B1O15528 508 aa20.65■□□□□ 0.9
LIN54-204ENST00000505397 PPP1R9BQ96SB3 815 aa20.65■□□□□ 0.9
LIN54-204ENST00000505397 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
LIN54-204ENST00000505397 GIGYF1O75420 1035 aaPredicted RBP20.64■□□□□ 0.9
LIN54-204ENST00000505397 PHAXQ9H814 394 aaKnown RBP20.64■□□□□ 0.9
LIN54-204ENST00000505397 AHDC1Q5TGY3 1603 aaPredicted RBP20.64■□□□□ 0.89
LIN54-204ENST00000505397 DBF4Q9UBU7 674 aaPredicted RBP20.64■□□□□ 0.89
LIN54-204ENST00000505397 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.89
LIN54-204ENST00000505397 MRC1P22897 1456 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 PCDH11XQ9BZA7 1347 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 PCDH11YQ9BZA8 1340 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 CARD10Q9BWT7 1032 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 ANAPC15P60006 121 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 ZNF790Q6PG37 636 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 NFATC2IPQ8NCF5 419 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 SRCIN1Q9C0H9 1055 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 AOX1Q06278 1338 aa20.63■□□□□ 0.89
LIN54-204ENST00000505397 CHMLP26374 656 aa20.62■□□□□ 0.89
LIN54-204ENST00000505397 MCM2P49736 904 aa20.62■□□□□ 0.89
LIN54-204ENST00000505397 CCDC173Q0VFZ6 552 aa20.62■□□□□ 0.89
LIN54-204ENST00000505397 TSHZ3Q63HK5 1081 aa20.62■□□□□ 0.89
LIN54-204ENST00000505397 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
LIN54-204ENST00000505397 IL2RBP14784 551 aa20.62■□□□□ 0.89
LIN54-204ENST00000505397 ZCRB1Q8TBF4 217 aaKnown RBP20.62■□□□□ 0.89
LIN54-204ENST00000505397 NASPP49321 788 aaPredicted RBP20.61■□□□□ 0.89
LIN54-204ENST00000505397 CUL4AQ13619 759 aa20.61■□□□□ 0.89
LIN54-204ENST00000505397 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
LIN54-204ENST00000505397 TMX3Q96JJ7 454 aa20.61■□□□□ 0.89
LIN54-204ENST00000505397 LRRFIP2Q9Y608 721 aaKnown RBP20.61■□□□□ 0.89
LIN54-204ENST00000505397 NEK4P51957 841 aa20.61■□□□□ 0.89
LIN54-204ENST00000505397 SLC39A6Q13433 755 aa20.6■□□□□ 0.89
LIN54-204ENST00000505397 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms